RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 PTK6Q13882 451 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 SLC1A5Q15758 541 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 PKN2Q16513 984 aaKnown RBP7.63□□□□□ -1.19
COL28A1-202ENST00000430711 MSS51Q4VC12 460 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 IZUMO3Q5VZ72 239 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 CCDC91Q7Z6B0 441 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 MAP4K3Q8IVH8 894 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 C12orf56Q8IXR9 622 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 FBXL13Q8NEE6 735 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 NSMCE1Q8WV22 266 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 DYDC1Q8WWB3 177 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 CKAP2Q8WWK9 683 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 TMEM143Q96AN5 459 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 L3MBTL3Q96JM7 780 aaPredicted RBP7.63□□□□□ -1.19
COL28A1-202ENST00000430711 TGS1Q96RS0 853 aaKnown RBP7.63□□□□□ -1.19
COL28A1-202ENST00000430711 GMLQ99445 158 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 NAP1L3Q99457 506 aaPredicted RBP7.63□□□□□ -1.19
COL28A1-202ENST00000430711 PAIP2Q9BPZ3 127 aaKnown RBP7.63□□□□□ -1.19
COL28A1-202ENST00000430711 MFRPQ9BY79 579 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 TMEM8AQ9HCN3 771 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 GABBR1Q9UBS5 961 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 MTRF1LQ9UGC7 380 aaKnown RBP7.63□□□□□ -1.19
COL28A1-202ENST00000430711 COQ4Q9Y3A0 265 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 USP15Q9Y4E8 981 aaPredicted RBP7.63□□□□□ -1.19
COL28A1-202ENST00000430711 NUB1Q9Y5A7 615 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 PSME4Q14997 1843 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 KAT6AQ92794 2004 aa7.63□□□□□ -1.19
COL28A1-202ENST00000430711 RLFQ13129 1914 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 TCRBV7S3A2A0A539 114 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 F8VP50 259 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 HNRNPDLO14979 420 aaKnown RBP7.62□□□□□ -1.19
COL28A1-202ENST00000430711 MYBL1P10243 752 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 HARSP12081 509 aaKnown RBP7.62□□□□□ -1.19
COL28A1-202ENST00000430711 NQO1P15559 274 aaKnown RBP7.62□□□□□ -1.19
COL28A1-202ENST00000430711 ATP4AP20648 1035 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 TNFSF9P41273 254 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 NOP14P78316 857 aaKnown RBP7.62□□□□□ -1.19
COL28A1-202ENST00000430711 SETQ01105 290 aaPredicted RBP7.62□□□□□ -1.19
COL28A1-202ENST00000430711 BNIP1Q12981 228 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 MAMLD1Q13495 774 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 ITIH4Q14624 930 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 P3H1Q32P28 736 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 WDR72Q3MJ13 1102 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 ZNF394Q53GI3 561 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 PLEKHG4Q58EX7 1191 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 SPDYCQ5MJ68 293 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 ANKRD22Q5VYY1 191 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 MFSD7Q6UXD7 560 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 DLK2Q6UY11 383 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 C15orf39Q6ZRI6 1047 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 ANKMY2Q8IV38 441 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 MAML1Q92585 1016 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 SNF8Q96H20 258 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 MFSD14AQ96MC6 490 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 FBXL18Q96ME1 805 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 NT5C1BQ96P26 610 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 KLF6Q99612 283 aaPredicted RBP7.62□□□□□ -1.19
COL28A1-202ENST00000430711 MRIQ9BWK5 157 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 MYLK2Q9H1R3 596 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 TMEM206Q9H813 350 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 ALG13Q9NP73 1137 aaKnown RBP7.62□□□□□ -1.19
COL28A1-202ENST00000430711 SAMD15Q9P1V8 674 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 POC1B-GALNT4F8VUJ3 575 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 HLA-DRAP01903 254 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 PECAM1P16284 738 aaPredicted RBP7.62□□□□□ -1.19
COL28A1-202ENST00000430711 TARSP26639 723 aaKnown RBP7.62□□□□□ -1.19
COL28A1-202ENST00000430711 RPA3P35244 121 aaPredicted RBP7.62□□□□□ -1.19
COL28A1-202ENST00000430711 SSR1P43307 286 aaKnown RBP7.62□□□□□ -1.19
COL28A1-202ENST00000430711 CDR1P51861 262 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 MFAP3P55082 362 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 NOMO3P69849 1222 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 CALCOCO2Q13137 446 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 TAF5Q15542 800 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 PCNX4Q63HM2 1172 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 TMEM270Q6UE05 265 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 STXBP4Q6ZWJ1 553 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 ASRGL1Q7L266 308 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 SPATA21Q7Z572 469 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 NLGN1Q8N2Q7 840 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 ASAP3Q8TDY4 903 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 FAM151AQ8WW52 585 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 ATG4CQ96DT6 458 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 RMDN3Q96TC7 470 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 PDCD2LQ9BRP1 358 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 KMT5AQ9NQR1 393 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 KCND2Q9NZV8 630 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 ADAM22Q9P0K1 906 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 WHRNQ9P202 907 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 KANSL3Q9P2N6 904 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 ANAPC5Q9UJX4 755 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 CHKBQ9Y259 395 aa7.62□□□□□ -1.19
COL28A1-202ENST00000430711 GOLGA8RI6L899 631 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 DIAPH2O60879 1101 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 CBX6O95503 412 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 ANP32DO95626 131 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 CST3P01034 146 aaPredicted RBP7.61□□□□□ -1.19
COL28A1-202ENST00000430711 CD48P09326 243 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 T-ENOLP0DO92 83 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 ATF2P15336 505 aa7.61□□□□□ -1.19
COL28A1-202ENST00000430711 ABL2P42684 1182 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms