RNA–Protein interactions for RNA: ENST00000436040.6

APTX-208, Transcript of aprataxin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene APTX, Length 2,168 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-208ENST00000436040 H3BNC9 293 aa12.53□□□□□ -0.4
APTX-208ENST00000436040 EBAG9O00559 213 aa12.53□□□□□ -0.4
APTX-208ENST00000436040 CLIC2O15247 247 aa12.53□□□□□ -0.4
APTX-208ENST00000436040 TGFB1I1O43294 461 aa12.53□□□□□ -0.4
APTX-208ENST00000436040 GYPCP04921 128 aa12.53□□□□□ -0.4
APTX-208ENST00000436040 MATR3P43243 847 aaKnown RBP eCLIP12.53□□□□□ -0.48e-7■■■■□ 24.4
APTX-208ENST00000436040 AFF1P51825 1210 aaKnown RBP12.53□□□□□ -0.4
APTX-208ENST00000436040 OSTNP61366 133 aa12.53□□□□□ -0.4
APTX-208ENST00000436040 KYAT1Q16773 422 aa12.53□□□□□ -0.4
APTX-208ENST00000436040 KLHL10Q6JEL2 608 aa12.53□□□□□ -0.4
APTX-208ENST00000436040 FOXR1Q6PIV2 292 aa12.53□□□□□ -0.4
APTX-208ENST00000436040 TRAPPC11Q7Z392 1133 aa12.53□□□□□ -0.4
APTX-208ENST00000436040 GSTCDQ8NEC7 633 aa12.53□□□□□ -0.4
APTX-208ENST00000436040 ZNF507Q8TCN5 953 aa12.53□□□□□ -0.4
APTX-208ENST00000436040 CCDC47Q96A33 483 aaKnown RBP12.53□□□□□ -0.4
APTX-208ENST00000436040 RPS6KC1Q96S38 1066 aa12.53□□□□□ -0.4
APTX-208ENST00000436040 PCDHB12Q9Y5F1 795 aa12.53□□□□□ -0.4
APTX-208ENST00000436040 ATG2AQ2TAZ0 1938 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 POMCP01189 267 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 SCNN1GP51170 649 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 YARSP54577 528 aaKnown RBP12.52□□□□□ -0.4
APTX-208ENST00000436040 RNASELQ05823 741 aaKnown RBP12.52□□□□□ -0.4
APTX-208ENST00000436040 GRIK3Q13003 919 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 ZNF658Q5TYW1 1059 aaPredicted RBP12.52□□□□□ -0.4
APTX-208ENST00000436040 ZNF662Q6ZS27 426 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 THNSL1Q8IYQ7 743 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 TMEM130Q8N3G9 435 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 FAM76AQ8TAV0 307 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 GDPD5Q8WTR4 605 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 ZNF558Q96NG5 402 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 MED15Q96RN5 788 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 GAS2L1Q99501 681 aaPredicted RBP12.52□□□□□ -0.4
APTX-208ENST00000436040 CBWD1Q9BRT8 395 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 PCIF1Q9H4Z3 704 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 NRDE2Q9H7Z3 1164 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 TOPORSQ9NS56 1045 aaPredicted RBP12.52□□□□□ -0.4
APTX-208ENST00000436040 MIOSQ9NXC5 875 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 KLK14Q9P0G3 267 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 LIMA1Q9UHB6 759 aaKnown RBP12.52□□□□□ -0.4
APTX-208ENST00000436040 HPCAL4Q9UM19 191 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 SAR1BQ9Y6B6 198 aa12.52□□□□□ -0.4
APTX-208ENST00000436040 ANK1P16157 1881 aa12.52□□□□□ -0.41
APTX-208ENST00000436040 PPP1R3GB7ZBB8 358 aa12.52□□□□□ -0.41
APTX-208ENST00000436040 OGTO15294 1046 aa12.52□□□□□ -0.41
APTX-208ENST00000436040 FAM189A1O60320 539 aa12.52□□□□□ -0.41
APTX-208ENST00000436040 LPXNO60711 386 aa12.52□□□□□ -0.41
APTX-208ENST00000436040 PPM1AP35813 382 aa12.52□□□□□ -0.41
APTX-208ENST00000436040 DSC1Q08554 894 aa12.52□□□□□ -0.41
APTX-208ENST00000436040 BMT2Q1RMZ1 405 aa12.52□□□□□ -0.41
APTX-208ENST00000436040 TSR1Q2NL82 804 aaKnown RBP12.52□□□□□ -0.41
APTX-208ENST00000436040 KCNT2Q6UVM3 1135 aa12.52□□□□□ -0.41
APTX-208ENST00000436040 SYCP3Q8IZU3 236 aa12.52□□□□□ -0.41
APTX-208ENST00000436040 MYLIPQ8WY64 445 aa12.52□□□□□ -0.41
APTX-208ENST00000436040 ACAP3Q96P50 834 aa12.52□□□□□ -0.41
APTX-208ENST00000436040 FAM193BQ96PV7 902 aaPredicted RBP12.52□□□□□ -0.41
APTX-208ENST00000436040 TMEM175Q9BSA9 504 aa12.52□□□□□ -0.41
APTX-208ENST00000436040 MSTO1Q9BUK6 570 aa12.52□□□□□ -0.41
APTX-208ENST00000436040 RFXAPO00287 272 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 PTGESO14684 152 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 ZC3H11AO75152 810 aaKnown RBP eCLIP12.51□□□□□ -0.41
APTX-208ENST00000436040 DDHD2O94830 711 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 CLTAP09496 248 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 POU3F3P20264 500 aaPredicted RBP12.51□□□□□ -0.41
APTX-208ENST00000436040 TNFSF9P41273 254 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 ARHGAP25P42331 645 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 BCAR1P56945 870 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 STX17P56962 302 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 GPM6BQ13491 265 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 XKR4Q5GH76 650 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 ALKAL1Q6UXT8 129 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 ZNF280BQ86YH2 543 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 KLHL23Q8NBE8 558 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 NOA1Q8NC60 698 aaKnown RBP12.51□□□□□ -0.41
APTX-208ENST00000436040 ACRBPQ8NEB7 543 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 FAM84AQ96KN4 292 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 SNX27Q96L92 541 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 KCTD10Q9H3F6 313 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 LMCD1Q9NZU5 365 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 REV3LO60673 3130 aa12.51□□□□□ -0.41
APTX-208ENST00000436040 GOLGA8IPA6NC78 632 aa12.5□□□□□ -0.41
APTX-208ENST00000436040 GOLGA8JA6NMD2 632 aa12.5□□□□□ -0.41
APTX-208ENST00000436040 TULP1O00294 542 aaPredicted RBP12.5□□□□□ -0.41
APTX-208ENST00000436040 MEFVO15553 781 aaPredicted RBP12.5□□□□□ -0.41
APTX-208ENST00000436040 B4GALT3O60512 393 aa12.5□□□□□ -0.41
APTX-208ENST00000436040 GARTP22102 1010 aa12.5□□□□□ -0.41
APTX-208ENST00000436040 ALDH7A1P49419 539 aaKnown RBP12.5□□□□□ -0.41
APTX-208ENST00000436040 KRT83P78385 493 aa12.5□□□□□ -0.41
APTX-208ENST00000436040 ADGRE1Q14246 886 aa12.5□□□□□ -0.41
APTX-208ENST00000436040 SPATS2Q86XZ4 545 aaKnown RBP12.5□□□□□ -0.41
APTX-208ENST00000436040 COLGALT2Q8IYK4 626 aa12.5□□□□□ -0.41
APTX-208ENST00000436040 SLC39A11Q8N1S5 342 aa12.5□□□□□ -0.41
APTX-208ENST00000436040 MICALL1Q8N3F8 863 aa12.5□□□□□ -0.41
APTX-208ENST00000436040 NOC3LQ8WTT2 800 aaKnown RBP12.5□□□□□ -0.41
APTX-208ENST00000436040 POMGNT1Q8WZA1 660 aa12.5□□□□□ -0.41
APTX-208ENST00000436040 SAAL1Q96ER3 474 aa12.5□□□□□ -0.41
APTX-208ENST00000436040 LMAN2LQ9H0V9 348 aa12.5□□□□□ -0.41
APTX-208ENST00000436040 SPG21Q9NZD8 308 aa12.5□□□□□ -0.41
APTX-208ENST00000436040 DNAJB4Q9UDY4 337 aa12.5□□□□□ -0.41
APTX-208ENST00000436040 AGO2Q9UKV8 859 aaKnown RBP12.5□□□□□ -0.41
APTX-208ENST00000436040 PLAGL2Q9UPG8 496 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms