RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 LILRB3O75022 631 aa17.41■□□□□ 0.38
SNRPB-202ENST00000438552 CNPP09543 421 aaKnown RBP17.41■□□□□ 0.38
SNRPB-202ENST00000438552 RBP5P82980 135 aa17.41■□□□□ 0.38
SNRPB-202ENST00000438552 BIRC3Q13489 604 aa17.41■□□□□ 0.38
SNRPB-202ENST00000438552 SKIV2LQ15477 1246 aaKnown RBP17.41■□□□□ 0.38
SNRPB-202ENST00000438552 PSMD5Q16401 504 aa17.41■□□□□ 0.38
SNRPB-202ENST00000438552 STX1AQ16623 288 aa17.41■□□□□ 0.38
SNRPB-202ENST00000438552 DUSP6Q16828 381 aa17.41■□□□□ 0.38
SNRPB-202ENST00000438552 CCDC40Q4G0X9 1142 aa17.41■□□□□ 0.38
SNRPB-202ENST00000438552 DCAF17Q5H9S7 520 aaPredicted RBP17.41■□□□□ 0.38
SNRPB-202ENST00000438552 USP37Q86T82 979 aa17.41■□□□□ 0.38
SNRPB-202ENST00000438552 GLYCTKQ8IVS8 523 aa17.41■□□□□ 0.38
SNRPB-202ENST00000438552 LRRC52Q8N7C0 313 aa17.41■□□□□ 0.38
SNRPB-202ENST00000438552 PIK3R5Q8WYR1 880 aa17.41■□□□□ 0.38
SNRPB-202ENST00000438552 SENP8Q96LD8 212 aa17.41■□□□□ 0.38
SNRPB-202ENST00000438552 MMRN2Q9H8L6 949 aa17.41■□□□□ 0.38
SNRPB-202ENST00000438552 TIMM13Q9Y5L4 95 aaPredicted RBP17.41■□□□□ 0.38
SNRPB-202ENST00000438552 SYN3O14994 580 aa17.4■□□□□ 0.38
SNRPB-202ENST00000438552 CLASP2O75122 1294 aaKnown RBP17.4■□□□□ 0.38
SNRPB-202ENST00000438552 PHACTR2O75167 634 aa17.4■□□□□ 0.38
SNRPB-202ENST00000438552 ODC1P11926 461 aa17.4■□□□□ 0.38
SNRPB-202ENST00000438552 PNPLA4P41247 253 aa17.4■□□□□ 0.38
SNRPB-202ENST00000438552 RBM10P98175 930 aaKnown RBP17.4■□□□□ 0.38
SNRPB-202ENST00000438552 PPP3CAQ08209 521 aa17.4■□□□□ 0.38
SNRPB-202ENST00000438552 VARS2Q5ST30 1063 aaKnown RBP17.4■□□□□ 0.38
SNRPB-202ENST00000438552 TCERG1LQ5VWI1 586 aa17.4■□□□□ 0.38
SNRPB-202ENST00000438552 LLGL2Q6P1M3 1020 aa17.4■□□□□ 0.38
SNRPB-202ENST00000438552 C11orf57Q6ZUT1 292 aaPredicted RBP17.4■□□□□ 0.38
SNRPB-202ENST00000438552 VN1R2Q8NFZ6 395 aa17.4■□□□□ 0.38
SNRPB-202ENST00000438552 LNX1Q8TBB1 728 aaPredicted RBP17.4■□□□□ 0.38
SNRPB-202ENST00000438552 KLHL5Q96PQ7 755 aa17.4■□□□□ 0.38
SNRPB-202ENST00000438552 SRRTQ9BXP5 876 aaKnown RBP17.4■□□□□ 0.38
SNRPB-202ENST00000438552 EMILIN2Q9BXX0 1053 aa17.4■□□□□ 0.38
SNRPB-202ENST00000438552 ARMCX3Q9UH62 379 aaPredicted RBP17.4■□□□□ 0.38
SNRPB-202ENST00000438552 SSX2IPQ9Y2D8 614 aa17.4■□□□□ 0.38
SNRPB-202ENST00000438552 KPNA7A9QM74 516 aa17.39■□□□□ 0.37
SNRPB-202ENST00000438552 TEX28O15482 410 aa17.39■□□□□ 0.37
SNRPB-202ENST00000438552 VNN1O95497 513 aa17.39■□□□□ 0.37
SNRPB-202ENST00000438552 GLP2RO95838 553 aa17.39■□□□□ 0.37
SNRPB-202ENST00000438552 CST3P01034 146 aaPredicted RBP17.39■□□□□ 0.37
SNRPB-202ENST00000438552 C4BPAP04003 597 aaKnown RBP17.39■□□□□ 0.37
SNRPB-202ENST00000438552 GCLMP48507 274 aa17.39■□□□□ 0.37
SNRPB-202ENST00000438552 AP3M2P53677 418 aa17.39■□□□□ 0.37
SNRPB-202ENST00000438552 TYRO3Q06418 890 aa17.39■□□□□ 0.37
SNRPB-202ENST00000438552 ENPEPQ07075 957 aa17.39■□□□□ 0.37
SNRPB-202ENST00000438552 ZACNQ401N2 412 aa17.39■□□□□ 0.37
SNRPB-202ENST00000438552 SV2AQ7L0J3 742 aa17.39■□□□□ 0.37
SNRPB-202ENST00000438552 FILIP1Q7Z7B0 1213 aa17.39■□□□□ 0.37
SNRPB-202ENST00000438552 ELMO3Q96BJ8 720 aa17.39■□□□□ 0.37
SNRPB-202ENST00000438552 HPDLQ96IR7 371 aa17.39■□□□□ 0.37
SNRPB-202ENST00000438552 RXFP1Q9HBX9 757 aa17.39■□□□□ 0.37
SNRPB-202ENST00000438552 PRDM6Q9NQX0 595 aa17.39■□□□□ 0.37
SNRPB-202ENST00000438552 MTRRQ9UBK8 725 aa17.39■□□□□ 0.37
SNRPB-202ENST00000438552 R3HCC1Q9Y3T6 440 aaKnown RBP17.39■□□□□ 0.37
SNRPB-202ENST00000438552 BRWD1Q9NSI6 2320 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 CYB561D2O14569 222 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 IKBKBO14920 756 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 ADAM12O43184 909 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 CLSTN1O94985 981 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 KLRC2P26717 231 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 ERCC5P28715 1186 aaPredicted RBP17.38■□□□□ 0.37
SNRPB-202ENST00000438552 PIK3CAP42336 1068 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 NDUFV1P49821 464 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 MYL6P60660 151 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 CREMQ03060 361 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 TRPC3Q13507 836 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 NCOA4Q13772 614 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 NFKBIBQ15653 356 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 PDXDC1Q6P996 788 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 RSPO2Q6UXX9 243 aaPredicted RBP17.38■□□□□ 0.37
SNRPB-202ENST00000438552 C15orf39Q6ZRI6 1047 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 EP400NLQ6ZTU2 488 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 ANKS3Q6ZW76 656 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 GPR65Q8IYL9 337 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 EFHBQ8N7U6 833 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 APPL2Q8NEU8 664 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 CDCA3Q99618 268 aaPredicted RBP17.38■□□□□ 0.37
SNRPB-202ENST00000438552 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.38■□□□□ 0.373e-10■■■□□ 15.1
SNRPB-202ENST00000438552 ANO10Q9NW15 660 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 CLDND1Q9NY35 253 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 FNIP2Q9P278 1114 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 MTCL1Q9Y4B5 1905 aaKnown RBP17.38■□□□□ 0.37
SNRPB-202ENST00000438552 XIRP2A4UGR9 3374 aa17.38■□□□□ 0.37
SNRPB-202ENST00000438552 TBX10O75333 385 aa17.37■□□□□ 0.37
SNRPB-202ENST00000438552 HLA-DRAP01903 254 aa17.37■□□□□ 0.37
SNRPB-202ENST00000438552 ADH1AP07327 375 aa17.37■□□□□ 0.37
SNRPB-202ENST00000438552 EPCAMP16422 314 aa17.37■□□□□ 0.37
SNRPB-202ENST00000438552 PAX3P23760 479 aa17.37■□□□□ 0.37
SNRPB-202ENST00000438552 MXI1P50539 228 aa17.37■□□□□ 0.37
SNRPB-202ENST00000438552 YWHAHQ04917 246 aaPredicted RBP17.37■□□□□ 0.37
SNRPB-202ENST00000438552 MYO1EQ12965 1108 aa17.37■□□□□ 0.37
SNRPB-202ENST00000438552 COL19A1Q14993 1142 aa17.37■□□□□ 0.37
SNRPB-202ENST00000438552 TPD52L1Q16890 204 aaPredicted RBP17.37■□□□□ 0.37
SNRPB-202ENST00000438552 ZNF280DQ6N043 979 aa17.37■□□□□ 0.37
SNRPB-202ENST00000438552 FRMD5Q7Z6J6 570 aa17.37■□□□□ 0.37
SNRPB-202ENST00000438552 SLC35C1Q96A29 364 aa17.37■□□□□ 0.37
SNRPB-202ENST00000438552 PABPC5Q96DU9 382 aaKnown RBP17.37■□□□□ 0.37
SNRPB-202ENST00000438552 CNOT6LQ96LI5 555 aaKnown RBP17.37■□□□□ 0.37
SNRPB-202ENST00000438552 CLSTN3Q9BQT9 956 aa17.37■□□□□ 0.37
SNRPB-202ENST00000438552 XYLT2Q9H1B5 865 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms