RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 OR1D2P34982 312 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 LILRA4P59901 499 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 ITIH3Q06033 890 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 PPP2R3AQ06190 1150 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 DPYDQ12882 1025 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 ELAVL2Q12926 359 aaKnown RBP10.74□□□□□ -0.69
NF1-203ENST00000422121 RAB33AQ14088 237 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 POSTNQ15063 836 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 PSMD5Q16401 504 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 VARS2Q5ST30 1063 aaKnown RBP10.74□□□□□ -0.69
NF1-203ENST00000422121 C9orf57Q5W0N0 161 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 GPR149Q86SP6 731 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 CBWD2Q8IUF1 395 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 BRSK2Q8IWQ3 736 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 SYCP3Q8IZU3 236 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 FMR1NBQ8N0W7 255 aaPredicted RBP10.74□□□□□ -0.69
NF1-203ENST00000422121 TSPAN18Q96SJ8 248 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 PHF7Q9BWX1 381 aaPredicted RBP10.74□□□□□ -0.69
NF1-203ENST00000422121 ASB7Q9H672 318 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 TMEM206Q9H813 350 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 C11orf16Q9NQ32 467 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.74□□□□□ -0.69
NF1-203ENST00000422121 AGPAT3Q9NRZ7 376 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 DZANK1Q9NVP4 752 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 MTRRQ9UBK8 725 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 USP25Q9UHP3 1055 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 DERAQ9Y315 318 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 C2CD2Q9Y426 696 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 BACE2Q9Y5Z0 518 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 PTPRJQ12913 1337 aa10.74□□□□□ -0.69
NF1-203ENST00000422121 CCDC195A0A1B0GUA6 201 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 EXTL3O43909 919 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 ABLIM3O94929 683 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 GLUD1P00367 558 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 SRGAP2BP0DMP2 458 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 SLC8B1Q6J4K2 584 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 NELFCDQ8IXH7 590 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 CEP57L1Q8IYX8 460 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 KREMEN2Q8NCW0 462 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 CMASQ8NFW8 434 aaPredicted RBP10.73□□□□□ -0.69
NF1-203ENST00000422121 PLEKHO2Q8TD55 490 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 HDAC7Q8WUI4 952 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 PYM1Q9BRP8 204 aaKnown RBP10.73□□□□□ -0.69
NF1-203ENST00000422121 KCTD10Q9H3F6 313 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 SFXN1Q9H9B4 322 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 PDE11AQ9HCR9 933 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 NPDC1Q9NQX5 325 aaPredicted RBP10.73□□□□□ -0.69
NF1-203ENST00000422121 HSPBP1Q9NZL4 362 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 FBXW11Q9UKB1 542 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 FAM50BQ9Y247 325 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 TIMM13Q9Y5L4 95 aaPredicted RBP10.73□□□□□ -0.69
NF1-203ENST00000422121 CDY1Q9Y6F8 540 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 DMDP11532 3685 aa10.73□□□□□ -0.69
NF1-203ENST00000422121 MTCL1Q9Y4B5 1905 aaKnown RBP10.72□□□□□ -0.69
NF1-203ENST00000422121 SCN1AP35498 2009 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 DOCK6Q96HP0 2047 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 WDR27A2RRH5 827 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 PI4K2BG5E9Z4 385 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 SYN3O14994 580 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 CLIC2O15247 247 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 TRAPPC3O43617 180 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 N4BP1O75113 896 aaKnown RBP10.72□□□□□ -0.69
NF1-203ENST00000422121 GADD45BO75293 160 aaPredicted RBP10.72□□□□□ -0.69
NF1-203ENST00000422121 OAZ2O95190 189 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 SEC24AO95486 1093 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 RPN1P04843 607 aaKnown RBP10.72□□□□□ -0.69
NF1-203ENST00000422121 ROR1Q01973 937 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 TMEM132DQ14C87 1099 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 ATAT1Q5SQI0 421 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 C15orf39Q6ZRI6 1047 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 RNF135Q8IUD6 432 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 C12orf56Q8IXR9 622 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 GPD1LQ8N335 351 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 C1orf127Q8N9H9 656 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 TMEM87AQ8NBN3 555 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 OR5B17Q8NGF7 314 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 RPGRIP1Q96KN7 1286 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 RHOBTB2Q9BYZ6 727 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 PLEKHA4Q9H4M7 779 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 DMAC2Q9NW81 257 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 DPP3Q9NY33 737 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 SIX4Q9UIU6 781 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 FBXL5Q9UKA1 691 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 NUB1Q9Y5A7 615 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 C2orf16Q68DN1 1984 aa10.72□□□□□ -0.69
NF1-203ENST00000422121 C2CD4DB7Z1M9 353 aa10.71□□□□□ -0.69
NF1-203ENST00000422121 RHOBTB3O94955 611 aa10.71□□□□□ -0.69
NF1-203ENST00000422121 UBE4BO95155 1302 aa10.71□□□□□ -0.69
NF1-203ENST00000422121 LDHAP00338 332 aaKnown RBP10.71□□□□□ -0.69
NF1-203ENST00000422121 MYL1P05976 194 aa10.71□□□□□ -0.69
NF1-203ENST00000422121 SSTR3P32745 418 aaPredicted RBP10.71□□□□□ -0.69
NF1-203ENST00000422121 MCM4P33991 863 aa10.71□□□□□ -0.69
NF1-203ENST00000422121 CREMQ03060 361 aa10.71□□□□□ -0.69
NF1-203ENST00000422121 PSMD2Q13200 908 aa10.71□□□□□ -0.69
NF1-203ENST00000422121 KNOP1Q1ED39 458 aaKnown RBP10.71□□□□□ -0.69
NF1-203ENST00000422121 LMBRD2Q68DH5 695 aaPredicted RBP10.71□□□□□ -0.69
NF1-203ENST00000422121 ARMCX5Q6P1M9 558 aa10.71□□□□□ -0.69
NF1-203ENST00000422121 ANKS3Q6ZW76 656 aa10.71□□□□□ -0.69
NF1-203ENST00000422121 BEST2Q8NFU1 509 aa10.71□□□□□ -0.69
NF1-203ENST00000422121 ZNF461Q8TAF7 563 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms