RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 RC3H2Q9HBD1 1191 aaKnown RBP17.12■□□□□ 0.33
ABCA1-203ENST00000423487 NXF1Q9UBU9 619 aaKnown RBP17.12■□□□□ 0.33
ABCA1-203ENST00000423487 KPNA7A9QM74 516 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 AKR1B15C9JRZ8 316 aaPredicted RBP17.11■□□□□ 0.33
ABCA1-203ENST00000423487 OR1G1P47890 313 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 FXR1P51114 621 aaKnown RBP eCLIP17.11■□□□□ 0.33
ABCA1-203ENST00000423487 GSDMDP57764 484 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 LILRA4P59901 499 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 TNNC1P63316 161 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 CUL2Q13617 745 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 BTG3Q14201 252 aaPredicted RBP17.11■□□□□ 0.33
ABCA1-203ENST00000423487 RASIP1Q5U651 963 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 TMCO2Q7Z6W1 182 aaPredicted RBP17.11■□□□□ 0.33
ABCA1-203ENST00000423487 JAKMIP2Q96AA8 810 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 PAAF1Q9BRP4 392 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 ZBED2Q9BTP6 218 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 NUCKS1Q9H1E3 243 aaKnown RBP17.11■□□□□ 0.33
ABCA1-203ENST00000423487 MYO6Q9UM54 1294 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 B4GALT3O60512 393 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 MFAP3LO75121 409 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 B3GAT3O94766 335 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 ALDH2P05091 517 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 ATP2A2P16615 1042 aaKnown RBP17.11■□□□□ 0.33
ABCA1-203ENST00000423487 KRT9P35527 623 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 ARHGAP44Q17R89 818 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 SMYD5Q6GMV2 418 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 HERC6Q8IVU3 1022 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 BAP1Q92560 729 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 CYP3A43Q9HB55 503 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 GDAP2Q9NXN4 497 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 CACNG4Q9UBN1 327 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 DNAJB4Q9UDY4 337 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 INSL6Q9Y581 213 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 SNX9Q9Y5X1 595 aa17.11■□□□□ 0.33
ABCA1-203ENST00000423487 CARNS1A5YM72 827 aa17.1■□□□□ 0.33
ABCA1-203ENST00000423487 TMEM189-UBE2V1I3L0A0 370 aa17.1■□□□□ 0.33
ABCA1-203ENST00000423487 RNF225M0QZC1 329 aaPredicted RBP17.1■□□□□ 0.33
ABCA1-203ENST00000423487 SPTLC1O15269 473 aa17.1■□□□□ 0.33
ABCA1-203ENST00000423487 PTMAP06454 111 aaKnown RBP17.1■□□□□ 0.33
ABCA1-203ENST00000423487 ASPAP45381 313 aa17.1■□□□□ 0.33
ABCA1-203ENST00000423487 YWHAEP62258 255 aaKnown RBP17.1■□□□□ 0.33
ABCA1-203ENST00000423487 HTRA4P83105 476 aaPredicted RBP17.1■□□□□ 0.33
ABCA1-203ENST00000423487 DRAP1Q14919 205 aaPredicted RBP17.1■□□□□ 0.33
ABCA1-203ENST00000423487 TSR1Q2NL82 804 aaKnown RBP17.1■□□□□ 0.33
ABCA1-203ENST00000423487 PDXDC1Q6P996 788 aa17.1■□□□□ 0.33
ABCA1-203ENST00000423487 CCDC186Q7Z3E2 898 aa17.1■□□□□ 0.33
ABCA1-203ENST00000423487 FMNL3Q8IVF7 1028 aa17.1■□□□□ 0.33
ABCA1-203ENST00000423487 RABGGTAQ92696 567 aa17.1■□□□□ 0.33
ABCA1-203ENST00000423487 KAT5Q92993 513 aa17.1■□□□□ 0.33
ABCA1-203ENST00000423487 KREMEN1Q96MU8 473 aa17.1■□□□□ 0.33
ABCA1-203ENST00000423487 MMS19Q96T76 1030 aa17.1■□□□□ 0.33
ABCA1-203ENST00000423487 COLEC11Q9BWP8 271 aa17.1■□□□□ 0.33
ABCA1-203ENST00000423487 BCO2Q9BYV7 579 aa17.1■□□□□ 0.33
ABCA1-203ENST00000423487 FAM124BQ9H5Z6 455 aaPredicted RBP17.1■□□□□ 0.33
ABCA1-203ENST00000423487 AJAP1Q9UKB5 411 aaPredicted RBP17.1■□□□□ 0.33
ABCA1-203ENST00000423487 POLIQ9UNA4 740 aa17.1■□□□□ 0.33
ABCA1-203ENST00000423487 FAN1Q9Y2M0 1017 aa17.1■□□□□ 0.33
ABCA1-203ENST00000423487 TDRD15B5MCY1 1934 aaKnown RBP17.09■□□□□ 0.33
ABCA1-203ENST00000423487 NRP1O14786 923 aa17.09■□□□□ 0.33
ABCA1-203ENST00000423487 HUS1O60921 280 aa17.09■□□□□ 0.33
ABCA1-203ENST00000423487 STAT1P42224 750 aa17.09■□□□□ 0.33
ABCA1-203ENST00000423487 AARSP49588 968 aaKnown RBP eCLIP17.09■□□□□ 0.33
ABCA1-203ENST00000423487 RGS19P49795 217 aa17.09■□□□□ 0.33
ABCA1-203ENST00000423487 ADKP55263 362 aaKnown RBP17.09■□□□□ 0.33
ABCA1-203ENST00000423487 JAM2P57087 298 aa17.09■□□□□ 0.33
ABCA1-203ENST00000423487 C9orf50Q5SZB4 431 aa17.09■□□□□ 0.33
ABCA1-203ENST00000423487 SPOUT1Q5T280 376 aaKnown RBP17.09■□□□□ 0.33
ABCA1-203ENST00000423487 DSTYKQ6XUX3 929 aa17.09■□□□□ 0.33
ABCA1-203ENST00000423487 TTC39CQ8N584 583 aa17.09■□□□□ 0.33
ABCA1-203ENST00000423487 C3orf58Q8NDZ4 430 aa17.09■□□□□ 0.33
ABCA1-203ENST00000423487 OR8K1Q8NGG5 319 aa17.09■□□□□ 0.33
ABCA1-203ENST00000423487 SHC3Q92529 594 aa17.09■□□□□ 0.33
ABCA1-203ENST00000423487 RNPC3Q96LT9 517 aaKnown RBP17.09■□□□□ 0.33
ABCA1-203ENST00000423487 RAD9AQ99638 391 aa17.09■□□□□ 0.33
ABCA1-203ENST00000423487 CWH43Q9H720 699 aa17.09■□□□□ 0.33
ABCA1-203ENST00000423487 PRG3Q9Y2Y8 225 aaPredicted RBP17.09■□□□□ 0.33
ABCA1-203ENST00000423487 ARHGEF37A1IGU5 675 aa17.08■□□□□ 0.32
ABCA1-203ENST00000423487 LRRC53A6NM62 1247 aa17.08■□□□□ 0.32
ABCA1-203ENST00000423487 F8VZ95 297 aa17.08■□□□□ 0.32
ABCA1-203ENST00000423487 KIF4AO95239 1232 aa17.08■□□□□ 0.32
ABCA1-203ENST00000423487 GALTP07902 379 aa17.08■□□□□ 0.32
ABCA1-203ENST00000423487 SLC11A1P49279 550 aa17.08■□□□□ 0.32
ABCA1-203ENST00000423487 ALDH7A1P49419 539 aaKnown RBP17.08■□□□□ 0.32
ABCA1-203ENST00000423487 SCARA5Q6ZMJ2 495 aa17.08■□□□□ 0.32
ABCA1-203ENST00000423487 DPH6Q7L8W6 267 aa17.08■□□□□ 0.32
ABCA1-203ENST00000423487 TOP6BLQ8N6T0 577 aa17.08■□□□□ 0.32
ABCA1-203ENST00000423487 TC2NQ8N9U0 490 aa17.08■□□□□ 0.32
ABCA1-203ENST00000423487 DNAJC7Q99615 494 aa17.08■□□□□ 0.32
ABCA1-203ENST00000423487 ARID3AQ99856 593 aa17.08■□□□□ 0.32
ABCA1-203ENST00000423487 GDF15Q99988 308 aa17.08■□□□□ 0.32
ABCA1-203ENST00000423487 UBE2OQ9C0C9 1292 aaKnown RBP17.08■□□□□ 0.32
ABCA1-203ENST00000423487 HCSTQ9UBK5 93 aa17.08■□□□□ 0.32
ABCA1-203ENST00000423487 FNDC1Q4ZHG4 1894 aaPredicted RBP17.07■□□□□ 0.32
ABCA1-203ENST00000423487 H0YGN5 161 aa17.07■□□□□ 0.32
ABCA1-203ENST00000423487 FOXN3O00409 490 aaPredicted RBP17.07■□□□□ 0.32
ABCA1-203ENST00000423487 CYB561D2O14569 222 aa17.07■□□□□ 0.32
ABCA1-203ENST00000423487 TRAPPC3O43617 180 aa17.07■□□□□ 0.32
ABCA1-203ENST00000423487 TLL1O43897 1013 aa17.07■□□□□ 0.32
ABCA1-203ENST00000423487 TADA2AO75478 443 aa17.07■□□□□ 0.32
ABCA1-203ENST00000423487 WEE2P0C1S8 567 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms