RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 RNF44Q7L0R7 432 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 APBB1IPQ7Z5R6 666 aaPredicted RBP7.17□□□□□ -1.26
USP54-206ENST00000433394 SESTD1Q86VW0 696 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 ZNF354CQ86Y25 554 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 CPXCR1Q8N123 301 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 ATP11CQ8NB49 1132 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 SPATA5Q8NB90 893 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 CCDC150Q8NCX0 1101 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 GIMAP8Q8ND71 665 aaPredicted RBP7.17□□□□□ -1.26
USP54-206ENST00000433394 SMCR8Q8TEV9 937 aaPredicted RBP7.17□□□□□ -1.26
USP54-206ENST00000433394 SCAMP4Q969E2 229 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 MOGAT1Q96PD6 335 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 LRRC37BQ96QE4 947 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 DPYSL5Q9BPU6 564 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 NDC1Q9BTX1 674 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 CRB3Q9BUF7 120 aa7.17□□□□□ -1.26
USP54-206ENST00000433394 WDR12Q9GZL7 423 aaKnown RBP7.17□□□□□ -1.26
USP54-206ENST00000433394 A1CFQ9NQ94 594 aaKnown RBP7.17□□□□□ -1.26
USP54-206ENST00000433394 TRIM43BA6NCK2 446 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 ZNF785A8K8V0 405 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 ANXA2P07355 339 aaKnown RBP7.16□□□□□ -1.26
USP54-206ENST00000433394 IDEP14735 1019 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 TSHRP16473 764 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 HHEXQ03014 270 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 UBXN2BQ14CS0 331 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 BMT2Q1RMZ1 405 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 NT5DC1Q5TFE4 455 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 FANCBQ8NB91 859 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 MYRIPQ8NFW9 859 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 ZNF566Q969W8 418 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 KIAA1191Q96A73 305 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 TRIM43Q96BQ3 446 aaPredicted RBP7.16□□□□□ -1.26
USP54-206ENST00000433394 MPHOSPH9Q99550 1183 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 MYOCQ99972 504 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 GSTO2Q9H4Y5 243 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 FNIP2Q9P278 1114 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 SLC23A1Q9UHI7 598 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 ITGB1BP2Q9UKP3 347 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 TMX2Q9Y320 296 aa7.16□□□□□ -1.26
USP54-206ENST00000433394 NCK2O43639 380 aa7.15□□□□□ -1.26
USP54-206ENST00000433394 B4GALT3O60512 393 aa7.15□□□□□ -1.26
USP54-206ENST00000433394 INMTO95050 263 aa7.15□□□□□ -1.26
USP54-206ENST00000433394 GRPP07492 148 aa7.15□□□□□ -1.26
USP54-206ENST00000433394 HALP42357 657 aa7.15□□□□□ -1.26
USP54-206ENST00000433394 RPS16P62249 146 aaKnown RBP7.15□□□□□ -1.26
USP54-206ENST00000433394 GRM7Q14831 915 aa7.15□□□□□ -1.26
USP54-206ENST00000433394 C3orf38Q5JPI3 329 aa7.15□□□□□ -1.26
USP54-206ENST00000433394 UTP14CQ5TAP6 766 aaKnown RBP7.15□□□□□ -1.26
USP54-206ENST00000433394 HIBCHQ6NVY1 386 aaPredicted RBP7.15□□□□□ -1.26
USP54-206ENST00000433394 KRTAP19-1Q8IUB9 90 aa7.15□□□□□ -1.26
USP54-206ENST00000433394 YAF2Q8IY57 180 aa7.15□□□□□ -1.26
USP54-206ENST00000433394 CELF5Q8N6W0 485 aaKnown RBP7.15□□□□□ -1.26
USP54-206ENST00000433394 ZNF527Q8NB42 609 aa7.15□□□□□ -1.26
USP54-206ENST00000433394 SLC35B2Q8TB61 432 aa7.15□□□□□ -1.26
USP54-206ENST00000433394 CFHR4Q92496 578 aa7.15□□□□□ -1.26
USP54-206ENST00000433394 TMEM41AQ96HV5 264 aa7.15□□□□□ -1.26
USP54-206ENST00000433394 SNX22Q96L94 193 aa7.15□□□□□ -1.26
USP54-206ENST00000433394 KCNH6Q9H252 994 aa7.15□□□□□ -1.26
USP54-206ENST00000433394 FAM30AQ9NZY2 134 aa7.15□□□□□ -1.26
USP54-206ENST00000433394 PCDHGB2Q9Y5G2 931 aa7.15□□□□□ -1.26
USP54-206ENST00000433394 MORC2Q9Y6X9 1032 aaPredicted RBP7.15□□□□□ -1.26
USP54-206ENST00000433394 MBD3L4A6NDZ8 208 aaPredicted RBP7.14□□□□□ -1.27
USP54-206ENST00000433394 MBD3L3A6NE82 208 aaPredicted RBP7.14□□□□□ -1.27
USP54-206ENST00000433394 HNRNPDLO14979 420 aaKnown RBP7.14□□□□□ -1.27
USP54-206ENST00000433394 ZNF536O15090 1300 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 LAMTOR5O43504 91 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 NBNO60934 754 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 RASSF9O75901 435 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 UNC5CO95185 931 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 CNOT4O95628 575 aaKnown RBP7.14□□□□□ -1.27
USP54-206ENST00000433394 ABHD16AO95870 558 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 INHBBP09529 407 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 SBK3P0C264 359 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 KLRC1P26715 233 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 ZNF135P52742 658 aaPredicted RBP7.14□□□□□ -1.27
USP54-206ENST00000433394 PIGFQ07326 219 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 PMS2P11Q13670 270 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 BLMHQ13867 455 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 ELF2Q15723 593 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 ZNF648Q5T619 568 aaPredicted RBP7.14□□□□□ -1.27
USP54-206ENST00000433394 SLFN13Q68D06 897 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 FBXO38Q6PIJ6 1188 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 FAM9AQ8IZU1 332 aaPredicted RBP7.14□□□□□ -1.27
USP54-206ENST00000433394 TBC1D15Q8TC07 691 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 ST8SIA2Q92186 375 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 TMEM176AQ96HP8 235 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 TOX2Q96NM4 488 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 NAP1L4Q99733 375 aaKnown RBP7.14□□□□□ -1.27
USP54-206ENST00000433394 CNPPD1Q9BV87 410 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 DPH1Q9BZG8 443 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 GOLGA2P5Q9HBQ8 144 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 GPR35Q9HC97 309 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 ZNF212Q9UDV6 495 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 CDC23Q9UJX2 597 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 HDAC9Q9UKV0 1011 aa7.14□□□□□ -1.27
USP54-206ENST00000433394 KLRG2A4D1S0 409 aaPredicted RBP7.13□□□□□ -1.27
USP54-206ENST00000433394 CDHR4A6H8M9 788 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 PYCARD-AS1I3L0S3 204 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 FFAR2O15552 330 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 NOBOXO60393 691 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms