RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 MIPOL1Q8TD10 442 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 ANKRD36CQ5JPF3 1778 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 EFCAB14O75071 495 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 ATP5DP30049 168 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 GPAT2Q6NUI2 795 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 RAB17Q9H0T7 212 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 Q9Y3F1 56 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 MOCS2O96007 188 aaPredicted RBP13.68□□□□□ -0.22
PTCH1-207ENST00000429896 UCHL3P15374 230 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 ACADSBP45954 432 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 LBX1P52954 281 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 TAP1Q03518 808 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 GFPT1Q06210 699 aaPredicted RBP13.68□□□□□ -0.22
PTCH1-207ENST00000429896 CUL2Q13617 745 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 ASB7Q9H672 318 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 SUDS3Q9H7L9 328 aaPredicted RBP13.68□□□□□ -0.22
PTCH1-207ENST00000429896 ADAMTS7Q9UKP4 1686 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 MCF2LO15068 1137 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 PARNO95453 639 aaKnown RBP13.68□□□□□ -0.22
PTCH1-207ENST00000429896 LHX1P48742 406 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 SEPT6Q14141 434 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 ANO5Q75V66 913 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 SEMA6BQ9H3T3 888 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 IP6K2Q9UHH9 426 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 ST3GAL5Q9UNP4 418 aa13.68□□□□□ -0.22
PTCH1-207ENST00000429896 TTC26A0AVF1 554 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 FTLP02792 175 aaPredicted RBP13.67□□□□□ -0.22
PTCH1-207ENST00000429896 ADCY8P40145 1251 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 ZNF792Q3KQV3 632 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 TDRD10Q5VZ19 366 aaKnown RBP13.67□□□□□ -0.22
PTCH1-207ENST00000429896 NUP85Q9BW27 656 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 EMILIN2Q9BXX0 1053 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 PARVAQ9NVD7 372 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 ZNF536O15090 1300 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 HSPA6P17066 643 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 CCND3P30281 292 aaPredicted RBP13.67□□□□□ -0.22
PTCH1-207ENST00000429896 RGS7P49802 495 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 LMNB2Q03252 620 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 CACNB2Q08289 660 aaPredicted RBP13.67□□□□□ -0.22
PTCH1-207ENST00000429896 CAPSQ13938 189 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 WHAMMP3Q1A5X7 153 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 PALM2Q8IXS6 379 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 RUNDC3BQ96NL0 473 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 A0A1B0GTH6 734 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 FAM200BP0CF97 657 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 SLC12A1Q13621 1099 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 EFHC2Q5JST6 749 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 CAPN11Q9UMQ6 739 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 I3L4J1 428 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 NDUFAB1O14561 156 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 PPP6R3Q5H9R7 873 aaPredicted RBP13.67□□□□□ -0.22
PTCH1-207ENST00000429896 CCDC62Q6P9F0 684 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 VSIG1Q86XK7 387 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 NT5DC4Q86YG4 428 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 DHX38Q92620 1227 aaKnown RBP13.67□□□□□ -0.22
PTCH1-207ENST00000429896 KRT12Q99456 494 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 CACYBPQ9HB71 228 aaKnown RBP13.67□□□□□ -0.22
PTCH1-207ENST00000429896 TNFSF13BQ9Y275 285 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 PCDHB2Q9Y5E7 798 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 MYH14Q7Z406 1995 aaKnown RBP13.67□□□□□ -0.22
PTCH1-207ENST00000429896 SLC9A1P19634 815 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 ADCY1Q08828 1119 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 FBXO47Q5MNV8 452 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 APBB2Q92870 758 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 IRAK4Q9NWZ3 460 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 PTPN22Q9Y2R2 807 aa13.67□□□□□ -0.22
PTCH1-207ENST00000429896 CYBBP04839 570 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 SPATA31C1P0DKV0 1188 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 DNAJB2P25686 324 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 CASP4P49662 377 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 SULT1E1P49888 294 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 PPIGQ13427 754 aaKnown RBP eCLIP13.66□□□□□ -0.22
PTCH1-207ENST00000429896 TMTC4Q5T4D3 741 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 BZW1Q7L1Q6 419 aaKnown RBP13.66□□□□□ -0.22
PTCH1-207ENST00000429896 ARHGAP18Q8N392 663 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 PARD3BQ8TEW8 1205 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 C18orf8Q96DM3 657 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 CHST12Q9NRB3 414 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 A0A087X0B3 334 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 PIK3R2O00459 728 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 FTCDO95954 541 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 RFC1P35251 1148 aaPredicted RBP13.66□□□□□ -0.22
PTCH1-207ENST00000429896 RPS6KA2Q15349 733 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 ZNF564Q8TBZ8 553 aaPredicted RBP13.66□□□□□ -0.22
PTCH1-207ENST00000429896 EXOC4Q96A65 974 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 DPH5Q9H2P9 285 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 MAFBQ9Y5Q3 323 aaPredicted RBP13.66□□□□□ -0.22
PTCH1-207ENST00000429896 LACTBL1A8MY62 500 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 ACLYP53396 1101 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 IL17AQ16552 155 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 NUDT18Q6ZVK8 323 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 LRRC8DQ7L1W4 858 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 GBP7Q8N8V2 638 aaPredicted RBP13.66□□□□□ -0.22
PTCH1-207ENST00000429896 RPGRIP1Q96KN7 1286 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 TSPYL2Q9H2G4 693 aaPredicted RBP13.66□□□□□ -0.22
PTCH1-207ENST00000429896 HPCAL4Q9UM19 191 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 FHOD1Q9Y613 1164 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 SGK1O00141 431 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 ERCC6LQ2NKX8 1250 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 DARS2Q6PI48 645 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms