RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 DENND1AQ8TEH3 1009 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 PTCD3Q96EY7 689 aaKnown RBP7.87□□□□□ -1.15
CPSF6-202ENST00000435070 UBE2TQ9NPD8 197 aaPredicted RBP7.87□□□□□ -1.15
CPSF6-202ENST00000435070 DDX25Q9UHL0 483 aaKnown RBP7.87□□□□□ -1.15
CPSF6-202ENST00000435070 NENFQ9UMX5 172 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 RPL26L1Q9UNX3 145 aaKnown RBP7.87□□□□□ -1.15
CPSF6-202ENST00000435070 NCANO14594 1321 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 ADCY3O60266 1144 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 ALOX15P16050 662 aaPredicted RBP7.87□□□□□ -1.15
CPSF6-202ENST00000435070 VCLP18206 1134 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 PEX2P28328 305 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 GPC5P78333 572 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 PDE1CQ14123 709 aaPredicted RBP7.87□□□□□ -1.15
CPSF6-202ENST00000435070 FAM182AQ5T1J6 154 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 GRAMD4Q6IC98 578 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 C1orf228Q6PIY5 440 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 RHBDF2Q6PJF5 856 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 TCP10LQ8TDR4 215 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 AGPAT1Q99943 283 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 NUP85Q9BW27 656 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 TSSK1BQ9BXA7 367 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 CYP4F11Q9HBI6 524 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 TFCP2L1Q9NZI6 479 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 CALCAP01258 141 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 PDK3Q15120 406 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 SIX1Q15475 284 aaPredicted RBP7.87□□□□□ -1.15
CPSF6-202ENST00000435070 RABGAP1LQ5R372 815 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 LRRC43Q8N309 656 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 DAGLBQ8NCG7 672 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 KAT5Q92993 513 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 DGCR14Q96DF8 476 aaKnown RBP7.87□□□□□ -1.15
CPSF6-202ENST00000435070 RUSC1Q9BVN2 902 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 TRAIPQ9BWF2 469 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 SLC7A8Q9UHI5 535 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 PACSIN3Q9UKS6 424 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 BARX2Q9UMQ3 279 aaPredicted RBP7.87□□□□□ -1.15
CPSF6-202ENST00000435070 FER1L4A9Z1Z3 1794 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 TFPTP0C1Z6 253 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 HMGB2P26583 209 aaKnown RBP7.87□□□□□ -1.15
CPSF6-202ENST00000435070 MLH1P40692 756 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 PLCB3Q01970 1234 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 COG2Q14746 738 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 EFTUD2Q15029 972 aaKnown RBP eCLIP7.87□□□□□ -1.157e-7■■■■□ 20
CPSF6-202ENST00000435070 B3GNT6Q6ZMB0 384 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 NCCRP1Q6ZVX7 275 aaPredicted RBP7.87□□□□□ -1.15
CPSF6-202ENST00000435070 GPCPD1Q9NPB8 672 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 LRRC4BQ9NT99 713 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 TUBGCP4Q9UGJ1 667 aa7.87□□□□□ -1.15
CPSF6-202ENST00000435070 NFAT5O94916 1531 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 SORBS2O94875 1100 aaKnown RBP7.86□□□□□ -1.15
CPSF6-202ENST00000435070 CLPTM1O96005 669 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 ALDH1B1P30837 517 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 FXR2P51116 673 aaKnown RBP eCLIP7.86□□□□□ -1.15
CPSF6-202ENST00000435070 MARSP56192 900 aaKnown RBP7.86□□□□□ -1.15
CPSF6-202ENST00000435070 MECOMQ03112 1051 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 KAZNQ674X7 775 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 TRIM50Q86XT4 487 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 TREML1Q86YW5 311 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 ZNF564Q8TBZ8 553 aaPredicted RBP7.86□□□□□ -1.15
CPSF6-202ENST00000435070 OSBPL8Q9BZF1 889 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 PCDHA2Q9Y5H9 948 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 KAT6AQ92794 2004 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 IFNB1P01574 187 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 IVDP26440 423 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 HOXD13P35453 343 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 ALDH18A1P54886 795 aaKnown RBP7.86□□□□□ -1.15
CPSF6-202ENST00000435070 EDRF1Q3B7T1 1238 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 TMEM119Q4V9L6 283 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 ARSHQ5FYA8 562 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 KLHDC10Q6PID8 442 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 ZBED8Q8IZ13 594 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 POU5F2Q8N7G0 328 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 RILPQ96NA2 401 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 TUT1Q9H6E5 874 aaKnown RBP7.86□□□□□ -1.15
CPSF6-202ENST00000435070 MANSC1Q9H8J5 431 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 ZNF395Q9H8N7 513 aaPredicted RBP7.86□□□□□ -1.15
CPSF6-202ENST00000435070 USP29Q9HBJ7 922 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 TYW1Q9NV66 732 aaKnown RBP7.86□□□□□ -1.15
CPSF6-202ENST00000435070 LGALS13Q9UHV8 139 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 PCDH11YQ9BZA8 1340 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 ZMYM2Q9UBW7 1377 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 MAGEB2O15479 319 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 CALUO43852 315 aaPredicted RBP7.86□□□□□ -1.15
CPSF6-202ENST00000435070 RARBP10826 455 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 BGNP21810 368 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 VARSP26640 1264 aaKnown RBP7.86□□□□□ -1.15
CPSF6-202ENST00000435070 RGS2P41220 211 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 PPIDQ08752 370 aaKnown RBP7.86□□□□□ -1.15
CPSF6-202ENST00000435070 NADK2Q4G0N4 442 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 KLHL35Q6PF15 583 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 CLEC4GQ6UXB4 293 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 SLC30A10Q6XR72 485 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 ULK2Q8IYT8 1036 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 PCDHGB4Q9UN71 923 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 PCDHGB5Q9Y5G0 923 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 GMEB1Q9Y692 573 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 ZNF24P17028 368 aa7.86□□□□□ -1.15
CPSF6-202ENST00000435070 ARL1P40616 181 aaPredicted RBP7.86□□□□□ -1.15
CPSF6-202ENST00000435070 DCTN2Q13561 401 aaKnown RBP7.86□□□□□ -1.15
CPSF6-202ENST00000435070 ZNF568Q3ZCX4 644 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms