RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 HTRA3P83110 453 aa27.41■■□□□ 1.98
CPNE1-216ENST00000437340 SCARA3Q6AZY7 606 aa27.41■■□□□ 1.98
CPNE1-216ENST00000437340 CDR2LQ86X02 465 aaPredicted RBP27.41■■□□□ 1.98
CPNE1-216ENST00000437340 REM2Q8IYK8 340 aaPredicted RBP27.41■■□□□ 1.98
CPNE1-216ENST00000437340 DDX47Q9H0S4 455 aaKnown RBP27.41■■□□□ 1.98
CPNE1-216ENST00000437340 RRM1P23921 792 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 SLC1A1P43005 524 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 CARSP49589 748 aaKnown RBP27.4■■□□□ 1.98
CPNE1-216ENST00000437340 C1QBPQ07021 282 aaKnown RBP27.4■■□□□ 1.98
CPNE1-216ENST00000437340 CUL1Q13616 776 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 NLRP7Q8WX94 980 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 ZNF606Q8WXB4 792 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 CASKIN2Q8WXE0 1202 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 CISHQ9NSE2 258 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 ANAPC7Q9UJX3 599 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 GJD2Q9UKL4 321 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 A6NJR5 290 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 ARF4P18085 180 aaPredicted RBP27.4■■□□□ 1.98
CPNE1-216ENST00000437340 CDC42EP1Q00587 391 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 SEL1L2Q5TEA6 688 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 KIAA0319LQ8IZA0 1049 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 FAM71BQ8TC56 605 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 WHAMMQ8TF30 809 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 BTBD6Q96KE9 485 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 ARHGAP39Q9C0H5 1083 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 MRPL47Q9HD33 250 aaKnown RBP27.4■■□□□ 1.98
CPNE1-216ENST00000437340 FLRT1Q9NZU1 646 aa27.4■■□□□ 1.98
CPNE1-216ENST00000437340 LSM8O95777 96 aaKnown RBP27.39■■□□□ 1.98
CPNE1-216ENST00000437340 ZNF211Q13398 564 aaPredicted RBP27.39■■□□□ 1.98
CPNE1-216ENST00000437340 TERF2Q15554 542 aa27.39■■□□□ 1.98
CPNE1-216ENST00000437340 TMEM192Q8IY95 271 aa27.39■■□□□ 1.98
CPNE1-216ENST00000437340 GDAP1L1Q96MZ0 367 aa27.39■■□□□ 1.98
CPNE1-216ENST00000437340 ADAM22Q9P0K1 906 aa27.39■■□□□ 1.98
CPNE1-216ENST00000437340 NFU1Q9UMS0 254 aa27.39■■□□□ 1.98
CPNE1-216ENST00000437340 MROH7Q68CQ1 1323 aa27.39■■□□□ 1.97
CPNE1-216ENST00000437340 THSD7BQ9C0I4 1608 aa27.39■■□□□ 1.97
CPNE1-216ENST00000437340 ZSCAN5CA6NGD5 496 aaPredicted RBP27.38■■□□□ 1.97
CPNE1-216ENST00000437340 ASPAP45381 313 aa27.38■■□□□ 1.97
CPNE1-216ENST00000437340 MARCKSL1P49006 195 aa27.38■■□□□ 1.97
CPNE1-216ENST00000437340 VEGFBP49765 207 aa27.38■■□□□ 1.97
CPNE1-216ENST00000437340 RWDD2BP57060 319 aa27.38■■□□□ 1.97
CPNE1-216ENST00000437340 SOCS4Q8WXH5 440 aa27.38■■□□□ 1.97
CPNE1-216ENST00000437340 IFT81Q8WYA0 676 aa27.38■■□□□ 1.97
CPNE1-216ENST00000437340 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.38■■□□□ 1.972e-10■□□□□ 11.3
CPNE1-216ENST00000437340 GNEQ9Y223 722 aaKnown RBP27.38■■□□□ 1.97
CPNE1-216ENST00000437340 SCINQ9Y6U3 715 aa27.38■■□□□ 1.97
CPNE1-216ENST00000437340 ANK1P16157 1881 aa27.38■■□□□ 1.97
CPNE1-216ENST00000437340 LACTBL1A8MY62 500 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 MYO1FO00160 1098 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 ADCY6O43306 1168 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 CYP2B6P20813 491 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 SCLT1Q96NL6 688 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 PLVAPQ9BX97 442 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 ZNF518BQ9C0D4 1074 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 AMACRQ9UHK6 382 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 A0A1B0GUA9 196 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 ESYT3A0FGR9 886 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 POLR3GO15318 223 aaPredicted RBP27.37■■□□□ 1.97
CPNE1-216ENST00000437340 TSPAN1O60635 241 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 ERLIN2O94905 339 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 CFHP08603 1231 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 RGS2P41220 211 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 CCL14Q16627 93 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 PLEKHA7Q6IQ23 1121 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 SEC14L1Q92503 715 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 CPB2Q96IY4 423 aa27.37■■□□□ 1.97
CPNE1-216ENST00000437340 DYNC1LI2O43237 492 aaPredicted RBP27.36■■□□□ 1.97
CPNE1-216ENST00000437340 CSDE1O75534 798 aaKnown RBP27.36■■□□□ 1.97
CPNE1-216ENST00000437340 F2P00734 622 aa27.36■■□□□ 1.97
CPNE1-216ENST00000437340 ATICP31939 592 aa27.36■■□□□ 1.97
CPNE1-216ENST00000437340 LACTBP83111 547 aaPredicted RBP27.36■■□□□ 1.97
CPNE1-216ENST00000437340 PTP4A2Q12974 167 aa27.36■■□□□ 1.97
CPNE1-216ENST00000437340 NT5DC4Q86YG4 428 aa27.36■■□□□ 1.97
CPNE1-216ENST00000437340 PASD1Q8IV76 773 aa27.36■■□□□ 1.97
CPNE1-216ENST00000437340 MREGQ8N565 214 aa27.36■■□□□ 1.97
CPNE1-216ENST00000437340 C1orf127Q8N9H9 656 aa27.36■■□□□ 1.97
CPNE1-216ENST00000437340 PPP1R16BQ96T49 567 aa27.36■■□□□ 1.97
CPNE1-216ENST00000437340 APBA2Q99767 749 aa27.36■■□□□ 1.97
CPNE1-216ENST00000437340 C11orf70Q9BRQ4 267 aa27.36■■□□□ 1.97
CPNE1-216ENST00000437340 ADPGKQ9BRR6 497 aa27.36■■□□□ 1.97
CPNE1-216ENST00000437340 VRTNQ9H8Y1 702 aa27.36■■□□□ 1.97
CPNE1-216ENST00000437340 SIX4Q9UIU6 781 aa27.36■■□□□ 1.97
CPNE1-216ENST00000437340 PCDHGC3Q9UN70 934 aa27.36■■□□□ 1.97
CPNE1-216ENST00000437340 NRCAMQ92823 1304 aa27.36■■□□□ 1.97
CPNE1-216ENST00000437340 NFICP08651 508 aa27.35■■□□□ 1.97
CPNE1-216ENST00000437340 CD58P19256 250 aa27.35■■□□□ 1.97
CPNE1-216ENST00000437340 PSMC4P43686 418 aa27.35■■□□□ 1.97
CPNE1-216ENST00000437340 FCGRTP55899 365 aa27.35■■□□□ 1.97
CPNE1-216ENST00000437340 ZNF667Q5HYK9 610 aa27.35■■□□□ 1.97
CPNE1-216ENST00000437340 BCO2Q9BYV7 579 aa27.35■■□□□ 1.97
CPNE1-216ENST00000437340 NR2E1Q9Y466 385 aa27.35■■□□□ 1.97
CPNE1-216ENST00000437340 PYGMP11217 842 aa27.35■■□□□ 1.97
CPNE1-216ENST00000437340 MMP8P22894 467 aa27.35■■□□□ 1.97
CPNE1-216ENST00000437340 DHX34Q14147 1143 aaKnown RBP27.35■■□□□ 1.97
CPNE1-216ENST00000437340 PCBP1Q15365 356 aaKnown RBP eCLIP27.35■■□□□ 1.973e-7■■■■■ 33.1
CPNE1-216ENST00000437340 SLC10A6Q3KNW5 377 aa27.35■■□□□ 1.97
CPNE1-216ENST00000437340 ALS2CLQ60I27 953 aa27.35■■□□□ 1.97
CPNE1-216ENST00000437340 JADE1Q6IE81 842 aa27.35■■□□□ 1.97
CPNE1-216ENST00000437340 PLEKHA4Q9H4M7 779 aa27.35■■□□□ 1.97
CPNE1-216ENST00000437340 SETD4Q9NVD3 440 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms