RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 TADA2BQ86TJ2 420 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 C18orf8Q96DM3 657 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 FAM161BQ96MY7 647 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 RERGLQ9H628 205 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 XPO7Q9UIA9 1087 aaKnown RBP13.82□□□□□ -0.2
SPG11-202ENST00000427534 ARHGAP26Q9UNA1 814 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 RNF103-CHMP3A0A140T963 221 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 KPNA7A9QM74 516 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 RBP5P82980 135 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 SF3B3Q15393 1217 aaKnown RBP13.82□□□□□ -0.2
SPG11-202ENST00000427534 C6orf10Q5SRN2 563 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 CLEC17AQ6ZS10 378 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 GBA2Q9HCG7 927 aaPredicted RBP13.82□□□□□ -0.2
SPG11-202ENST00000427534 PTPRHQ9HD43 1115 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 PCMTD2Q9NV79 361 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 ITGB6P18564 788 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 MAP3K7CLP57077 242 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 ATP2C1P98194 919 aaPredicted RBP13.82□□□□□ -0.2
SPG11-202ENST00000427534 POM121L1PQ3SYA9 428 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 TJAP1Q5JTD0 557 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 C6orf118Q5T5N4 469 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 ITPRIPL1Q6GPH6 555 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 WDR75Q8IWA0 830 aaKnown RBP13.82□□□□□ -0.2
SPG11-202ENST00000427534 RBBP8NLQ8NC74 664 aaPredicted RBP13.82□□□□□ -0.2
SPG11-202ENST00000427534 FBXO41Q8TF61 875 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 POP1Q99575 1024 aaKnown RBP13.82□□□□□ -0.2
SPG11-202ENST00000427534 DDX50Q9BQ39 737 aaKnown RBP13.82□□□□□ -0.2
SPG11-202ENST00000427534 CIPCQ9C0C6 399 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 RAB6BQ9NRW1 208 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.82□□□□□ -0.2
SPG11-202ENST00000427534 DBR1Q9UK59 544 aaKnown RBP13.82□□□□□ -0.2
SPG11-202ENST00000427534 FBXL21Q9UKT6 434 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 CDV3Q9UKY7 258 aaKnown RBP13.82□□□□□ -0.2
SPG11-202ENST00000427534 PCDHGB4Q9UN71 923 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 CROCC2H7BZ55 1655 aa13.82□□□□□ -0.2
SPG11-202ENST00000427534 PMPCBO75439 489 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 ENO1P06733 434 aaKnown RBP13.81□□□□□ -0.2
SPG11-202ENST00000427534 MEI1Q5TIA1 1274 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 CEP70Q8NHQ1 597 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 TGS1Q96RS0 853 aaKnown RBP13.81□□□□□ -0.2
SPG11-202ENST00000427534 SELENONQ9NZV5 590 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 SETBP1Q9Y6X0 1596 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 PFDN1O60925 122 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 KDSRQ06136 332 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 DMC1Q14565 340 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 LONRF1Q17RB8 773 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 FUT11Q495W5 492 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 NBPF12Q5TAG4 269 aaPredicted RBP13.81□□□□□ -0.2
SPG11-202ENST00000427534 QRICH2Q9H0J4 1663 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 TTC26A0AVF1 554 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 HIST1H2AGP0C0S8 130 aaPredicted RBP13.81□□□□□ -0.2
SPG11-202ENST00000427534 HIST1H2ADP20671 130 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 ZNF543Q08ER8 600 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 ALFQ53S48 1182 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 CDKL3Q8IVW4 592 aaPredicted RBP13.81□□□□□ -0.2
SPG11-202ENST00000427534 SLC35G2Q8TBE7 412 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 BLOC1S5Q8TDH9 187 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 PTPRN2Q92932 1015 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 HIST1H2AHQ96KK5 128 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 HIST1H2AJQ99878 128 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 H2AFJQ9BTM1 129 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 TARS2Q9BW92 718 aaKnown RBP13.81□□□□□ -0.2
SPG11-202ENST00000427534 CNOT10Q9H9A5 744 aaKnown RBP13.81□□□□□ -0.2
SPG11-202ENST00000427534 NMRK2Q9NPI5 230 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 ARHGEF38Q9NXL2 777 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 ZNF212Q9UDV6 495 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 GTF2A1LQ9UNN4 478 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 DIS3Q9Y2L1 958 aaKnown RBP13.81□□□□□ -0.2
SPG11-202ENST00000427534 B3GAT3O94766 335 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 CAMTA2O94983 1202 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 EPHA7Q15375 998 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 ARHGAP15Q53QZ3 475 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 OSBPL9Q96SU4 736 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 hCG_2014768A0A024R1R8 64 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 C5orf58C9J3I9 102 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 CCDC188H7C350 402 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 KRT38O76015 456 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 TDRD10Q5VZ19 366 aaKnown RBP13.81□□□□□ -0.2
SPG11-202ENST00000427534 FOXR1Q6PIV2 292 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 SLC30A1Q9Y6M5 507 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 SYNGAP1Q96PV0 1343 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.81□□□□□ -0.2
SPG11-202ENST00000427534 SLC15A2Q16348 729 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 EMBQ6PCB8 327 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 FOPNLQ96NB1 174 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 GLIS2Q9BZE0 524 aaPredicted RBP13.81□□□□□ -0.2
SPG11-202ENST00000427534 BRD8Q9H0E9 1235 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 TRIM17Q9Y577 477 aa13.81□□□□□ -0.2
SPG11-202ENST00000427534 MCF2P10911 925 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 USP10Q14694 798 aaKnown RBP13.8□□□□□ -0.2
SPG11-202ENST00000427534 PLCL1Q15111 1095 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 IQSEC2Q5JU85 1478 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 SPATA31A1Q5TZJ5 1347 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 RHOT1Q8IXI2 618 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 PRMT1Q99873 361 aaKnown RBP13.8□□□□□ -0.2
SPG11-202ENST00000427534 BFARQ9NZS9 450 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 JCADQ9P266 1359 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 ZNF609O15014 1411 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 ESRRGP62508 458 aa13.8□□□□□ -0.2
SPG11-202ENST00000427534 GPAT2Q6NUI2 795 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms