RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 GDAP2Q9NXN4 497 aa14.4□□□□□ -0.1
RPE-208ENST00000436630 DNAJC12Q9UKB3 198 aa14.4□□□□□ -0.1
RPE-208ENST00000436630 TBKBP1A7MCY6 615 aa14.39□□□□□ -0.11
RPE-208ENST00000436630 ZBBXA8MT70 800 aa14.39□□□□□ -0.11
RPE-208ENST00000436630 FAM163BP0C2L3 166 aa14.39□□□□□ -0.11
RPE-208ENST00000436630 HNRNPH3P31942 346 aaKnown RBP14.39□□□□□ -0.11
RPE-208ENST00000436630 STAT1P42224 750 aa14.39□□□□□ -0.11
RPE-208ENST00000436630 AFF1P51825 1210 aaKnown RBP14.39□□□□□ -0.11
RPE-208ENST00000436630 LRMPQ12912 555 aa14.39□□□□□ -0.11
RPE-208ENST00000436630 WDR72Q3MJ13 1102 aa14.39□□□□□ -0.11
RPE-208ENST00000436630 RRAGAQ7L523 313 aa14.39□□□□□ -0.11
RPE-208ENST00000436630 OTOP2Q7RTS6 562 aa14.39□□□□□ -0.11
RPE-208ENST00000436630 CCDC186Q7Z3E2 898 aa14.39□□□□□ -0.11
RPE-208ENST00000436630 ARHGEF19Q8IW93 802 aa14.39□□□□□ -0.11
RPE-208ENST00000436630 COLGALT2Q8IYK4 626 aa14.39□□□□□ -0.11
RPE-208ENST00000436630 TC2NQ8N9U0 490 aa14.39□□□□□ -0.11
RPE-208ENST00000436630 SHC3Q92529 594 aa14.39□□□□□ -0.11
RPE-208ENST00000436630 BCO2Q9BYV7 579 aa14.39□□□□□ -0.11
RPE-208ENST00000436630 RC3H2Q9HBD1 1191 aaKnown RBP14.39□□□□□ -0.11
RPE-208ENST00000436630 APOBEC3GQ9HC16 384 aaKnown RBP14.39□□□□□ -0.11
RPE-208ENST00000436630 NLRC4Q9NPP4 1024 aa14.39□□□□□ -0.11
RPE-208ENST00000436630 ABHD10Q9NUJ1 306 aa14.39□□□□□ -0.11
RPE-208ENST00000436630 NUB1Q9Y5A7 615 aa14.39□□□□□ -0.11
RPE-208ENST00000436630 TSC2P49815 1807 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 CASTOR2A6NHX0 329 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 KPNA7A9QM74 516 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 FERP16591 822 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 SOX5P35711 763 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 ASPAP45381 313 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 AARSP49588 968 aaKnown RBP eCLIP14.38□□□□□ -0.11
RPE-208ENST00000436630 CLCNKBP51801 687 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 LILRA4P59901 499 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 DEFB103AP81534 67 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 CDK17Q00537 523 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 DRAP1Q14919 205 aaPredicted RBP14.38□□□□□ -0.11
RPE-208ENST00000436630 SFMBT2Q5VUG0 894 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 SPOPLQ6IQ16 392 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 DCLRE1AQ6PJP8 1040 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 C16orf59Q7L2K0 433 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 DPH6Q7L8W6 267 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 TOP6BLQ8N6T0 577 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 CPLX3Q8WVH0 158 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 ZNF689Q96CS4 500 aaPredicted RBP14.38□□□□□ -0.11
RPE-208ENST00000436630 KREMEN1Q96MU8 473 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.38□□□□□ -0.11
RPE-208ENST00000436630 GOLGA2P5Q9HBQ8 144 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 AIPL1Q9NZN9 384 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 NXF1Q9UBU9 619 aaKnown RBP14.38□□□□□ -0.11
RPE-208ENST00000436630 BZW2Q9Y6E2 419 aaKnown RBP14.38□□□□□ -0.11
RPE-208ENST00000436630 SLC4A7Q9Y6M7 1214 aa14.38□□□□□ -0.11
RPE-208ENST00000436630 PDE4DIPQ5VU43 2346 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 KIAA1671Q9BY89 1806 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 LRRC53A6NM62 1247 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 TRAPPC3O43617 180 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 UPP2O95045 317 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 GJB5O95377 273 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 FECHP22830 423 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 ANXA13P27216 316 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 BPIFB4P59827 614 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 APBA1Q02410 837 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 INCA1Q0VD86 236 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 ELAVL2Q12926 359 aaKnown RBP14.37□□□□□ -0.11
RPE-208ENST00000436630 ASIC2Q16515 512 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 MEA1Q16626 185 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 ARHGAP44Q17R89 818 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 GJB7Q6PEY0 223 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 TMEM86AQ8N2M4 240 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 TATDN2Q93075 761 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 YME1L1Q96TA2 773 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 COLEC11Q9BWP8 271 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 DSEQ9UL01 958 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 CNTN6Q9UQ52 1028 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 SNX9Q9Y5X1 595 aa14.37□□□□□ -0.11
RPE-208ENST00000436630 PPEF2O14830 753 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 HUS1O60921 280 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 LRRN2O75325 713 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 TACC1O75410 805 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 B3GAT3O94766 335 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 ODC1P11926 461 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 LAG3P18627 525 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 PRKCIP41743 596 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 EPHB4P54760 987 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 ADKP55263 362 aaKnown RBP14.36□□□□□ -0.11
RPE-208ENST00000436630 HTRA4P83105 476 aaPredicted RBP14.36□□□□□ -0.11
RPE-208ENST00000436630 BTG3Q14201 252 aaPredicted RBP14.36□□□□□ -0.11
RPE-208ENST00000436630 HS1BP3Q53T59 392 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 RASIP1Q5U651 963 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 SCARA5Q6ZMJ2 495 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 FAM71AQ8IYT1 594 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 UBR7Q8N806 425 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 APPL2Q8NEU8 664 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 MMS19Q96T76 1030 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 GPR88Q9GZN0 384 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 NRDE2Q9H7Z3 1164 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.36□□□□□ -0.114e-6■■■■■ 111.8
RPE-208ENST00000436630 STK39Q9UEW8 545 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 AJAP1Q9UKB5 411 aaPredicted RBP14.36□□□□□ -0.11
RPE-208ENST00000436630 INSL6Q9Y581 213 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 CEP290O15078 2479 aa14.36□□□□□ -0.11
RPE-208ENST00000436630 DDHD2O94830 711 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms