RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 PACSIN1Q9BY11 444 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 TCF7L1Q9HCS4 588 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 MAN1C1Q9NR34 630 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 RLIMQ9NVW2 624 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 KCTD5Q9NXV2 234 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 TESQ9UGI8 421 aaKnown RBP5.33□□□□□ -1.56
LINC00397-201ENST00000422074 COX11Q9Y6N1 276 aa5.33□□□□□ -1.56
LINC00397-201ENST00000422074 E7ENX8 843 aa5.32□□□□□ -1.56
LINC00397-201ENST00000422074 F2RL2O00254 374 aa5.32□□□□□ -1.56
LINC00397-201ENST00000422074 SLC16A6O15403 523 aa5.32□□□□□ -1.56
LINC00397-201ENST00000422074 CYP2C19P33261 490 aa5.32□□□□□ -1.56
LINC00397-201ENST00000422074 TAP2Q03519 686 aa5.32□□□□□ -1.56
LINC00397-201ENST00000422074 GEN1Q17RS7 908 aa5.32□□□□□ -1.56
LINC00397-201ENST00000422074 UAP1L1Q3KQV9 507 aa5.32□□□□□ -1.56
LINC00397-201ENST00000422074 KHDC1Q4VXA5 237 aaKnown RBP5.32□□□□□ -1.56
LINC00397-201ENST00000422074 BRDTQ58F21 947 aaPredicted RBP5.32□□□□□ -1.56
LINC00397-201ENST00000422074 ADGRG3Q86Y34 549 aa5.32□□□□□ -1.56
LINC00397-201ENST00000422074 SLC44A3Q8N4M1 653 aa5.32□□□□□ -1.56
LINC00397-201ENST00000422074 PTCD3Q96EY7 689 aaKnown RBP5.32□□□□□ -1.56
LINC00397-201ENST00000422074 AIFM2Q9BRQ8 373 aa5.32□□□□□ -1.56
LINC00397-201ENST00000422074 CASS4Q9NQ75 786 aa5.32□□□□□ -1.56
LINC00397-201ENST00000422074 HOMER2Q9NSB8 354 aa5.32□□□□□ -1.56
LINC00397-201ENST00000422074 DMTF1Q9Y222 760 aa5.32□□□□□ -1.56
LINC00397-201ENST00000422074 POLHQ9Y253 713 aa5.32□□□□□ -1.56
LINC00397-201ENST00000422074 INSL6Q9Y581 213 aa5.32□□□□□ -1.56
LINC00397-201ENST00000422074 ARIH2O95376 493 aa5.31□□□□□ -1.56
LINC00397-201ENST00000422074 FTH1P19P0C7X4 201 aa5.31□□□□□ -1.56
LINC00397-201ENST00000422074 PDCP20941 246 aa5.31□□□□□ -1.56
LINC00397-201ENST00000422074 CCND1P24385 295 aa5.31□□□□□ -1.56
LINC00397-201ENST00000422074 CXCR5P32302 372 aa5.31□□□□□ -1.56
LINC00397-201ENST00000422074 RPS7P62081 194 aaKnown RBP5.31□□□□□ -1.56
LINC00397-201ENST00000422074 SIM1P81133 766 aaPredicted RBP5.31□□□□□ -1.56
LINC00397-201ENST00000422074 ZNF844Q08AG5 666 aa5.31□□□□□ -1.56
LINC00397-201ENST00000422074 STRIP1Q5VSL9 837 aa5.31□□□□□ -1.56
LINC00397-201ENST00000422074 VWA1Q6PCB0 445 aa5.31□□□□□ -1.56
LINC00397-201ENST00000422074 CLNKQ7Z7G1 428 aa5.31□□□□□ -1.56
LINC00397-201ENST00000422074 CFAP52Q8N1V2 620 aa5.31□□□□□ -1.56
LINC00397-201ENST00000422074 MIER2Q8N344 545 aa5.31□□□□□ -1.56
LINC00397-201ENST00000422074 TMIEQ8NEW7 156 aa5.31□□□□□ -1.56
LINC00397-201ENST00000422074 SSH3Q8TE77 659 aa5.31□□□□□ -1.56
LINC00397-201ENST00000422074 NTN5Q8WTR8 489 aaPredicted RBP5.31□□□□□ -1.56
LINC00397-201ENST00000422074 SCAMP4Q969E2 229 aa5.31□□□□□ -1.56
LINC00397-201ENST00000422074 LRIG1Q96JA1 1093 aa5.31□□□□□ -1.56
LINC00397-201ENST00000422074 INTS13Q9NVM9 706 aa5.31□□□□□ -1.56
LINC00397-201ENST00000422074 SLC45A2Q9UMX9 530 aa5.31□□□□□ -1.56
LINC00397-201ENST00000422074 TRGV11A0A075B6L2 103 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 PRSS29PA6NIE9 313 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 SUN1O94901 812 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 SNUPNO95149 360 aaKnown RBP5.3□□□□□ -1.56
LINC00397-201ENST00000422074 POU2F2P09086 479 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 FOLR3P41439 243 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 ANXA11P50995 505 aaKnown RBP5.3□□□□□ -1.56
LINC00397-201ENST00000422074 EXOSC10Q01780 885 aaKnown RBP5.3□□□□□ -1.56
LINC00397-201ENST00000422074 TCF15Q12870 199 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 DYRK1AQ13627 763 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 HLXQ14774 488 aaPredicted RBP5.3□□□□□ -1.56
LINC00397-201ENST00000422074 ZNF362Q5T0B9 420 aaPredicted RBP5.3□□□□□ -1.56
LINC00397-201ENST00000422074 THEMIS2Q5TEJ8 643 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 DPY19L2P1Q6NXN4 242 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 SLC4A10Q6U841 1118 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.3□□□□□ -1.56
LINC00397-201ENST00000422074 CPA6Q8N4T0 437 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 AOPEPQ8N6M6 819 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 C3orf20Q8ND61 904 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 CAGE1Q8TC20 777 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 POC1BQ8TC44 478 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 CHMP4CQ96CF2 233 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 ZNF764Q96H86 408 aaPredicted RBP5.3□□□□□ -1.56
LINC00397-201ENST00000422074 GPATCH3Q96I76 525 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 VRK1Q99986 396 aaPredicted RBP5.3□□□□□ -1.56
LINC00397-201ENST00000422074 GPR35Q9HC97 309 aa5.3□□□□□ -1.56
LINC00397-201ENST00000422074 NOP58Q9Y2X3 529 aaKnown RBP5.3□□□□□ -1.56
LINC00397-201ENST00000422074 ARHGEF17Q96PE2 2063 aaPredicted RBP5.3□□□□□ -1.56
LINC00397-201ENST00000422074 SPATA31A3Q5VYP0 1347 aa5.29□□□□□ -1.56
LINC00397-201ENST00000422074 CCDC195A0A1B0GUA6 201 aa5.29□□□□□ -1.56
LINC00397-201ENST00000422074 E9PLN8 166 aa5.29□□□□□ -1.56
LINC00397-201ENST00000422074 MPPED1O15442 326 aa5.29□□□□□ -1.56
LINC00397-201ENST00000422074 LPOP22079 712 aaPredicted RBP5.29□□□□□ -1.56
LINC00397-201ENST00000422074 GATA3P23771 443 aa5.29□□□□□ -1.56
LINC00397-201ENST00000422074 PLA2G5P39877 138 aa5.29□□□□□ -1.56
LINC00397-201ENST00000422074 HK3P52790 923 aa5.29□□□□□ -1.56
LINC00397-201ENST00000422074 PIGFQ07326 219 aa5.29□□□□□ -1.56
LINC00397-201ENST00000422074 CCDC93Q567U6 631 aa5.29□□□□□ -1.56
LINC00397-201ENST00000422074 USP45Q70EL2 814 aa5.29□□□□□ -1.56
LINC00397-201ENST00000422074 FAM90A1Q86YD7 464 aa5.29□□□□□ -1.56
LINC00397-201ENST00000422074 PDPRQ8NCN5 879 aa5.29□□□□□ -1.56
LINC00397-201ENST00000422074 NUP88Q99567 741 aaPredicted RBP5.29□□□□□ -1.56
LINC00397-201ENST00000422074 VKORC1Q9BQB6 163 aa5.29□□□□□ -1.56
LINC00397-201ENST00000422074 R3HDMLQ9H3Y0 253 aa5.29□□□□□ -1.56
LINC00397-201ENST00000422074 TYW1Q9NV66 732 aaKnown RBP5.29□□□□□ -1.56
LINC00397-201ENST00000422074 GNL3LQ9NVN8 582 aaKnown RBP5.29□□□□□ -1.56
LINC00397-201ENST00000422074 CDYLQ9Y232 598 aa5.29□□□□□ -1.56
LINC00397-201ENST00000422074 CHEK2O96017 543 aa5.28□□□□□ -1.56
LINC00397-201ENST00000422074 AKAP5P24588 427 aa5.28□□□□□ -1.56
LINC00397-201ENST00000422074 PRDX5P30044 214 aa5.28□□□□□ -1.56
LINC00397-201ENST00000422074 CACNA2D1P54289 1103 aa5.28□□□□□ -1.56
LINC00397-201ENST00000422074 ELLP55199 621 aaPredicted RBP5.28□□□□□ -1.56
LINC00397-201ENST00000422074 MRPS35P82673 323 aaKnown RBP5.28□□□□□ -1.56
LINC00397-201ENST00000422074 SF3B3Q15393 1217 aaKnown RBP5.28□□□□□ -1.56
LINC00397-201ENST00000422074 MICALCLQ6ZW33 695 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms