RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 POSTNQ15063 836 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 GRAMD1BQ3KR37 738 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 HYIQ5T013 277 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 AKNAD1Q5T1N1 836 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 C1QL3Q5VWW1 255 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 NEK10Q6ZWH5 1172 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 ZNF771Q7L3S4 317 aaPredicted RBP3.24□□□□□ -1.89
PMS1-209ENST00000424059 RTL10Q7L3V2 364 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 TMEM110Q86TL2 294 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 RASSF3Q86WH2 238 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 C7orf31Q8N865 590 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.24□□□□□ -1.89
PMS1-209ENST00000424059 PRPF38AQ8NAV1 312 aaKnown RBP3.24□□□□□ -1.89
PMS1-209ENST00000424059 PPP1R14CQ8TAE6 165 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 HIST1H2AHQ96KK5 128 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 HIST1H2AJQ99878 128 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 TCHPQ9BT92 498 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 SLC46A2Q9BY10 475 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 ENKD1Q9H0I2 346 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 ZNF700Q9H0M5 742 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 PRKRIP1Q9H875 184 aaPredicted RBP3.24□□□□□ -1.89
PMS1-209ENST00000424059 PLEKHA5Q9HAU0 1116 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 PSD3Q9NYI0 1048 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 CPSF2Q9P2I0 782 aaKnown RBP3.24□□□□□ -1.89
PMS1-209ENST00000424059 FBXO2Q9UK22 296 aaPredicted RBP3.24□□□□□ -1.89
PMS1-209ENST00000424059 SPO11Q9Y5K1 396 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 ZBED9Q6R2W3 1325 aa3.24□□□□□ -1.89
PMS1-209ENST00000424059 TMEM94Q12767 1356 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 A6NCN8 305 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 TBKBP1A7MCY6 615 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 SMTNL1A8MU46 457 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 EIF3FO00303 357 aaPredicted RBP3.23□□□□□ -1.89
PMS1-209ENST00000424059 OPA1O60313 960 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 RPS6KA4O75676 772 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 ABHD16AO95870 558 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 UBA7P41226 1012 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 PKN2Q16513 984 aaKnown RBP3.23□□□□□ -1.89
PMS1-209ENST00000424059 ALFQ53S48 1182 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 PLEKHG4Q58EX7 1191 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 C10orf76Q5T2E6 689 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 ARMC4Q5T2S8 1044 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 TTC19Q6DKK2 380 aaPredicted RBP3.23□□□□□ -1.89
PMS1-209ENST00000424059 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 SPATS2Q86XZ4 545 aaKnown RBP3.23□□□□□ -1.89
PMS1-209ENST00000424059 SLC7A5P1Q8MH63 180 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 SYNPOQ8N3V7 929 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 TEX9Q8N6V9 391 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 GLB1L3Q8NCI6 653 aaPredicted RBP3.23□□□□□ -1.89
PMS1-209ENST00000424059 LILRB1Q8NHL6 650 aaPredicted RBP3.23□□□□□ -1.89
PMS1-209ENST00000424059 RSAD2Q8WXG1 361 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 RTF1Q92541 710 aaKnown RBP3.23□□□□□ -1.89
PMS1-209ENST00000424059 SNX21Q969T3 373 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 VOPP1Q96AW1 172 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 THOC1Q96FV9 657 aaKnown RBP3.23□□□□□ -1.89
PMS1-209ENST00000424059 CEP95Q96GE4 821 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 RSRC1Q96IZ7 334 aaKnown RBP3.23□□□□□ -1.89
PMS1-209ENST00000424059 LUZP4Q9P127 313 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 USP36Q9P275 1121 aaKnown RBP3.23□□□□□ -1.89
PMS1-209ENST00000424059 TAGLN3Q9UI15 199 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 DNAI1Q9UI46 699 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 PACSIN3Q9UKS6 424 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 HS3ST4Q9Y661 456 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 SPAG9O60271 1321 aaKnown RBP3.23□□□□□ -1.89
PMS1-209ENST00000424059 AKNAQ7Z591 1439 aa3.23□□□□□ -1.89
PMS1-209ENST00000424059 TSPAN6O43657 245 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 OPHN1O60890 802 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 B3GALNT1O75752 331 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 DNAJC8O75937 253 aaPredicted RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 BAG4O95429 457 aaKnown RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 FGFR1OPO95684 399 aaKnown RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 CYP1A2P05177 515 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 KRT18P05783 430 aaKnown RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 CYP11B2P19099 503 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 PROZP22891 400 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 CD40P25942 277 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 GPR15P49685 360 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 LRRC32Q14392 662 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 RASA2Q15283 850 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 LRRC41Q15345 812 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 CLPPQ16740 277 aaPredicted RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 GPR158Q5T848 1215 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 CCDC80Q76M96 950 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 DOK3Q7L591 496 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 PASD1Q8IV76 773 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 DCLK2Q8N568 766 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 PPHLN1Q8NEY8 458 aaKnown RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 PROKR1Q8TCW9 393 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 IPCEF1Q8WWN9 437 aaPredicted RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 FAXDC2Q96IV6 333 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 SH3GL3Q99963 347 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 CRACR2AQ9BSW2 395 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 TCF7L2Q9NQB0 619 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 KCTD5Q9NXV2 234 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 MAGEL2Q9UJ55 1249 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 NOSIPQ9Y314 301 aaKnown RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 LRRFIP2Q9Y608 721 aaKnown RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 V9GYY5 206 aaPredicted RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 RASA4BC9J798 803 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms