RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 NUCKS1Q9H1E3 243 aaKnown RBP12.05□□□□□ -0.48
SMPD4-205ENST00000431183 HMX1Q9NP08 348 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-205ENST00000431183 DUSP11O75319 330 aaKnown RBP12.05□□□□□ -0.48
SMPD4-205ENST00000431183 RRM1P23921 792 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 MTM1Q13496 603 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 PSMD6Q15008 389 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 ZNF618Q5T7W0 954 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 SCYL2Q6P3W7 929 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 NOTUMQ6P988 496 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 RSPH3Q86UC2 560 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 SLC9A9Q8IVB4 645 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 EMC1Q8N766 993 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 C1orf127Q8N9H9 656 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 HELQQ8TDG4 1101 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 MFSD14AQ96MC6 490 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 CGRRF1Q99675 332 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 NUP85Q9BW27 656 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 AGO3Q9H9G7 860 aaKnown RBP12.05□□□□□ -0.48
SMPD4-205ENST00000431183 ADAM22Q9P0K1 906 aa12.05□□□□□ -0.48
SMPD4-205ENST00000431183 RRN3P2A6NIE6 340 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 BUB1BO60566 1050 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-205ENST00000431183 MAP3K6O95382 1288 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 GNAT1P11488 350 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 SCNN1GP51170 649 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 MARSP56192 900 aaKnown RBP12.04□□□□□ -0.48
SMPD4-205ENST00000431183 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMPD4-205ENST00000431183 EPS8L1Q8TE68 723 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 ZMAT2Q96NC0 199 aaKnown RBP12.04□□□□□ -0.48
SMPD4-205ENST00000431183 UNC93B1Q9H1C4 597 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 KIAA1586Q9HCI6 787 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 PCSK1NQ9UHG2 260 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 KCNG1Q9UIX4 513 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 PTPRFP10586 1907 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 NT5C1B-RDH14C9J2C7 533 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 TM4SF4P48230 202 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 DYNLT1P63172 113 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 HLTFQ14527 1009 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMPD4-205ENST00000431183 SMC1AQ14683 1233 aaKnown RBP12.04□□□□□ -0.48
SMPD4-205ENST00000431183 TRIM58Q8NG06 486 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 ADAM2Q99965 735 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 A8MXQ7 604 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 M0QYV0 167 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 ASAP2O43150 1006 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 C4BPAP04003 597 aaKnown RBP12.04□□□□□ -0.48
SMPD4-205ENST00000431183 CLTAP09496 248 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 MARCKSL1P49006 195 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 ZPBP2Q6X784 338 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 STKLD1Q8NE28 680 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 LMO3Q8TAP4 145 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 FZD8Q9H461 694 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 AIPL1Q9NZN9 384 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 PTPN22Q9Y2R2 807 aa12.04□□□□□ -0.48
SMPD4-205ENST00000431183 F8W810 466 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 DARSP14868 501 aaKnown RBP12.03□□□□□ -0.48
SMPD4-205ENST00000431183 SMTNL2Q2TAL5 461 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 FIGNQ5HY92 759 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 CENPHQ9H3R5 247 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 CDC23Q9UJX2 597 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 CPSF3Q9UKF6 684 aaKnown RBP12.03□□□□□ -0.48
SMPD4-205ENST00000431183 ATP11BQ9Y2G3 1177 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 FKTNO75072 461 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 B3GAT3O94766 335 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 ATP11AP98196 1134 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 TRIP13Q15645 432 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-205ENST00000431183 FAM149B1Q96BN6 582 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 TWNKQ96RR1 684 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 PAAF1Q9BRP4 392 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 MED10Q9BTT4 135 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 KATNAL1Q9BW62 490 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 TMEM134Q9H6X4 195 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 L2HGDHQ9H9P8 463 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 PDE2AO00408 941 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-205ENST00000431183 HOXC6P09630 235 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 SPOUT1Q5T280 376 aaKnown RBP12.03□□□□□ -0.48
SMPD4-205ENST00000431183 CTU1Q7Z7A3 348 aaKnown RBP12.03□□□□□ -0.48
SMPD4-205ENST00000431183 EXOC8Q8IYI6 725 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 LRRN4Q8WUT4 740 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 NDRG1Q92597 394 aaKnown RBP12.03□□□□□ -0.48
SMPD4-205ENST00000431183 KRT12Q99456 494 aa12.03□□□□□ -0.48
SMPD4-205ENST00000431183 CELF4Q9BZC1 486 aaKnown RBP12.03□□□□□ -0.48
SMPD4-205ENST00000431183 ZSCAN5CA6NGD5 496 aaPredicted RBP12.02□□□□□ -0.48
SMPD4-205ENST00000431183 ATF7P17544 494 aaPredicted RBP12.02□□□□□ -0.48
SMPD4-205ENST00000431183 NAB2Q15742 525 aa12.02□□□□□ -0.48
SMPD4-205ENST00000431183 TMC2Q8TDI7 906 aa12.02□□□□□ -0.48
SMPD4-205ENST00000431183 TSGA10Q9BZW7 698 aa12.02□□□□□ -0.48
SMPD4-205ENST00000431183 ZWILCHQ9H900 591 aa12.02□□□□□ -0.48
SMPD4-205ENST00000431183 PADI3Q9ULW8 664 aa12.02□□□□□ -0.48
SMPD4-205ENST00000431183 TNFSF13BQ9Y275 285 aa12.02□□□□□ -0.48
SMPD4-205ENST00000431183 CYBAP13498 195 aa12.02□□□□□ -0.49
SMPD4-205ENST00000431183 SCP2P22307 547 aa12.02□□□□□ -0.49
SMPD4-205ENST00000431183 SCN4AP35499 1836 aa12.02□□□□□ -0.49
SMPD4-205ENST00000431183 ACLYP53396 1101 aa12.02□□□□□ -0.49
SMPD4-205ENST00000431183 RTP1P59025 263 aa12.02□□□□□ -0.49
SMPD4-205ENST00000431183 PLCB3Q01970 1234 aa12.02□□□□□ -0.49
SMPD4-205ENST00000431183 PAK2Q13177 524 aa12.02□□□□□ -0.49
SMPD4-205ENST00000431183 KCNT1Q5JUK3 1230 aa12.02□□□□□ -0.49
SMPD4-205ENST00000431183 SYCP2LQ5T4T6 812 aa12.02□□□□□ -0.49
SMPD4-205ENST00000431183 OR6B2Q6IFH4 312 aa12.02□□□□□ -0.49
SMPD4-205ENST00000431183 SLC27A1Q6PCB7 646 aa12.02□□□□□ -0.49
SMPD4-205ENST00000431183 TSHZ1Q6ZSZ6 1077 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms