RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 PTPRJQ12913 1337 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 SPDYE4A6NLX3 237 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 H7C4K7 107 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 ZMYND10O75800 440 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 OAZ2O95190 189 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 ANP32AP39687 249 aaKnown RBP18.05■□□□□ 0.48
VRK2-204ENST00000428021 CYP2J2P51589 502 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 TFAMQ00059 246 aaKnown RBP18.05■□□□□ 0.48
VRK2-204ENST00000428021 ROR1Q01973 937 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 FAM160A1Q05DH4 1040 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 KCNB1Q14721 858 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 ELMSAN1Q6PJG2 1045 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 C1orf127Q8N9H9 656 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 BORCS6Q96GS4 357 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 RPGRIP1Q96KN7 1286 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 SENP8Q96LD8 212 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 CHMP5Q9NZZ3 219 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 FBXL5Q9UKA1 691 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 TRIOO75962 3097 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 DENND4AQ7Z401 1863 aa18.05■□□□□ 0.48
VRK2-204ENST00000428021 GADD45BO75293 160 aaPredicted RBP18.04■□□□□ 0.48
VRK2-204ENST00000428021 ABLIM3O94929 683 aa18.04■□□□□ 0.48
VRK2-204ENST00000428021 PAX3P23760 479 aa18.04■□□□□ 0.48
VRK2-204ENST00000428021 PNOCQ13519 176 aa18.04■□□□□ 0.48
VRK2-204ENST00000428021 SNRNP35Q16560 246 aaKnown RBP18.04■□□□□ 0.48
VRK2-204ENST00000428021 CTXN3Q4LDR2 81 aa18.04■□□□□ 0.48
VRK2-204ENST00000428021 DSTYKQ6XUX3 929 aa18.04■□□□□ 0.48
VRK2-204ENST00000428021 XXYLT1Q8NBI6 393 aa18.04■□□□□ 0.48
VRK2-204ENST00000428021 RDH13Q8NBN7 331 aa18.04■□□□□ 0.48
VRK2-204ENST00000428021 INTS13Q9NVM9 706 aa18.04■□□□□ 0.48
VRK2-204ENST00000428021 DMAC2Q9NW81 257 aa18.04■□□□□ 0.48
VRK2-204ENST00000428021 ZDHHC7Q9NXF8 308 aa18.04■□□□□ 0.48
VRK2-204ENST00000428021 DOCK6Q96HP0 2047 aa18.04■□□□□ 0.48
VRK2-204ENST00000428021 WDR27A2RRH5 827 aa18.03■□□□□ 0.48
VRK2-204ENST00000428021 TYMPP19971 482 aa18.03■□□□□ 0.48
VRK2-204ENST00000428021 YWHAHQ04917 246 aaPredicted RBP18.03■□□□□ 0.48
VRK2-204ENST00000428021 LMBRD2Q68DH5 695 aaPredicted RBP18.03■□□□□ 0.48
VRK2-204ENST00000428021 ZNF280DQ6N043 979 aa18.03■□□□□ 0.48
VRK2-204ENST00000428021 CYP26C1Q6V0L0 522 aa18.03■□□□□ 0.48
VRK2-204ENST00000428021 RNF135Q8IUD6 432 aa18.03■□□□□ 0.48
VRK2-204ENST00000428021 OR5B17Q8NGF7 314 aa18.03■□□□□ 0.48
VRK2-204ENST00000428021 ZNF461Q8TAF7 563 aa18.03■□□□□ 0.48
VRK2-204ENST00000428021 CACTINQ8WUQ7 758 aaKnown RBP18.03■□□□□ 0.48
VRK2-204ENST00000428021 TMEM174Q8WUU8 243 aa18.03■□□□□ 0.48
VRK2-204ENST00000428021 CCDC47Q96A33 483 aaKnown RBP18.03■□□□□ 0.48
VRK2-204ENST00000428021 TIGD1Q96MW7 591 aa18.03■□□□□ 0.48
VRK2-204ENST00000428021 PRKD2Q9BZL6 878 aa18.03■□□□□ 0.48
VRK2-204ENST00000428021 GZF1Q9H116 711 aaPredicted RBP18.03■□□□□ 0.48
VRK2-204ENST00000428021 EPHX3Q9H6B9 360 aa18.03■□□□□ 0.48
VRK2-204ENST00000428021 SIX4Q9UIU6 781 aa18.03■□□□□ 0.48
VRK2-204ENST00000428021 TSC2P49815 1807 aa18.02■□□□□ 0.48
VRK2-204ENST00000428021 TULP1O00294 542 aaPredicted RBP18.02■□□□□ 0.48
VRK2-204ENST00000428021 PDXKO00764 312 aa18.02■□□□□ 0.48
VRK2-204ENST00000428021 ITGB3P05106 788 aa18.02■□□□□ 0.48
VRK2-204ENST00000428021 CYP11A1P05108 521 aa18.02■□□□□ 0.48
VRK2-204ENST00000428021 C8AP07357 584 aa18.02■□□□□ 0.48
VRK2-204ENST00000428021 SP100P23497 879 aaPredicted RBP18.02■□□□□ 0.48
VRK2-204ENST00000428021 POLR2BP30876 1174 aaKnown RBP18.02■□□□□ 0.48
VRK2-204ENST00000428021 TAF6P49848 677 aa18.02■□□□□ 0.48
VRK2-204ENST00000428021 CYP24A1Q07973 514 aa18.02■□□□□ 0.48
VRK2-204ENST00000428021 PSMD6Q15008 389 aa18.02■□□□□ 0.48
VRK2-204ENST00000428021 SURF1Q15526 300 aa18.02■□□□□ 0.48
VRK2-204ENST00000428021 SLC9A9Q8IVB4 645 aa18.02■□□□□ 0.48
VRK2-204ENST00000428021 CSGALNACT2Q8N6G5 542 aa18.02■□□□□ 0.48
VRK2-204ENST00000428021 GOLGA5Q8TBA6 731 aa18.02■□□□□ 0.48
VRK2-204ENST00000428021 SMG7Q92540 1137 aaKnown RBP18.02■□□□□ 0.48
VRK2-204ENST00000428021 MFSD14AQ96MC6 490 aa18.02■□□□□ 0.48
VRK2-204ENST00000428021 MTMR12Q9C0I1 747 aa18.02■□□□□ 0.48
VRK2-204ENST00000428021 AGAP1Q9UPQ3 857 aa18.02■□□□□ 0.48
VRK2-204ENST00000428021 C2CD4DB7Z1M9 353 aa18.01■□□□□ 0.47
VRK2-204ENST00000428021 PI4K2BG5E9Z4 385 aa18.01■□□□□ 0.47
VRK2-204ENST00000428021 CYB561D2O14569 222 aa18.01■□□□□ 0.47
VRK2-204ENST00000428021 HNRNPA1P09651 372 aaKnown RBP eCLIP18.01■□□□□ 0.47
VRK2-204ENST00000428021 ODC1P11926 461 aa18.01■□□□□ 0.47
VRK2-204ENST00000428021 HOXA9P31269 272 aa18.01■□□□□ 0.47
VRK2-204ENST00000428021 ARPP19P56211 112 aa18.01■□□□□ 0.47
VRK2-204ENST00000428021 UVSSAQ2YD98 709 aa18.01■□□□□ 0.47
VRK2-204ENST00000428021 LIN9Q5TKA1 542 aa18.01■□□□□ 0.47
VRK2-204ENST00000428021 USP37Q86T82 979 aa18.01■□□□□ 0.47
VRK2-204ENST00000428021 WDR49Q8IV35 697 aa18.01■□□□□ 0.47
VRK2-204ENST00000428021 SPATA20Q8TB22 786 aa18.01■□□□□ 0.47
VRK2-204ENST00000428021 SLC7A14Q8TBB6 771 aa18.01■□□□□ 0.47
VRK2-204ENST00000428021 CCDC34Q96HJ3 373 aa18.01■□□□□ 0.47
VRK2-204ENST00000428021 WDR6Q9NNW5 1121 aaKnown RBP18.01■□□□□ 0.47
VRK2-204ENST00000428021 TSHZ2Q9NRE2 1034 aa18.01■□□□□ 0.47
VRK2-204ENST00000428021 ITGA11Q9UKX5 1188 aa18.01■□□□□ 0.47
VRK2-204ENST00000428021 MAPK8IP1Q9UQF2 711 aa18.01■□□□□ 0.47
VRK2-204ENST00000428021 KPNA7A9QM74 516 aa18■□□□□ 0.47
VRK2-204ENST00000428021 EXOC3O60645 756 aa18■□□□□ 0.47
VRK2-204ENST00000428021 SEC24AO95486 1093 aa18■□□□□ 0.47
VRK2-204ENST00000428021 VNN2O95498 520 aa18■□□□□ 0.47
VRK2-204ENST00000428021 TMEM191BP0C7N4 346 aa18■□□□□ 0.47
VRK2-204ENST00000428021 ATF2P15336 505 aa18■□□□□ 0.47
VRK2-204ENST00000428021 PNPLA4P41247 253 aa18■□□□□ 0.47
VRK2-204ENST00000428021 DUOXA2Q1HG44 320 aa18■□□□□ 0.47
VRK2-204ENST00000428021 SV2CQ496J9 727 aa18■□□□□ 0.47
VRK2-204ENST00000428021 PPM1LQ5SGD2 360 aa18■□□□□ 0.47
VRK2-204ENST00000428021 TPGS2Q68CL5 300 aa18■□□□□ 0.47
VRK2-204ENST00000428021 OVOS1Q6IE37 1185 aa18■□□□□ 0.47
VRK2-204ENST00000428021 RTL10Q7L3V2 364 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms