RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 EVLQ9UI08 416 aaPredicted RBP2.77□□□□□ -1.97
CDC40-204ENST00000431461 SCOCQ9UIL1 159 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 EID1Q9Y6B2 187 aa2.77□□□□□ -1.97
CDC40-204ENST00000431461 PJA2O43164 708 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 AKAP10O43572 662 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 AKR1B10O60218 316 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 ITGA10O75578 1167 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 LPLP06858 475 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 ALAS1P13196 640 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 CTSSP25774 331 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 FLT3LGP49771 235 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 CHN2P52757 468 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 EVA1CP58658 441 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 CDK17Q00537 523 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 CDC42EP1Q00587 391 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 OCA2Q04671 838 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 SP140Q13342 867 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 TRIM25Q14258 630 aaKnown RBP2.76□□□□□ -1.97
CDC40-204ENST00000431461 FAM47AQ5JRC9 791 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 FAM102BQ5T8I3 360 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 CCSAPQ6IQ19 270 aaPredicted RBP2.76□□□□□ -1.97
CDC40-204ENST00000431461 ABHD15Q6UXT9 468 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 C11orf96Q7Z7L8 435 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 LYSMD2Q8IV50 215 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 AOPEPQ8N6M6 819 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 NLGN4YQ8NFZ3 816 aaPredicted RBP2.76□□□□□ -1.97
CDC40-204ENST00000431461 OR7D4Q8NG98 312 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.76□□□□□ -1.97
CDC40-204ENST00000431461 TSPEARQ8WU66 669 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 TGFBRAP1Q8WUH2 860 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 JADE3Q92613 823 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 HOOK2Q96ED9 719 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 CEP95Q96GE4 821 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 C8orf48Q96LL4 319 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 UHRF1Q96T88 793 aaPredicted RBP2.76□□□□□ -1.97
CDC40-204ENST00000431461 MAP3K14Q99558 947 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 ALOXE3Q9BYJ1 711 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 CCDC8Q9H0W5 538 aaPredicted RBP2.76□□□□□ -1.97
CDC40-204ENST00000431461 FAM204AQ9H8W3 233 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 VTA1Q9NP79 307 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 KLHL11Q9NVR0 708 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 GPRC5DQ9NZD1 345 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 ZIM2Q9NZV7 527 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 CALCOCO1Q9P1Z2 691 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.76□□□□□ -1.97
CDC40-204ENST00000431461 EDARQ9UNE0 448 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 NOX1Q9Y5S8 564 aa2.76□□□□□ -1.97
CDC40-204ENST00000431461 FZD9O00144 591 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 TRIM38O00635 465 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 TSPAN6O43657 245 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 SNRPA1P09661 255 aaKnown RBP2.75□□□□□ -1.97
CDC40-204ENST00000431461 PF4V1P10720 104 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 OSMP13725 252 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 RAB27AP51159 221 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 CLRN1P58418 232 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 MRPS35P82673 323 aaKnown RBP2.75□□□□□ -1.97
CDC40-204ENST00000431461 KIF23Q02241 960 aaPredicted RBP2.75□□□□□ -1.97
CDC40-204ENST00000431461 UAP1L1Q3KQV9 507 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 MFSD14BQ5SR56 506 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 AKNAD1Q5T1N1 836 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 ATXN7L2Q5T6C5 722 aaPredicted RBP2.75□□□□□ -1.97
CDC40-204ENST00000431461 TSHZ3Q63HK5 1081 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 ZNF788Q6ZQV5 615 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 SRGAP1Q7Z6B7 1085 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 CCAR1Q8IX12 1150 aaKnown RBP2.75□□□□□ -1.97
CDC40-204ENST00000431461 DRC7Q8IY82 874 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 MYO1HQ8N1T3 1032 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 PDPRQ8NCN5 879 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 OR56A1Q8NGH5 318 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 MDM1Q8TC05 714 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 FBXO41Q8TF61 875 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 JPH3Q8WXH2 748 aaPredicted RBP2.75□□□□□ -1.97
CDC40-204ENST00000431461 RIN2Q8WYP3 895 aaPredicted RBP2.75□□□□□ -1.97
CDC40-204ENST00000431461 TTC17Q96AE7 1141 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 C1GALT1C1Q96EU7 318 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 SENP6Q9GZR1 1112 aaPredicted RBP2.75□□□□□ -1.97
CDC40-204ENST00000431461 REXO4Q9GZR2 422 aaKnown RBP2.75□□□□□ -1.97
CDC40-204ENST00000431461 SIK2Q9H0K1 926 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 C1orf112Q9NSG2 853 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 TDP1Q9NUW8 608 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 TBCCD1Q9NVR7 557 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 FAM30AQ9NZY2 134 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 LRIT1Q9P2V4 623 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 ARPP21Q9UBL0 812 aaPredicted RBP2.75□□□□□ -1.97
CDC40-204ENST00000431461 IP6K2Q9UHH9 426 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 DNM3Q9UQ16 869 aa2.75□□□□□ -1.97
CDC40-204ENST00000431461 PNPLA7Q6ZV29 1317 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 MANSC4A6NHS7 340 aaPredicted RBP2.74□□□□□ -1.97
CDC40-204ENST00000431461 FAM227AF5H4B4 570 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 TMEM127O75204 238 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 ANXA1P04083 346 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 GSPT1P15170 499 aaKnown RBP2.74□□□□□ -1.97
CDC40-204ENST00000431461 RPL17P18621 184 aaKnown RBP2.74□□□□□ -1.97
CDC40-204ENST00000431461 C5AR1P21730 350 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 CCKBRP32239 447 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 PROK1P58294 105 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 CREMQ03060 361 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 NOMO1Q15155 1222 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 PCBP2Q15366 365 aaKnown RBP eCLIP2.74□□□□□ -1.97
CDC40-204ENST00000431461 SRSF7Q16629 238 aaKnown RBP eCLIP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms