RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 FAM217BQ9NTX9 383 aaPredicted RBP23.54■■□□□ 1.36
TOP2B-204ENST00000435706 TMEM247A6NEH6 219 aa23.54■■□□□ 1.36
TOP2B-204ENST00000435706 CALB2P22676 271 aa23.54■■□□□ 1.36
TOP2B-204ENST00000435706 DUOXA2Q1HG44 320 aa23.54■■□□□ 1.36
TOP2B-204ENST00000435706 TTC33Q6PID6 262 aaPredicted RBP23.54■■□□□ 1.36
TOP2B-204ENST00000435706 NLGN1Q8N2Q7 840 aa23.54■■□□□ 1.36
TOP2B-204ENST00000435706 PCYOX1LQ8NBM8 494 aa23.54■■□□□ 1.36
TOP2B-204ENST00000435706 ZNF335Q9H4Z2 1342 aaPredicted RBP23.54■■□□□ 1.36
TOP2B-204ENST00000435706 QRICH2Q9H0J4 1663 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 ADRM1Q16186 407 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 RBBP7Q16576 425 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 TRIM16LQ309B1 348 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 IZUMO2Q6UXV1 221 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 TTC39CQ8N584 583 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 MAP3K10Q02779 954 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 MRPL4Q9BYD3 311 aaKnown RBP23.53■■□□□ 1.36
TOP2B-204ENST00000435706 CDC42EP4Q9H3Q1 356 aaKnown RBP23.53■■□□□ 1.36
TOP2B-204ENST00000435706 TASP1Q9H6P5 420 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 PAK5Q9P286 719 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 AKR1B1P15121 316 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 HLA-DPA1P20036 260 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 TTI2Q6NXR4 508 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 MTDHQ86UE4 582 aaKnown RBP23.53■■□□□ 1.36
TOP2B-204ENST00000435706 FAM84BQ96KN1 310 aaPredicted RBP23.53■■□□□ 1.36
TOP2B-204ENST00000435706 CD209Q9NNX6 404 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 TRIM49D1C9J1S8 452 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 FXR2P51116 673 aaKnown RBP eCLIP23.53■■□□□ 1.367e-7■■■□□ 15.9
TOP2B-204ENST00000435706 KCNQ4P56696 695 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 SKOR1P84550 965 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 SNRNP35Q16560 246 aaKnown RBP23.53■■□□□ 1.36
TOP2B-204ENST00000435706 Q3C1V9 767 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 WLSQ5T9L3 541 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 NMD3Q96D46 503 aaKnown RBP23.53■■□□□ 1.36
TOP2B-204ENST00000435706 KCND1Q9NSA2 647 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 WHRNQ9P202 907 aa23.53■■□□□ 1.36
TOP2B-204ENST00000435706 KRT16P08779 473 aa23.52■■□□□ 1.36
TOP2B-204ENST00000435706 ZC2HC1CQ53FD0 456 aaPredicted RBP23.52■■□□□ 1.36
TOP2B-204ENST00000435706 PRUNE1Q86TP1 453 aa23.52■■□□□ 1.36
TOP2B-204ENST00000435706 SHCBP1LQ9BZQ2 653 aa23.52■■□□□ 1.36
TOP2B-204ENST00000435706 RAVER2Q9HCJ3 691 aaKnown RBP23.52■■□□□ 1.36
TOP2B-204ENST00000435706 ZNF302Q9NR11 478 aa23.52■■□□□ 1.36
TOP2B-204ENST00000435706 ARHGEF37A1IGU5 675 aa23.52■■□□□ 1.36
TOP2B-204ENST00000435706 STRNO43815 780 aa23.52■■□□□ 1.36
TOP2B-204ENST00000435706 CRKP46108 304 aa23.52■■□□□ 1.36
TOP2B-204ENST00000435706 NME3Q13232 169 aa23.52■■□□□ 1.36
TOP2B-204ENST00000435706 ZNF512BQ96KM6 892 aaPredicted RBP23.52■■□□□ 1.36
TOP2B-204ENST00000435706 RUBCNLQ9H714 662 aa23.52■■□□□ 1.36
TOP2B-204ENST00000435706 MRGBPQ9NV56 204 aa23.52■■□□□ 1.36
TOP2B-204ENST00000435706 ARHGAP20Q9P2F6 1191 aa23.52■■□□□ 1.36
TOP2B-204ENST00000435706 WDR35Q9P2L0 1181 aa23.52■■□□□ 1.36
TOP2B-204ENST00000435706 EIF3DO15371 548 aaKnown RBP eCLIP23.52■■□□□ 1.36
TOP2B-204ENST00000435706 IFNEQ86WN2 208 aa23.52■■□□□ 1.36
TOP2B-204ENST00000435706 RBBP8NLQ8NC74 664 aaPredicted RBP23.52■■□□□ 1.36
TOP2B-204ENST00000435706 ZKSCAN4Q969J2 545 aaPredicted RBP23.52■■□□□ 1.36
TOP2B-204ENST00000435706 NSUN4Q96CB9 384 aaKnown RBP23.52■■□□□ 1.36
TOP2B-204ENST00000435706 YWHABP31946 246 aaKnown RBP23.52■■□□□ 1.36
TOP2B-204ENST00000435706 FAM196AQ6ZSG2 479 aa23.52■■□□□ 1.36
TOP2B-204ENST00000435706 SARS2Q9NP81 518 aaKnown RBP23.52■■□□□ 1.36
TOP2B-204ENST00000435706 CROCC2H7BZ55 1655 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 NPEPPSP55786 919 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 TBX2Q13207 712 aaPredicted RBP23.51■■□□□ 1.35
TOP2B-204ENST00000435706 ZC3H12BQ5HYM0 836 aaKnown RBP23.51■■□□□ 1.35
TOP2B-204ENST00000435706 GPR141Q7Z602 305 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 AIPL1Q9NZN9 384 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 LBRQ14739 615 aaKnown RBP23.51■■□□□ 1.35
TOP2B-204ENST00000435706 NKX1-1Q15270 411 aaPredicted RBP23.51■■□□□ 1.35
TOP2B-204ENST00000435706 CATSPER4Q7RTX7 472 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 HERC5Q9UII4 1024 aaKnown RBP23.51■■□□□ 1.35
TOP2B-204ENST00000435706 GTF3C4Q9UKN8 822 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 TBX3O15119 743 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 ZNF189O75820 626 aaPredicted RBP23.51■■□□□ 1.35
TOP2B-204ENST00000435706 IFNA8P32881 189 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 PHKA2P46019 1235 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 NUDT2P50583 147 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 FUKQ8N0W3 1084 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 PCDHB2Q9Y5E7 798 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 NBPF26B4DH59 902 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 HUS1O60921 280 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 RPS6P62753 249 aaKnown RBP23.51■■□□□ 1.35
TOP2B-204ENST00000435706 USP10Q14694 798 aaKnown RBP23.51■■□□□ 1.35
TOP2B-204ENST00000435706 WASHC2DQ5SRD0 308 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 DPP9Q86TI2 863 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 NBPF15Q8N660 670 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 HDAC7Q8WUI4 952 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.51■■□□□ 1.35
TOP2B-204ENST00000435706 ASNSP08243 561 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 TOB1P50616 345 aaPredicted RBP23.51■■□□□ 1.35
TOP2B-204ENST00000435706 MRPL28Q13084 256 aaKnown RBP23.51■■□□□ 1.35
TOP2B-204ENST00000435706 FLAD1Q8NFF5 587 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 SPATA18Q8TC71 538 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 TIPINQ9BVW5 301 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 PLA2G12BQ9BX93 195 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 C2orf40Q9H1Z8 148 aa23.51■■□□□ 1.35
TOP2B-204ENST00000435706 CST8O60676 142 aa23.5■■□□□ 1.35
TOP2B-204ENST00000435706 WDR47O94967 919 aa23.5■■□□□ 1.35
TOP2B-204ENST00000435706 SPRP35270 261 aaPredicted RBP23.5■■□□□ 1.35
TOP2B-204ENST00000435706 E5RI56 91 aa23.5■■□□□ 1.35
TOP2B-204ENST00000435706 ADORA2BP29275 332 aa23.5■■□□□ 1.35
TOP2B-204ENST00000435706 DEFA1P59665 94 aa23.5■■□□□ 1.35
TOP2B-204ENST00000435706 DEFA3P59666 94 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms