RNA–Protein interactions for RNA: ENST00000435067.2

LINC01055-201, Transcript of long intergenic non-protein coding RNA 1055, humanhuman

TSL 3 BASIC

Gene LINC01055, Length 1,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01055-201ENST00000435067 ASPAP45381 313 aa11.14□□□□□ -0.63
LINC01055-201ENST00000435067 EPHB4P54760 987 aa11.14□□□□□ -0.63
LINC01055-201ENST00000435067 WDR5P61964 334 aaKnown RBP11.14□□□□□ -0.63
LINC01055-201ENST00000435067 TUSC3Q13454 348 aa11.14□□□□□ -0.63
LINC01055-201ENST00000435067 FAM117BQ6P1L5 589 aa11.14□□□□□ -0.63
LINC01055-201ENST00000435067 LRRC52Q8N7C0 313 aa11.14□□□□□ -0.63
LINC01055-201ENST00000435067 SHC3Q92529 594 aa11.14□□□□□ -0.63
LINC01055-201ENST00000435067 CASD1Q96PB1 797 aa11.14□□□□□ -0.63
LINC01055-201ENST00000435067 MMS19Q96T76 1030 aa11.14□□□□□ -0.63
LINC01055-201ENST00000435067 CHP1Q99653 195 aa11.14□□□□□ -0.63
LINC01055-201ENST00000435067 BAG1Q99933 345 aaPredicted RBP11.14□□□□□ -0.63
LINC01055-201ENST00000435067 NUCKS1Q9H1E3 243 aaKnown RBP11.14□□□□□ -0.63
LINC01055-201ENST00000435067 VRTNQ9H8Y1 702 aa11.14□□□□□ -0.63
LINC01055-201ENST00000435067 TBC1D13Q9NVG8 400 aa11.14□□□□□ -0.63
LINC01055-201ENST00000435067 ZNHIT6Q9NWK9 470 aaKnown RBP11.14□□□□□ -0.63
LINC01055-201ENST00000435067 DAAM1Q9Y4D1 1078 aa11.14□□□□□ -0.63
LINC01055-201ENST00000435067 LTBP2Q14767 1821 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 TBKBP1A7MCY6 615 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 ZBBXA8MT70 800 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 KPNA7A9QM74 516 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 PODXLO00592 558 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 SPTLC1O15269 473 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 HOXA2O43364 376 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 B4GALT3O60512 393 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 AMHP03971 560 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 KRT5P13647 590 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 SOX5P35711 763 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 RAP1GAPP47736 663 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 TAF6P49848 677 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 CDH8P55286 799 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 LILRA4P59901 499 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 TNNC1P63316 161 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 CCZ1BP86790 482 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 CCZ1P86791 482 aaPredicted RBP11.13□□□□□ -0.63
LINC01055-201ENST00000435067 UPP1Q16831 310 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 PAN2Q504Q3 1202 aaKnown RBP11.13□□□□□ -0.63
LINC01055-201ENST00000435067 ENOSF1Q7L5Y1 443 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 TMEM139Q8IV31 216 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 C3orf58Q8NDZ4 430 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 TOP1MTQ969P6 601 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 FAM81BQ96LP2 452 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 ZNF560Q96MR9 790 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 FAM193BQ96PV7 902 aaPredicted RBP11.13□□□□□ -0.63
LINC01055-201ENST00000435067 SMYD3Q9H7B4 428 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 AIPL1Q9NZN9 384 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 KANSL3Q9P2N6 904 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 HCSTQ9UBK5 93 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 DNAJB4Q9UDY4 337 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 MYO6Q9UM54 1294 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 SNX9Q9Y5X1 595 aa11.13□□□□□ -0.63
LINC01055-201ENST00000435067 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC01055-201ENST00000435067 SOWAHDA6NJG2 315 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 EFCAB14O75071 495 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 DGKIO75912 1065 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 BAIAP3O94812 1187 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 STAU1O95793 577 aaKnown RBP11.12□□□□□ -0.63
LINC01055-201ENST00000435067 PLEKP08567 350 aaPredicted RBP11.12□□□□□ -0.63
LINC01055-201ENST00000435067 P4HA1P13674 534 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 HNRNPH3P31942 346 aaKnown RBP11.12□□□□□ -0.63
LINC01055-201ENST00000435067 RPL9P32969 192 aaKnown RBP11.12□□□□□ -0.63
LINC01055-201ENST00000435067 PNPLA4P41247 253 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 KCNJ6P48051 423 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 ASIC2Q16515 512 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 MEA1Q16626 185 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 TDRD12Q587J7 1177 aaKnown RBP11.12□□□□□ -0.63
LINC01055-201ENST00000435067 TMEM270Q6UE05 265 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 IRF2BP2Q7Z5L9 587 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 FAM71AQ8IYT1 594 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 HASPINQ8TF76 798 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 SYN2Q92777 582 aaPredicted RBP11.12□□□□□ -0.63
LINC01055-201ENST00000435067 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.12□□□□□ -0.63
LINC01055-201ENST00000435067 BCO2Q9BYV7 579 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 ACP6Q9NPH0 428 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 CISHQ9NSE2 258 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 PCDHB4Q9Y5E5 795 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 F8W810 466 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 CYP26A1O43174 497 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 NRDCO43847 1150 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 B3GAT3O94766 335 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 ACO1P21399 889 aaKnown RBP11.12□□□□□ -0.63
LINC01055-201ENST00000435067 OR1G1P47890 313 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 DSC1Q08554 894 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 KLHL30Q0D2K2 578 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 MAPK8IP2Q13387 824 aaPredicted RBP11.12□□□□□ -0.63
LINC01055-201ENST00000435067 SV2CQ496J9 727 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 ZNF394Q53GI3 561 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 TMEM240Q5SV17 173 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 HGSNATQ68CP4 663 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 CYP26C1Q6V0L0 522 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 COLGALT2Q8IYK4 626 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 CCDC112Q8NEF3 446 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 JAKMIP2Q96AA8 810 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 DDX27Q96GQ7 796 aaKnown RBP11.12□□□□□ -0.63
LINC01055-201ENST00000435067 UROC1Q96N76 676 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 LBHD1Q9BQE6 289 aaPredicted RBP11.12□□□□□ -0.63
LINC01055-201ENST00000435067 SDCBP2Q9H190 292 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 HAUS4Q9H6D7 363 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 ARHGAP20Q9P2F6 1191 aa11.12□□□□□ -0.63
LINC01055-201ENST00000435067 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.12□□□□□ -0.63
LINC01055-201ENST00000435067 FNDC1Q4ZHG4 1894 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms