RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 TNFAIP2Q03169 654 aa18.41■□□□□ 0.54
PRDM5-203ENST00000428209 PPFIA1Q13136 1202 aa18.41■□□□□ 0.54
PRDM5-203ENST00000428209 AMHR2Q16671 573 aa18.41■□□□□ 0.54
PRDM5-203ENST00000428209 SCARA5Q6ZMJ2 495 aa18.41■□□□□ 0.54
PRDM5-203ENST00000428209 PHF13Q86YI8 300 aaPredicted RBP18.41■□□□□ 0.54
PRDM5-203ENST00000428209 IFNLR1Q8IU57 520 aaPredicted RBP18.41■□□□□ 0.54
PRDM5-203ENST00000428209 NPLOC4Q8TAT6 608 aa18.41■□□□□ 0.54
PRDM5-203ENST00000428209 NLRP7Q8WX94 980 aa18.41■□□□□ 0.54
PRDM5-203ENST00000428209 CPB2Q96IY4 423 aa18.41■□□□□ 0.54
PRDM5-203ENST00000428209 SCLT1Q96NL6 688 aa18.41■□□□□ 0.54
PRDM5-203ENST00000428209 RUFY1Q96T51 708 aa18.41■□□□□ 0.54
PRDM5-203ENST00000428209 MMP3P08254 477 aa18.4■□□□□ 0.54
PRDM5-203ENST00000428209 MCF2P10911 925 aa18.4■□□□□ 0.54
PRDM5-203ENST00000428209 ECHS1P30084 290 aa18.4■□□□□ 0.54
PRDM5-203ENST00000428209 GRIK4Q16099 956 aa18.4■□□□□ 0.54
PRDM5-203ENST00000428209 DGKDQ16760 1214 aa18.4■□□□□ 0.54
PRDM5-203ENST00000428209 IQSEC1Q6DN90 963 aa18.4■□□□□ 0.54
PRDM5-203ENST00000428209 PPP1R2P3Q6NXS1 205 aa18.4■□□□□ 0.54
PRDM5-203ENST00000428209 MMS22LQ6ZRQ5 1243 aa18.4■□□□□ 0.54
PRDM5-203ENST00000428209 GOLGA6L1Q8N7Z2 621 aa18.4■□□□□ 0.54
PRDM5-203ENST00000428209 XYLT2Q9H1B5 865 aa18.4■□□□□ 0.54
PRDM5-203ENST00000428209 MRPL47Q9HD33 250 aaKnown RBP18.4■□□□□ 0.54
PRDM5-203ENST00000428209 MREGQ8N565 214 aa18.4■□□□□ 0.54
PRDM5-203ENST00000428209 TRIM51Q9BSJ1 452 aa18.4■□□□□ 0.54
PRDM5-203ENST00000428209 RAB17Q9H0T7 212 aa18.4■□□□□ 0.54
PRDM5-203ENST00000428209 PDZD7Q9H5P4 517 aa18.4■□□□□ 0.54
PRDM5-203ENST00000428209 NXF1Q9UBU9 619 aaKnown RBP18.4■□□□□ 0.54
PRDM5-203ENST00000428209 LACTBL1A8MY62 500 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 PHF2O75151 1096 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 ARF4P18085 180 aaPredicted RBP18.39■□□□□ 0.53
PRDM5-203ENST00000428209 SLC1A1P43005 524 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 C1QBPQ07021 282 aaKnown RBP18.39■□□□□ 0.53
PRDM5-203ENST00000428209 CFAP58Q5T655 872 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 SLC13A5Q86YT5 568 aaPredicted RBP18.39■□□□□ 0.53
PRDM5-203ENST00000428209 PRELID2Q8N945 189 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 SEC14L1Q92503 715 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 EXOC4Q96A65 974 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 MAGOHBQ96A72 148 aaKnown RBP18.39■□□□□ 0.53
PRDM5-203ENST00000428209 PLVAPQ9BX97 442 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 TRIM31Q9BZY9 425 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 DPH5Q9H2P9 285 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 FAM204AQ9H8W3 233 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 SLC5A4Q9NY91 659 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 CPA4Q9UI42 421 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 MTUS1Q9ULD2 1270 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 ANK1P16157 1881 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 SLC15A5A6NIM6 579 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 OPA1O60313 960 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 NFICP08651 508 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 BRD2P25440 801 aaKnown RBP18.39■□□□□ 0.53
PRDM5-203ENST00000428209 CHRNA3P32297 505 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 ASPAP45381 313 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 MAMLD1Q13495 774 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 DHX34Q14147 1143 aaKnown RBP18.39■□□□□ 0.53
PRDM5-203ENST00000428209 MARCH8Q5T0T0 291 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 ZDHHC14Q8IZN3 488 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 C18orf8Q96DM3 657 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 ZIM3Q96PE6 472 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 FAM114A2Q9NRY5 505 aa18.39■□□□□ 0.53
PRDM5-203ENST00000428209 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.39■□□□□ 0.53
PRDM5-203ENST00000428209 MGAMO43451 1857 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 KAT6AQ92794 2004 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 PTP4A2Q12974 167 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 JADE1Q6IE81 842 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 NEUROG2Q9H2A3 272 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.38■□□□□ 0.53
PRDM5-203ENST00000428209 POLIQ9UNA4 740 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 SCINQ9Y6U3 715 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 TCRBV7S2A1N4TA0A589 114 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 FAM187AA6NFU0 413 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 ADCY6O43306 1168 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 PROSCO94903 275 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 ERLIN2O94905 339 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 HOXD8P13378 290 aaPredicted RBP18.38■□□□□ 0.53
PRDM5-203ENST00000428209 YWHAEP62258 255 aaKnown RBP18.38■□□□□ 0.53
PRDM5-203ENST00000428209 WDR72Q3MJ13 1102 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 PLEKHA7Q6IQ23 1121 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 KIAA0319LQ8IZA0 1049 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 IQCKQ8N0W5 287 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 C1orf127Q8N9H9 656 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 ERP44Q9BS26 406 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 PARVAQ9NVD7 372 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 SIX4Q9UIU6 781 aa18.38■□□□□ 0.53
PRDM5-203ENST00000428209 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.38■□□□□ 0.53
PRDM5-203ENST00000428209 DYNC1LI2O43237 492 aaPredicted RBP18.37■□□□□ 0.53
PRDM5-203ENST00000428209 MMP8P22894 467 aa18.37■□□□□ 0.53
PRDM5-203ENST00000428209 CYP2C19P33261 490 aa18.37■□□□□ 0.53
PRDM5-203ENST00000428209 HSPA9P38646 679 aaKnown RBP18.37■□□□□ 0.53
PRDM5-203ENST00000428209 LLGL1Q15334 1064 aa18.37■□□□□ 0.53
PRDM5-203ENST00000428209 ZNF667Q5HYK9 610 aa18.37■□□□□ 0.53
PRDM5-203ENST00000428209 JAMLQ86YT9 394 aa18.37■□□□□ 0.53
PRDM5-203ENST00000428209 SH3GL2Q99962 352 aa18.37■□□□□ 0.53
PRDM5-203ENST00000428209 ZSWIM8A7E2V4 1837 aa18.37■□□□□ 0.53
PRDM5-203ENST00000428209 TLR3O15455 904 aaKnown RBP18.37■□□□□ 0.53
PRDM5-203ENST00000428209 ITGB3P05106 788 aa18.37■□□□□ 0.53
PRDM5-203ENST00000428209 HUNKP57058 714 aa18.37■□□□□ 0.53
PRDM5-203ENST00000428209 PRAMEF19Q5SWL8 479 aa18.37■□□□□ 0.53
PRDM5-203ENST00000428209 CST9Q5W186 159 aa18.37■□□□□ 0.53
PRDM5-203ENST00000428209 CCDC137Q6PK04 289 aaKnown RBP18.37■□□□□ 0.53
PRDM5-203ENST00000428209 TMEM35BQ8NCS4 154 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms