RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CDC16Q13042 620 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 RASA3Q14644 834 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 SEPT7Q16181 437 aaKnown RBP11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 GRIK5Q16478 980 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 CLEC4GQ6UXB4 293 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 NAT14Q8WUY8 206 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 MAML1Q92585 1016 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 NUP85Q9BW27 656 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 PCIF1Q9H4Z3 704 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 STX18Q9P2W9 335 aaKnown RBP11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 ASTN1O14525 1302 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 QSER1Q2KHR3 1735 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 ITGA2BP08514 1039 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 ANPEPP15144 967 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 DLG1Q12959 904 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 PPP2R5EQ16537 467 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 PCNX4Q63HM2 1172 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 MARK2Q7KZI7 788 aaKnown RBP11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 FRMD5Q7Z6J6 570 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 TRABD2AQ86V40 505 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 PPP1R14BQ96C90 147 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 HAUS1Q96CS2 278 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 SNF8Q96H20 258 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 ECSITQ9BQ95 431 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 BHMT2Q9H2M3 363 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 C10orf88Q9H8K7 445 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 ADGRA3Q8IWK6 1321 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 TAF1P21675 1872 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 SGPL1O95470 568 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 ASLP04424 464 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 ALAS1P13196 640 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 CDK7P50613 346 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 NCOA4Q13772 614 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 Q4G0T1 1027 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 ZFYVE27Q5T4F4 411 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 KAZNQ674X7 775 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 TTBK2Q6IQ55 1244 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 RIPOR1Q6ZS17 1223 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 RASSF3Q86WH2 238 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 FAM186BQ8IYM0 893 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 STKLD1Q8NE28 680 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 PRPF31Q8WWY3 499 aaKnown RBP11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 HSPBAP1Q96EW2 488 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 CEP95Q96GE4 821 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 AGPAT1Q99943 283 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 CENPKQ9BS16 269 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 NMUR2Q9GZQ4 415 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 PACSIN3Q9UKS6 424 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 COMMD3-BMI1R4GMX3 469 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 CNTNAP4Q9C0A0 1308 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 TMEM221A6NGB7 291 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 ADCY7P51828 1080 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 SNAP25P60880 206 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 GAD2Q05329 585 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 PDK4Q16654 411 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 IZUMO3Q5VZ72 239 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 DNAJC14Q6Y2X3 702 aaPredicted RBP11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 CYFIP1Q7L576 1253 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 CATSPER3Q86XQ3 398 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 SYT2Q8N9I0 419 aaPredicted RBP11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 NSL1Q96IY1 281 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 PANX3Q96QZ0 392 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 TMCC1O94876 653 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 MAGEA4P43358 317 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 FMO5P49326 533 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 PLOD1Q02809 727 aaPredicted RBP11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 SFT2D3Q587I9 215 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 C1orf146Q5VVC0 180 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 RHBDF2Q6PJF5 856 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 ZNF804AQ7Z570 1209 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 DZIP1Q86YF9 867 aaKnown RBP11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 ARHGEF19Q8IW93 802 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 GSTCDQ8NEC7 633 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 TMEM120AQ9BXJ8 343 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 STK33Q9BYT3 514 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 TBC1D30Q9Y2I9 924 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 NCANO14594 1321 aa11.93□□□□□ -0.5
SEC61A1-202ENST00000424880 A0A0J9YVX5 310 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 GSTA3Q16772 222 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 C12orf60Q5U649 245 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 FYB2Q5VWT5 728 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 SLC47A2Q86VL8 602 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 ZBED8Q8IZ13 594 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 ZSWIM2Q8NEG5 633 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 ZNF564Q8TBZ8 553 aaPredicted RBP11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 DENND1AQ8TEH3 1009 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 TTC17Q96AE7 1141 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 GPR101Q96P66 508 aaPredicted RBP11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 LRRC4BQ9NT99 713 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 BTAF1O14981 1849 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 GNPATO15228 680 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 MYL2P10916 166 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 ARFIP2P53365 341 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 AQP4P55087 323 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 GPC5P78333 572 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 SLC45A4Q5BKX6 768 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 RBM44Q6ZP01 1051 aaKnown RBP11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 RBM15BQ8NDT2 890 aaKnown RBP11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 TCP10LQ8TDR4 215 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms