RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 REXO1L1PQ8IX06 675 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 TTC39CQ8N584 583 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 DBF4BQ8NFT6 615 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 OLIG1Q8TAK6 271 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 EPS8L1Q8TE68 723 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 C18orf25Q96B23 403 aaPredicted RBP16.18■□□□□ 0.18
TMEM40-204ENST00000435218 ZFP42Q96MM3 310 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 ZNF560Q96MR9 790 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 DESI2Q9BSY9 194 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 CYP3A43Q9HB55 503 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.18■□□□□ 0.18
TMEM40-204ENST00000435218 NENFQ9UMX5 172 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 ATP11BQ9Y2G3 1177 aa16.18■□□□□ 0.18
TMEM40-204ENST00000435218 REXO2Q9Y3B8 237 aaKnown RBP16.18■□□□□ 0.18
TMEM40-204ENST00000435218 TSC2P49815 1807 aa16.17■□□□□ 0.18
TMEM40-204ENST00000435218 MYH10P35580 1976 aa16.17■□□□□ 0.18
TMEM40-204ENST00000435218 ZNF263O14978 683 aa16.17■□□□□ 0.18
TMEM40-204ENST00000435218 OFD1O75665 1012 aa16.17■□□□□ 0.18
TMEM40-204ENST00000435218 THP07101 528 aa16.17■□□□□ 0.18
TMEM40-204ENST00000435218 MLH1P40692 756 aa16.17■□□□□ 0.18
TMEM40-204ENST00000435218 GUCY2FP51841 1108 aa16.17■□□□□ 0.18
TMEM40-204ENST00000435218 SOX4Q06945 474 aaPredicted RBP16.17■□□□□ 0.18
TMEM40-204ENST00000435218 SPA17Q15506 151 aa16.17■□□□□ 0.18
TMEM40-204ENST00000435218 C10orf76Q5T2E6 689 aa16.17■□□□□ 0.18
TMEM40-204ENST00000435218 UBE2Q1Q7Z7E8 422 aa16.17■□□□□ 0.18
TMEM40-204ENST00000435218 C17orf53Q8N3J3 647 aaPredicted RBP16.17■□□□□ 0.18
TMEM40-204ENST00000435218 ACRBPQ8NEB7 543 aa16.17■□□□□ 0.18
TMEM40-204ENST00000435218 LPPQ93052 612 aa16.17■□□□□ 0.18
TMEM40-204ENST00000435218 ELMO3Q96BJ8 720 aa16.17■□□□□ 0.18
TMEM40-204ENST00000435218 PPP1R13BQ96KQ4 1090 aa16.17■□□□□ 0.18
TMEM40-204ENST00000435218 GAD1Q99259 594 aa16.17■□□□□ 0.18
TMEM40-204ENST00000435218 NOCTQ9UK39 431 aaKnown RBP16.17■□□□□ 0.18
TMEM40-204ENST00000435218 A0A087X0T9 212 aa16.16■□□□□ 0.18
TMEM40-204ENST00000435218 USP27XA6NNY8 438 aa16.16■□□□□ 0.18
TMEM40-204ENST00000435218 CYP26A1O43174 497 aa16.16■□□□□ 0.18
TMEM40-204ENST00000435218 FAM228BP0C875 321 aa16.16■□□□□ 0.18
TMEM40-204ENST00000435218 ZNF132P52740 706 aa16.16■□□□□ 0.18
TMEM40-204ENST00000435218 GRIK3Q13003 919 aa16.16■□□□□ 0.18
TMEM40-204ENST00000435218 ZNF677Q86XU0 584 aa16.16■□□□□ 0.18
TMEM40-204ENST00000435218 SLC30A5Q8TAD4 765 aa16.16■□□□□ 0.18
TMEM40-204ENST00000435218 RSPH1Q8WYR4 309 aa16.16■□□□□ 0.18
TMEM40-204ENST00000435218 CISHQ9NSE2 258 aa16.16■□□□□ 0.18
TMEM40-204ENST00000435218 TMEM39AQ9NV64 488 aa16.16■□□□□ 0.18
TMEM40-204ENST00000435218 TMEM161AQ9NX61 479 aa16.16■□□□□ 0.18
TMEM40-204ENST00000435218 ADAMTS1Q9UHI8 967 aa16.16■□□□□ 0.18
TMEM40-204ENST00000435218 ENPP3O14638 875 aa16.15■□□□□ 0.18
TMEM40-204ENST00000435218 KIAA0355O15063 1070 aa16.15■□□□□ 0.18
TMEM40-204ENST00000435218 CYP11B1P15538 503 aa16.15■□□□□ 0.18
TMEM40-204ENST00000435218 USP8P40818 1118 aa16.15■□□□□ 0.18
TMEM40-204ENST00000435218 PDE6CP51160 858 aa16.15■□□□□ 0.18
TMEM40-204ENST00000435218 INCA1Q0VD86 236 aa16.15■□□□□ 0.18
TMEM40-204ENST00000435218 TXLNBQ8N3L3 684 aa16.15■□□□□ 0.18
TMEM40-204ENST00000435218 SCLYQ96I15 445 aa16.15■□□□□ 0.18
TMEM40-204ENST00000435218 AGPAT1Q99943 283 aa16.15■□□□□ 0.18
TMEM40-204ENST00000435218 PPP1R12CQ9BZL4 782 aa16.15■□□□□ 0.18
TMEM40-204ENST00000435218 LUC7LQ9NQ29 371 aaKnown RBP16.15■□□□□ 0.18
TMEM40-204ENST00000435218 RNF216Q9NWF9 866 aaPredicted RBP16.15■□□□□ 0.18
TMEM40-204ENST00000435218 MIOSQ9NXC5 875 aa16.15■□□□□ 0.18
TMEM40-204ENST00000435218 TRMT1Q9NXH9 659 aaKnown RBP16.15■□□□□ 0.18
TMEM40-204ENST00000435218 GDAP2Q9NXN4 497 aa16.15■□□□□ 0.18
TMEM40-204ENST00000435218 NAGPAQ9UK23 515 aa16.15■□□□□ 0.18
TMEM40-204ENST00000435218 DDX3XO00571 662 aaKnown RBP eCLIP16.14■□□□□ 0.18
TMEM40-204ENST00000435218 PPEF2O14830 753 aa16.14■□□□□ 0.18
TMEM40-204ENST00000435218 KRT5P13647 590 aa16.14■□□□□ 0.18
TMEM40-204ENST00000435218 PAX3P23760 479 aa16.14■□□□□ 0.18
TMEM40-204ENST00000435218 RPL9P32969 192 aaKnown RBP16.14■□□□□ 0.18
TMEM40-204ENST00000435218 CYP2C18P33260 490 aa16.14■□□□□ 0.18
TMEM40-204ENST00000435218 SCNN1GP51170 649 aa16.14■□□□□ 0.18
TMEM40-204ENST00000435218 VAV2P52735 878 aa16.14■□□□□ 0.18
TMEM40-204ENST00000435218 CCL23P55773 120 aa16.14■□□□□ 0.18
TMEM40-204ENST00000435218 TNNC1P63316 161 aa16.14■□□□□ 0.18
TMEM40-204ENST00000435218 GFPT1Q06210 699 aaPredicted RBP16.14■□□□□ 0.18
TMEM40-204ENST00000435218 SV2CQ496J9 727 aa16.14■□□□□ 0.18
TMEM40-204ENST00000435218 TMEM270Q6UE05 265 aa16.14■□□□□ 0.18
TMEM40-204ENST00000435218 NYAP1Q6ZVC0 841 aa16.14■□□□□ 0.18
TMEM40-204ENST00000435218 NOP9Q86U38 636 aaKnown RBP16.14■□□□□ 0.18
TMEM40-204ENST00000435218 SLC47A2Q86VL8 602 aa16.14■□□□□ 0.18
TMEM40-204ENST00000435218 GPIHBP1Q8IV16 184 aa16.14■□□□□ 0.18
TMEM40-204ENST00000435218 CRIPAKQ8N1N5 446 aa16.14■□□□□ 0.18
TMEM40-204ENST00000435218 TMEM130Q8N3G9 435 aa16.14■□□□□ 0.18
TMEM40-204ENST00000435218 RBBP8NLQ8NC74 664 aaPredicted RBP16.14■□□□□ 0.18
TMEM40-204ENST00000435218 DDX1Q92499 740 aaKnown RBP16.14■□□□□ 0.18
TMEM40-204ENST00000435218 NXF1Q9UBU9 619 aaKnown RBP16.14■□□□□ 0.18
TMEM40-204ENST00000435218 POLIQ9UNA4 740 aa16.14■□□□□ 0.18
TMEM40-204ENST00000435218 PCDHB4Q9Y5E5 795 aa16.14■□□□□ 0.18
TMEM40-204ENST00000435218 PJA2O43164 708 aa16.14■□□□□ 0.17
TMEM40-204ENST00000435218 CLSTN1O94985 981 aa16.14■□□□□ 0.17
TMEM40-204ENST00000435218 TUBB4AP04350 444 aa16.14■□□□□ 0.17
TMEM40-204ENST00000435218 FAM163BP0C2L3 166 aa16.14■□□□□ 0.17
TMEM40-204ENST00000435218 TAF6P49848 677 aa16.14■□□□□ 0.17
TMEM40-204ENST00000435218 AFF1P51825 1210 aaKnown RBP16.14■□□□□ 0.17
TMEM40-204ENST00000435218 CDR2Q01850 454 aa16.14■□□□□ 0.17
TMEM40-204ENST00000435218 LIMS2Q7Z4I7 341 aa16.14■□□□□ 0.17
TMEM40-204ENST00000435218 LNX1Q8TBB1 728 aaPredicted RBP16.14■□□□□ 0.17
TMEM40-204ENST00000435218 UROC1Q96N76 676 aa16.14■□□□□ 0.17
TMEM40-204ENST00000435218 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.14■□□□□ 0.17
TMEM40-204ENST00000435218 PCDHA13Q9Y5I0 950 aa16.14■□□□□ 0.17
TMEM40-204ENST00000435218 PTPRSQ13332 1948 aa16.13■□□□□ 0.17
TMEM40-204ENST00000435218 KPNA7A9QM74 516 aa16.13■□□□□ 0.17
TMEM40-204ENST00000435218 TIMP1P01033 207 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms