RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 PAK2Q13177 524 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 TBX2Q13207 712 aaPredicted RBP7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 HSP90AA2PQ14568 343 aaPredicted RBP7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 KYAT1Q16773 422 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 FKBP15Q5T1M5 1219 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 SPECC1LQ69YQ0 1117 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 SCARA3Q6AZY7 606 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 C15orf39Q6ZRI6 1047 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 TMC6Q7Z403 805 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 RTN4RL1Q86UN2 441 aaPredicted RBP7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 SPC24Q8NBT2 197 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 LMO3Q8TAP4 145 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 CCDC51Q96ER9 411 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 CGRRF1Q99675 332 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 ADPGKQ9BRR6 497 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 TMEM117Q9H0C3 514 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 WNT8AQ9H1J5 351 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 CXCL16Q9H2A7 254 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 HIPK3Q9H422 1215 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 NXF3Q9H4D5 531 aaKnown RBP7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 SNTG2Q9NY99 539 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 HES2Q9Y543 173 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 IPPQ9Y573 584 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 PCDHB2Q9Y5E7 798 aa7.61□□□□□ -1.19
LSM3P3-201ENST00000436601 WDR81Q562E7 1941 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 ITIH6Q6UXX5 1313 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 TTC26A0AVF1 554 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 GTPBP10A4D1E9 387 aaKnown RBP7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 TRIM43BA6NCK2 446 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 EPHB6O15197 1021 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 PMM2O15305 246 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 STX10O60499 249 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 LRRN2O75325 713 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 C4BPAP04003 597 aaKnown RBP7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 CLTBP09497 229 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 PCSK2P16519 638 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 SLC9A1P19634 815 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 AKAP5P24588 427 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 ITGB8P26012 769 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 PON1P27169 355 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 GTF2H1P32780 548 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 CYP2C18P33260 490 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 CCL23P55773 120 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 MYL7Q01449 175 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 TCTN1Q2MV58 587 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 EPC2Q52LR7 807 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 PLEKHG4Q58EX7 1191 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 XKR4Q5GH76 650 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 LMBRD2Q68DH5 695 aaPredicted RBP7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 ALG1LQ6GMV1 187 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 TWF2Q6IBS0 349 aaKnown RBP7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 ALKAL1Q6UXT8 129 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 SV2AQ7L0J3 742 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 APBB1IPQ7Z5R6 666 aaPredicted RBP7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 MRPL10Q7Z7H8 261 aaKnown RBP7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 DRC7Q8IY82 874 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 EFCAB13Q8IY85 973 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 OR5B17Q8NGF7 314 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 SEMA4DQ92854 862 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 TRIM43Q96BQ3 446 aaPredicted RBP7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 VWCEQ96DN2 955 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 IFT43Q96FT9 208 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 SCLYQ96I15 445 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 ACAP3Q96P50 834 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 FNBP1Q96RU3 617 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 ADAM2Q99965 735 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 CRACR2AQ9BSW2 395 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 CCDC94Q9BW85 323 aaPredicted RBP7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 IFIH1Q9BYX4 1025 aaKnown RBP7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 MMRN2Q9H8L6 949 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 RPF1Q9H9Y2 349 aaKnown RBP7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 PLEKHA5Q9HAU0 1116 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 TMEM8AQ9HCN3 771 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 SIX2Q9NPC8 291 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 RGS18Q9NS28 235 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 FAM105AQ9NUU6 356 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 TMEM39AQ9NV64 488 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 IMPACTQ9P2X3 320 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 PARP2Q9UGN5 583 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 POLIQ9UNA4 740 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 COQ4Q9Y3A0 265 aa7.6□□□□□ -1.19
LSM3P3-201ENST00000436601 SIP14410 1827 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 FRMPD3Q5JV73 1810 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 MYH9P35579 1960 aaKnown RBP7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 A0A0U1RQF3 1178 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 MEIS3P2A8K0S8 358 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 KIAA0355O15063 1070 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 P4HA2O15460 535 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 N4BP1O75113 896 aaKnown RBP7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 ZNF623O75123 536 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 RECQL4O94761 1208 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 NOL4O94818 638 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 IL18RAPO95256 599 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 VNN1O95497 513 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 CXCL10P02778 98 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 GYPCP04921 128 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 NFICP08651 508 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 ACTN1P12814 892 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 ZSCAN20P17040 1043 aaPredicted RBP7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 ATF7P17544 494 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms