RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 FKBP9O95302 570 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 LPLP06858 475 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 CENPBP07199 599 aaPredicted RBP3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 ID4P47928 161 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 THBS3P49746 956 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 SCNN1BP51168 640 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 MANFP55145 182 aaKnown RBP3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 PHC1P78364 1004 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 PPARAQ07869 468 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 CT83Q5H943 113 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 FKBP9P1Q75LS8 142 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 PASD1Q8IV76 773 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 ZNF610Q8N9Z0 462 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 PMM1Q92871 262 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 SLKQ9H2G2 1235 aaPredicted RBP3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 EMC7Q9NPA0 242 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 DDX56Q9NY93 547 aaKnown RBP3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 USP25Q9UHP3 1055 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 PRSS50Q9UI38 385 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 MTO1Q9Y2Z2 717 aaKnown RBP3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 CUX2O14529 1486 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 NCAPD3P42695 1498 aa3.21□□□□□ -1.9
R3HDM1-205ENST00000425804 ST20-MTHFSA0A0A6YYL1 179 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 LINC00473A8K010 186 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 WNT10BO00744 389 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 KDM1AO60341 852 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 TMEM127O75204 238 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 PTMSP20962 102 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 LSSP48449 732 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 TBX4P57082 545 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 CLRN1P58418 232 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 SART3Q15020 963 aaKnown RBP3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 PDCD1Q15116 288 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 LRRC41Q15345 812 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 GEN1Q17RS7 908 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 PITRM1Q5JRX3 1037 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 CEP78Q5JTW2 689 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 GPR158Q5T848 1215 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 RASAL3Q86YV0 1011 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 CMIPQ8IY22 773 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 PRPF38AQ8NAV1 312 aaKnown RBP3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 LEO1Q8WVC0 666 aaPredicted RBP3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 SLC5A5Q92911 643 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 MFSD3Q96ES6 412 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 CTAGE1Q96RT6 745 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 FEZ1Q99689 392 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 TMEM79Q9BSE2 394 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 TYW1Q9NV66 732 aaKnown RBP3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 GEMIN8Q9NWZ8 242 aaKnown RBP3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 GABBR1Q9UBS5 961 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 ST3GAL5Q9UNP4 418 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 NUMBLQ9Y6R0 609 aa3.2□□□□□ -1.9
R3HDM1-205ENST00000425804 PRDM2Q13029 1718 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 TRGV11A0A075B6L2 103 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 PJA2O43164 708 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 PRC1O43663 620 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 ERN1O75460 977 aaKnown RBP3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 TNFRSF1BP20333 461 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 LSP1P33241 339 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 NANOS2P60321 138 aaKnown RBP3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 ERV3-1Q14264 604 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 NBPF8Q3BBV2 869 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 FAM153CQ494X1 144 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 LONRF3Q496Y0 759 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 PXDC1Q5TGL8 231 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 VWA1Q6PCB0 445 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 LMBR1LQ6UX01 489 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 FRMD7Q6ZUT3 714 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 KIAA0907Q7Z7F0 614 aaPredicted RBP3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 PPM1KQ8N3J5 372 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 UBR7Q8N806 425 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 OR2W6PQ8NHA6 318 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 TMEM255BQ8WV15 326 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 JDP2Q8WYK2 163 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 FBXL20Q96IG2 436 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 HAPLN3Q96S86 360 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 TOPORSQ9NS56 1045 aaPredicted RBP3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 TERF2IPQ9NYB0 399 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 SERGEFQ9UGK8 458 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 G3BP2Q9UN86 482 aaKnown RBP3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 AFG3L2Q9Y4W6 797 aa3.19□□□□□ -1.9
R3HDM1-205ENST00000425804 ADCY6O43306 1168 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 SH3BP5O60239 455 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 PDE8AO60658 829 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 PRAMEF4O60810 478 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 PDGFRBP09619 1106 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 CYP2D6P10635 497 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 MYCLP1P12525 358 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 XPAP23025 273 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 FLT3LGP49771 235 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 LGALS4P56470 323 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 BIRC2Q13490 618 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 ATP13A4Q4VNC1 1196 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 C4orf46Q504U0 113 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 PRAMEF14Q5SWL7 426 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 FBXL22Q6P050 247 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 FOXR2Q6PJQ5 311 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 GSG1LQ6UXU4 331 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 TSHZ1Q6ZSZ6 1077 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms