RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 GLIS1Q8NBF1 620 aa5.33□□□□□ -1.56
NUDCD1-202ENST00000427660 HDAC2Q92769 488 aaKnown RBP5.33□□□□□ -1.56
NUDCD1-202ENST00000427660 DDX17Q92841 729 aaKnown RBP5.33□□□□□ -1.56
NUDCD1-202ENST00000427660 SNX27Q96L92 541 aa5.33□□□□□ -1.56
NUDCD1-202ENST00000427660 PYM1Q9BRP8 204 aaKnown RBP5.33□□□□□ -1.56
NUDCD1-202ENST00000427660 CNPPD1Q9BV87 410 aa5.33□□□□□ -1.56
NUDCD1-202ENST00000427660 OSBPL5Q9H0X9 879 aaPredicted RBP5.33□□□□□ -1.56
NUDCD1-202ENST00000427660 UBN1Q9NPG3 1134 aa5.33□□□□□ -1.56
NUDCD1-202ENST00000427660 USP40Q9NVE5 1235 aa5.33□□□□□ -1.56
NUDCD1-202ENST00000427660 RGL1Q9NZL6 768 aa5.33□□□□□ -1.56
NUDCD1-202ENST00000427660 CDC42EP3Q9UKI2 254 aa5.33□□□□□ -1.56
NUDCD1-202ENST00000427660 PRSS47A8MTI9 375 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 KIAA1324LA8MWY0 1029 aaPredicted RBP5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 NRP1O14786 923 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 GRM6O15303 877 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 KCNQ3O43525 872 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 INMTO95050 263 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 HMGCRP04035 888 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 GNAI2P04899 355 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 CAPN3P20807 821 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 SMAD4Q13485 552 aaKnown RBP5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 ADCK5Q3MIX3 580 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 VPS53Q5VIR6 699 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 ZNF280DQ6N043 979 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 YAF2Q8IY57 180 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 KYQ8NBH2 561 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 REPS2Q8NFH8 660 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 SMARCC2Q8TAQ2 1214 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 OTUD7AQ8TE49 926 aaPredicted RBP5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 GORASP1Q9BQQ3 440 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 KATNBL1Q9H079 304 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 SAYSD1Q9NPB0 183 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 ING3Q9NXR8 418 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 KIF17Q9P2E2 1029 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 IGSF9Q9P2J2 1179 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 ITGB1BP2Q9UKP3 347 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 PLEKHM1Q9Y4G2 1056 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 PRSS29PA6NIE9 313 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 HOXC11O43248 304 aaPredicted RBP5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 SLC43A1O75387 559 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 NDST3O95803 873 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 RARBP10826 455 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 CKMT1AP12532 417 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 XBP1P17861 261 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 IL1R2P27930 398 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 VIPR1P32241 457 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 KRT9P35527 623 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 ALDH1A3P47895 512 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 CD97P48960 835 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 KCNQ1P51787 676 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 NOMO3P69849 1222 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 TLE2Q04725 743 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 FAM110CQ1W6H9 321 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 FAM47AQ5JRC9 791 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 PRAMEF14Q5SWL7 426 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 LIN54Q6MZP7 749 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 MOGAT3Q86VF5 341 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 GATAD2AQ86YP4 633 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 RTKN2Q8IZC4 609 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 ESX1Q8N693 406 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 SIMC1Q8NDZ2 872 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 IPO4Q8TEX9 1081 aaKnown RBP5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 STYXQ8WUJ0 223 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 STON2Q8WXE9 905 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 ASB12Q8WXK4 309 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 LRRC46Q96FV0 321 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 KIRREL1Q96J84 757 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 ZSWIM3Q96MP5 696 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 C11orf84Q9BUA3 381 aaPredicted RBP5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 BRD9Q9H8M2 597 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 SMC4Q9NTJ3 1288 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 GGA3Q9NZ52 723 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 IFT80Q9P2H3 777 aaPredicted RBP5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 CROTQ9UKG9 612 aa5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 CTDP1Q9Y5B0 961 aaPredicted RBP5.32□□□□□ -1.56
NUDCD1-202ENST00000427660 hCG_1984214I3L0E3 225 aa5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 ZNF500O60304 480 aaPredicted RBP5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 FAM155BO75949 473 aa5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 CD4P01730 458 aa5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 ANXA1P04083 346 aa5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 A1BGP04217 495 aa5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 GJB1P08034 283 aa5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 ITGA2BP08514 1039 aa5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 MEOX1P50221 254 aa5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 ZNF792Q3KQV3 632 aa5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 SEM1Q6ZVN7 128 aa5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 LINC00482Q8N8I6 264 aa5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 PCYOX1LQ8NBM8 494 aa5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 NLGN4YQ8NFZ3 816 aaPredicted RBP5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 OR56A3Q8NH54 315 aa5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 GCDHQ92947 438 aaPredicted RBP5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 PACSIN1Q9BY11 444 aa5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 SLAMF7Q9NQ25 335 aa5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 SRP68Q9UHB9 627 aaKnown RBP5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 HERC5Q9UII4 1024 aaKnown RBP5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 RUVBL1Q9Y265 456 aaKnown RBP5.31□□□□□ -1.56
NUDCD1-202ENST00000427660 DYTNA2CJ06 578 aa5.3□□□□□ -1.56
NUDCD1-202ENST00000427660 JUNP05412 331 aaKnown RBP5.3□□□□□ -1.56
NUDCD1-202ENST00000427660 IFIT1P09914 478 aaKnown RBP5.3□□□□□ -1.56
NUDCD1-202ENST00000427660 PFKLP17858 780 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms