RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 SLC2A13Q96QE2 648 aa6.5□□□□□ -1.37
LINC01040-201ENST00000425048 HAPLN3Q96S86 360 aa6.5□□□□□ -1.37
LINC01040-201ENST00000425048 SLKQ9H2G2 1235 aaPredicted RBP6.5□□□□□ -1.37
LINC01040-201ENST00000425048 CTTNBP2NLQ9P2B4 639 aa6.5□□□□□ -1.37
LINC01040-201ENST00000425048 CDYLQ9Y232 598 aa6.5□□□□□ -1.37
LINC01040-201ENST00000425048 KAT6AQ92794 2004 aa6.5□□□□□ -1.37
LINC01040-201ENST00000425048 GRM6O15303 877 aa6.49□□□□□ -1.37
LINC01040-201ENST00000425048 CHRM2P08172 466 aa6.49□□□□□ -1.37
LINC01040-201ENST00000425048 ANXA11P50995 505 aaKnown RBP6.49□□□□□ -1.37
LINC01040-201ENST00000425048 EZH2Q15910 746 aaKnown RBP6.49□□□□□ -1.37
LINC01040-201ENST00000425048 PABPC1LQ4VXU2 614 aaKnown RBP6.49□□□□□ -1.37
LINC01040-201ENST00000425048 LCE1AQ5T7P2 110 aa6.49□□□□□ -1.37
LINC01040-201ENST00000425048 AFAP1L2Q8N4X5 818 aa6.49□□□□□ -1.37
LINC01040-201ENST00000425048 DCBLD1Q8N8Z6 715 aa6.49□□□□□ -1.37
LINC01040-201ENST00000425048 NRG4Q8WWG1 115 aa6.49□□□□□ -1.37
LINC01040-201ENST00000425048 VSX1Q9NZR4 365 aaPredicted RBP6.49□□□□□ -1.37
LINC01040-201ENST00000425048 ST3GAL5Q9UNP4 418 aa6.49□□□□□ -1.37
LINC01040-201ENST00000425048 PRKD3O94806 890 aa6.48□□□□□ -1.37
LINC01040-201ENST00000425048 ITPKBP27987 946 aa6.48□□□□□ -1.37
LINC01040-201ENST00000425048 WASP42768 502 aa6.48□□□□□ -1.37
LINC01040-201ENST00000425048 NXPH1P58417 271 aa6.48□□□□□ -1.37
LINC01040-201ENST00000425048 TXNRD1Q16881 649 aa6.48□□□□□ -1.37
LINC01040-201ENST00000425048 PREPLQ4J6C6 727 aaPredicted RBP6.48□□□□□ -1.37
LINC01040-201ENST00000425048 AMIGO2Q86SJ2 522 aa6.48□□□□□ -1.37
LINC01040-201ENST00000425048 RSPH3Q86UC2 560 aa6.48□□□□□ -1.37
LINC01040-201ENST00000425048 PPM1NQ8N819 430 aa6.48□□□□□ -1.37
LINC01040-201ENST00000425048 C9orf106Q8NAJ2 232 aa6.48□□□□□ -1.37
LINC01040-201ENST00000425048 IL17RDQ8NFM7 739 aa6.48□□□□□ -1.37
LINC01040-201ENST00000425048 MYCBPAPQ8TBZ2 947 aa6.48□□□□□ -1.37
LINC01040-201ENST00000425048 SNX19Q92543 992 aa6.48□□□□□ -1.37
LINC01040-201ENST00000425048 FLRT1Q9NZU1 646 aa6.48□□□□□ -1.37
LINC01040-201ENST00000425048 CCDC195A0A1B0GUA6 201 aa6.47□□□□□ -1.37
LINC01040-201ENST00000425048 LINC00473A8K010 186 aa6.47□□□□□ -1.37
LINC01040-201ENST00000425048 GCOM1H8Y6P7 765 aaPredicted RBP6.47□□□□□ -1.37
LINC01040-201ENST00000425048 SUN1O94901 812 aa6.47□□□□□ -1.37
LINC01040-201ENST00000425048 EYA4O95677 639 aa6.47□□□□□ -1.37
LINC01040-201ENST00000425048 AGXTP21549 392 aa6.47□□□□□ -1.37
LINC01040-201ENST00000425048 ITIH3Q06033 890 aa6.47□□□□□ -1.37
LINC01040-201ENST00000425048 MAPK7Q13164 816 aa6.47□□□□□ -1.37
LINC01040-201ENST00000425048 HLXQ14774 488 aaPredicted RBP6.47□□□□□ -1.37
LINC01040-201ENST00000425048 NOP9Q86U38 636 aaKnown RBP6.47□□□□□ -1.37
LINC01040-201ENST00000425048 ADGRG5Q8IZF4 528 aa6.47□□□□□ -1.37
LINC01040-201ENST00000425048 ZNF277Q9NRM2 450 aaPredicted RBP6.47□□□□□ -1.37
LINC01040-201ENST00000425048 KLC4Q9NSK0 619 aa6.47□□□□□ -1.37
LINC01040-201ENST00000425048 TDP1Q9NUW8 608 aa6.47□□□□□ -1.37
LINC01040-201ENST00000425048 JKAMPQ9P055 326 aa6.47□□□□□ -1.37
LINC01040-201ENST00000425048 SAP30BPQ9UHR5 308 aaKnown RBP6.47□□□□□ -1.37
LINC01040-201ENST00000425048 ADAM21Q9UKJ8 722 aa6.47□□□□□ -1.37
LINC01040-201ENST00000425048 WASHC2AQ641Q2 1341 aa6.47□□□□□ -1.37
LINC01040-201ENST00000425048 TOR1BO14657 336 aa6.46□□□□□ -1.38
LINC01040-201ENST00000425048 SBK3P0C264 359 aa6.46□□□□□ -1.38
LINC01040-201ENST00000425048 PPP3CBP16298 524 aa6.46□□□□□ -1.38
LINC01040-201ENST00000425048 PIGFQ07326 219 aa6.46□□□□□ -1.38
LINC01040-201ENST00000425048 GRM1Q13255 1194 aa6.46□□□□□ -1.38
LINC01040-201ENST00000425048 LLGL1Q15334 1064 aa6.46□□□□□ -1.38
LINC01040-201ENST00000425048 RASAL3Q86YV0 1011 aa6.46□□□□□ -1.38
LINC01040-201ENST00000425048 CFAP52Q8N1V2 620 aa6.46□□□□□ -1.38
LINC01040-201ENST00000425048 PDPRQ8NCN5 879 aa6.46□□□□□ -1.38
LINC01040-201ENST00000425048 B3GALNT2Q8NCR0 500 aa6.46□□□□□ -1.38
LINC01040-201ENST00000425048 NSUN7Q8NE18 718 aaKnown RBP6.46□□□□□ -1.38
LINC01040-201ENST00000425048 SEMA6DQ8NFY4 1073 aa6.46□□□□□ -1.38
LINC01040-201ENST00000425048 WDR66Q8TBY9 1149 aa6.46□□□□□ -1.38
LINC01040-201ENST00000425048 TMX3Q96JJ7 454 aa6.46□□□□□ -1.38
LINC01040-201ENST00000425048 KLHL32Q96NJ5 620 aa6.46□□□□□ -1.38
LINC01040-201ENST00000425048 WDR27A2RRH5 827 aa6.45□□□□□ -1.38
LINC01040-201ENST00000425048 E7ENX8 843 aa6.45□□□□□ -1.38
LINC01040-201ENST00000425048 SLC43A1O75387 559 aa6.45□□□□□ -1.38
LINC01040-201ENST00000425048 MASP1P48740 699 aa6.45□□□□□ -1.38
LINC01040-201ENST00000425048 HNRNPMP52272 730 aaKnown RBP eCLIP6.45□□□□□ -1.38
LINC01040-201ENST00000425048 TAP2Q03519 686 aa6.45□□□□□ -1.38
LINC01040-201ENST00000425048 SLC10A2Q12908 348 aaPredicted RBP6.45□□□□□ -1.38
LINC01040-201ENST00000425048 TARDBPQ13148 414 aaKnown RBP eCLIP6.45□□□□□ -1.38
LINC01040-201ENST00000425048 AMOTL1Q8IY63 956 aa6.45□□□□□ -1.38
LINC01040-201ENST00000425048 AOPEPQ8N6M6 819 aa6.45□□□□□ -1.38
LINC01040-201ENST00000425048 PACSIN1Q9BY11 444 aa6.45□□□□□ -1.38
LINC01040-201ENST00000425048 IMPG2Q9BZV3 1241 aa6.45□□□□□ -1.38
LINC01040-201ENST00000425048 TBX22Q9Y458 520 aa6.45□□□□□ -1.38
LINC01040-201ENST00000425048 ZNF804BA4D1E1 1349 aa6.45□□□□□ -1.38
LINC01040-201ENST00000425048 IKBKBO14920 756 aa6.44□□□□□ -1.38
LINC01040-201ENST00000425048 GPR39O43194 453 aa6.44□□□□□ -1.38
LINC01040-201ENST00000425048 TTLL1O95922 423 aa6.44□□□□□ -1.38
LINC01040-201ENST00000425048 POU6F2P78424 691 aaPredicted RBP6.44□□□□□ -1.38
LINC01040-201ENST00000425048 CDC42EP1Q00587 391 aa6.44□□□□□ -1.38
LINC01040-201ENST00000425048 EIF2B5Q13144 721 aaKnown RBP6.44□□□□□ -1.38
LINC01040-201ENST00000425048 MTX3Q5HYI7 312 aa6.44□□□□□ -1.38
LINC01040-201ENST00000425048 LHFPL2Q6ZUX7 228 aa6.44□□□□□ -1.38
LINC01040-201ENST00000425048 MIGA2Q7L4E1 593 aa6.44□□□□□ -1.38
LINC01040-201ENST00000425048 SPATS2Q86XZ4 545 aaKnown RBP6.44□□□□□ -1.38
LINC01040-201ENST00000425048 VGLL2Q8N8G2 317 aa6.44□□□□□ -1.38
LINC01040-201ENST00000425048 SLC17A8Q8NDX2 589 aa6.44□□□□□ -1.38
LINC01040-201ENST00000425048 SSH1Q8WYL5 1049 aa6.44□□□□□ -1.38
LINC01040-201ENST00000425048 PADI4Q9UM07 663 aa6.44□□□□□ -1.38
LINC01040-201ENST00000425048 PCDHA13Q9Y5I0 950 aa6.44□□□□□ -1.38
LINC01040-201ENST00000425048 ERVK-21P61565 698 aa6.43□□□□□ -1.38
LINC01040-201ENST00000425048 SSBP2P81877 361 aaPredicted RBP6.43□□□□□ -1.38
LINC01040-201ENST00000425048 RNF219Q5W0B1 726 aaPredicted RBP6.43□□□□□ -1.38
LINC01040-201ENST00000425048 SUMO4Q6EEV6 95 aa6.43□□□□□ -1.38
LINC01040-201ENST00000425048 ZNF365Q70YC5 407 aa6.43□□□□□ -1.38
LINC01040-201ENST00000425048 TMPRSS9Q7Z410 1059 aa6.43□□□□□ -1.38
LINC01040-201ENST00000425048 IFI44Q8TCB0 444 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms