RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 KLC1Q07866 573 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 KIF22Q14807 665 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 HSP90AA5PQ58FG0 334 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 SWT1Q5T5J6 900 aaKnown RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 RAPH1Q70E73 1250 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 BZW1Q7L1Q6 419 aaKnown RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 TTC16Q8NEE8 873 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 RBM46Q8TBY0 533 aaKnown RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 SLC5A5Q92911 643 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 TTC1Q99614 292 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 RPAP3Q9H6T3 665 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-205ENST00000438362 DNAJC18Q9H819 358 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 RXFP1Q9HBX9 757 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 WDR35Q9P2L0 1181 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 TMX2Q9Y320 296 aa7.05□□□□□ -1.28
CSDE1-205ENST00000438362 CCDC195A0A1B0GUA6 201 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 CRCPO75575 148 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 CYP3A4P08684 503 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 SPATA31C1P0DKV0 1188 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 DRD4P21917 467 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 TARSP26639 723 aaKnown RBP7.04□□□□□ -1.28
CSDE1-205ENST00000438362 SDC4P31431 198 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 EFNA5P52803 228 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 PRKCEQ02156 737 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 MTM1Q13496 603 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 BMT2Q1RMZ1 405 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 GRAMD1BQ3KR37 738 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 APOBEC3HQ6NTF7 200 aaKnown RBP7.04□□□□□ -1.28
CSDE1-205ENST00000438362 AADACL2Q6P093 401 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 PRELID2Q8N945 189 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 HIPK4Q8NE63 616 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 RDM1Q8NG50 284 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 ZKSCAN4Q969J2 545 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-205ENST00000438362 MKL1Q969V6 931 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 MED10Q9BTT4 135 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 C2orf40Q9H1Z8 148 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 FAM96AQ9H5X1 160 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 ACAD9Q9H845 621 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 HOXC10Q9NYD6 342 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 PCYOX1Q9UHG3 505 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 TLK1Q9UKI8 766 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 M0R2N6 131 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 SMAPO00193 183 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 CASQ2O14958 399 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-205ENST00000438362 MAFGO15525 162 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 GPC4O75487 556 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 ICAM1P05362 532 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 RBP3P10745 1247 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 KRT4P19013 534 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 GEMIN4P57678 1058 aaKnown RBP7.04□□□□□ -1.28
CSDE1-205ENST00000438362 AP2B1P63010 937 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 ZNF200P98182 395 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-205ENST00000438362 IFRD2Q12894 506 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-205ENST00000438362 CUL2Q13617 745 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 DBN1Q16643 649 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 CLEC16AQ2KHT3 1053 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 ASTE1Q2TB18 679 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-205ENST00000438362 NOP9Q86U38 636 aaKnown RBP7.04□□□□□ -1.28
CSDE1-205ENST00000438362 SESTD1Q86VW0 696 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 ST13P4Q8IZP2 240 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-205ENST00000438362 RASGEF1CQ8N431 466 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 EXD1Q8NHP7 514 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 ETNPPLQ8TBG4 499 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 DTX3LQ8TDB6 740 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 PRMT6Q96LA8 375 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-205ENST00000438362 TAAR1Q96RJ0 339 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 TARS2Q9BW92 718 aaKnown RBP7.04□□□□□ -1.28
CSDE1-205ENST00000438362 SMYD3Q9H7B4 428 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 LRRC4BQ9NT99 713 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 NDE1Q9NXR1 346 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 XPO7Q9UIA9 1087 aaKnown RBP7.04□□□□□ -1.28
CSDE1-205ENST00000438362 MID2Q9UJV3 735 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 CHMP2BQ9UQN3 213 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 ATXN2Q99700 1313 aaKnown RBP7.04□□□□□ -1.28
CSDE1-205ENST00000438362 TGFB1I1O43294 461 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 KRT10P13645 584 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 GARTP22102 1010 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 CHRNA5P30532 468 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 FLT3P36888 993 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 EPHB1P54762 984 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 TPD52P55327 224 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-205ENST00000438362 PPP3CAQ08209 521 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 EMC2Q15006 297 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 SGSM1Q2NKQ1 1148 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 WDR72Q3MJ13 1102 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 SH2D4BQ5SQS7 431 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 C1orf228Q6PIY5 440 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 PPIL6Q8IXY8 311 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 EPS8L1Q8TE68 723 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 DNAJC9Q8WXX5 260 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 CCT6BQ92526 530 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 KAT5Q92993 513 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 DCLK3Q9C098 648 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 SMYD2Q9NRG4 433 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 RAB6BQ9NRW1 208 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 TOPORSQ9NS56 1045 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-205ENST00000438362 HAO1Q9UJM8 370 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 SSX2IPQ9Y2D8 614 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 AFF2P51816 1311 aa7.04□□□□□ -1.28
CSDE1-205ENST00000438362 DISP2A7MBM2 1401 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms