RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 SLC39A4Q6P5W5 647 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 TMEM174Q8WUU8 243 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 ADAM33Q9BZ11 813 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 CDC42EP4Q9H3Q1 356 aaKnown RBP13.8□□□□□ -0.2
COL12A1-205ENST00000425443 CHST7Q9NS84 486 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 HOXC10Q9NYD6 342 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 MCM8Q9UJA3 840 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 GTF3C4Q9UKN8 822 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 BLOC1S6Q9UL45 172 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 ZNF214Q9UL59 606 aaPredicted RBP13.8□□□□□ -0.2
COL12A1-205ENST00000425443 C19orf81C9J6K1 198 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 PMM2O15305 246 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 MGRN1O60291 552 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 GJB6O95452 261 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 CDR1P51861 262 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 CALCOCO2Q13137 446 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 CYP1B1Q16678 543 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 SGO2Q562F6 1265 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 XKR3Q5GH77 459 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 HP1BP3Q5SSJ5 553 aaPredicted RBP13.8□□□□□ -0.2
COL12A1-205ENST00000425443 SPOPLQ6IQ16 392 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 MORC4Q8TE76 937 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 PSPC1Q8WXF1 523 aaKnown RBP13.8□□□□□ -0.2
COL12A1-205ENST00000425443 MRRFQ96E11 262 aaKnown RBP13.8□□□□□ -0.2
COL12A1-205ENST00000425443 MFSD14AQ96MC6 490 aa13.8□□□□□ -0.2
COL12A1-205ENST00000425443 NTPCRQ9BSD7 190 aaKnown RBP13.8□□□□□ -0.2
COL12A1-205ENST00000425443 K7ERI5 159 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 RASGRF2O14827 1237 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 DNAJC8O75937 253 aaPredicted RBP13.79□□□□□ -0.2
COL12A1-205ENST00000425443 CETPP11597 493 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 GARTP22102 1010 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 GTF2H1P32780 548 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 CLNS1AP54105 237 aaKnown RBP13.79□□□□□ -0.2
COL12A1-205ENST00000425443 CCDC15Q0P6D6 951 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 EMC2Q15006 297 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 STXBP2Q15833 593 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 WLSQ5T9L3 541 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 ACAD10Q6JQN1 1059 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 HIBCHQ6NVY1 386 aaPredicted RBP13.79□□□□□ -0.2
COL12A1-205ENST00000425443 CAPN12Q6ZSI9 719 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 SLC7A3Q8WY07 619 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 SENP7Q9BQF6 1050 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 KCNK9Q9NPC2 374 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 ZNF302Q9NR11 478 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 UVRAGQ9P2Y5 699 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 AGO2Q9UKV8 859 aaKnown RBP13.79□□□□□ -0.2
COL12A1-205ENST00000425443 ASAP2O43150 1006 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 RGS20O76081 388 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 AGTP01019 485 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 OAZ1P54368 228 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 TCEAL1Q15170 157 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 ACCSLQ4AC99 568 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 VSTM1Q6UX27 236 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 ARMC9Q7Z3E5 817 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 CYP4X1Q8N118 509 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 XPNPEP1Q9NQW7 623 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 COQ4Q9Y3A0 265 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 GRIN3BO60391 1043 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 RARGP13631 454 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 TPP2P29144 1249 aaPredicted RBP13.79□□□□□ -0.2
COL12A1-205ENST00000425443 NSFP46459 744 aaKnown RBP13.79□□□□□ -0.2
COL12A1-205ENST00000425443 KRT17Q04695 432 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 SEZ6Q53EL9 994 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 C6orf118Q5T5N4 469 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 GDAP1Q8TB36 358 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 TBC1D31Q96DN5 1066 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 TCHPQ9BT92 498 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 FGFR1OP2Q9NVK5 253 aa13.79□□□□□ -0.2
COL12A1-205ENST00000425443 PODXLO00592 558 aa13.78□□□□□ -0.2
COL12A1-205ENST00000425443 SUPT20HL2P0C7V6 817 aa13.78□□□□□ -0.2
COL12A1-205ENST00000425443 POTEJP0CG39 1038 aa13.78□□□□□ -0.2
COL12A1-205ENST00000425443 GHRP10912 638 aa13.78□□□□□ -0.2
COL12A1-205ENST00000425443 KCNJ2P63252 427 aa13.78□□□□□ -0.2
COL12A1-205ENST00000425443 NAA25Q14CX7 972 aa13.78□□□□□ -0.2
COL12A1-205ENST00000425443 SUPT20HL1Q3ZLR7 823 aa13.78□□□□□ -0.2
COL12A1-205ENST00000425443 ENOSF1Q7L5Y1 443 aa13.78□□□□□ -0.2
COL12A1-205ENST00000425443 TBC1D1Q86TI0 1168 aaPredicted RBP13.78□□□□□ -0.2
COL12A1-205ENST00000425443 APOBEC3FQ8IUX4 373 aaKnown RBP13.78□□□□□ -0.2
COL12A1-205ENST00000425443 KIAA1586Q9HCI6 787 aa13.78□□□□□ -0.2
COL12A1-205ENST00000425443 EXTL3O43909 919 aa13.78□□□□□ -0.2
COL12A1-205ENST00000425443 ATP6V1G2O95670 118 aa13.78□□□□□ -0.2
COL12A1-205ENST00000425443 CYP1A2P05177 515 aa13.78□□□□□ -0.2
COL12A1-205ENST00000425443 SETDB1Q15047 1291 aa13.78□□□□□ -0.2
COL12A1-205ENST00000425443 ABHD15Q6UXT9 468 aa13.78□□□□□ -0.2
COL12A1-205ENST00000425443 CATSPERGQ6ZRH7 1159 aa13.78□□□□□ -0.2
COL12A1-205ENST00000425443 DDX1Q92499 740 aaKnown RBP13.78□□□□□ -0.2
COL12A1-205ENST00000425443 GGA3Q9NZ52 723 aa13.78□□□□□ -0.2
COL12A1-205ENST00000425443 R3HDM2Q9Y2K5 976 aaKnown RBP13.78□□□□□ -0.2
COL12A1-205ENST00000425443 MTA2O94776 668 aa13.77□□□□□ -0.2
COL12A1-205ENST00000425443 GGPS1O95749 300 aa13.77□□□□□ -0.2
COL12A1-205ENST00000425443 OAS1P00973 400 aaKnown RBP13.77□□□□□ -0.2
COL12A1-205ENST00000425443 RRM1P23921 792 aa13.77□□□□□ -0.2
COL12A1-205ENST00000425443 IVDP26440 423 aa13.77□□□□□ -0.2
COL12A1-205ENST00000425443 BPIFB4P59827 614 aa13.77□□□□□ -0.2
COL12A1-205ENST00000425443 TRPM8Q7Z2W7 1104 aa13.77□□□□□ -0.2
COL12A1-205ENST00000425443 TCP11Q8WWU5 503 aa13.77□□□□□ -0.2
COL12A1-205ENST00000425443 FBXL18Q96ME1 805 aa13.77□□□□□ -0.2
COL12A1-205ENST00000425443 MSTO1Q9BUK6 570 aa13.77□□□□□ -0.2
COL12A1-205ENST00000425443 CCDC134Q9H6E4 229 aa13.77□□□□□ -0.2
COL12A1-205ENST00000425443 RBAKQ9NYW8 714 aaPredicted RBP13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms