RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 SETD3Q86TU7 594 aaPredicted RBP12.94□□□□□ -0.34
CLCN4-203ENST00000421085 PACS2Q86VP3 889 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 SCUBE1Q8IWY4 988 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 THEM5Q8N1Q8 247 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 ZNF668Q96K58 619 aaPredicted RBP12.94□□□□□ -0.34
CLCN4-203ENST00000421085 FAM111AQ96PZ2 611 aa12.94□□□□□ -0.34
CLCN4-203ENST00000421085 MRPL4Q9BYD3 311 aaKnown RBP12.94□□□□□ -0.34
CLCN4-203ENST00000421085 LMTK3Q96Q04 1460 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 SPAG6O75602 509 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 MOCS2O96007 188 aaPredicted RBP12.93□□□□□ -0.34
CLCN4-203ENST00000421085 PSMC5P62195 406 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 RC3H1Q5TC82 1133 aaKnown RBP12.93□□□□□ -0.34
CLCN4-203ENST00000421085 MROH9Q5TGP6 573 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 PLEKHM3Q6ZWE6 761 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 PODNQ7Z5L7 613 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 TRIM45Q9H8W5 580 aaPredicted RBP12.93□□□□□ -0.34
CLCN4-203ENST00000421085 TMEM161AQ9NX61 479 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 DUSP10Q9Y6W6 482 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 HNRNPRO43390 633 aaKnown RBP12.93□□□□□ -0.34
CLCN4-203ENST00000421085 TLR2O60603 784 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 MYBP10242 640 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 AKR1B1P15121 316 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 CENPCQ03188 943 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 PTK2BQ14289 1009 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 DUOXA2Q1HG44 320 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 SPDYAQ5MJ70 313 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 REEP2Q9BRK0 252 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 BBS2Q9BXC9 721 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 STRNO43815 780 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 UBOX5O94941 541 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 PSMC3P17980 439 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 ENGASEQ8NFI3 743 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 TPCN2Q8NHX9 752 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 FAM167AQ96KS9 214 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 CHORDC1Q9UHD1 332 aaPredicted RBP12.93□□□□□ -0.34
CLCN4-203ENST00000421085 A8MXQ7 604 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 NBPF26B4DH59 902 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 FKBP9O95302 570 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 GRAPQ13588 217 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 FKBP9P1Q75LS8 142 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 HORMAD1Q86X24 394 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 CCDC60Q8IWA6 550 aaPredicted RBP12.93□□□□□ -0.34
CLCN4-203ENST00000421085 NBPF15Q8N660 670 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 GRAPLQ8TC17 118 aaPredicted RBP12.93□□□□□ -0.34
CLCN4-203ENST00000421085 PTPRN2Q92932 1015 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 FAM129AQ9BZQ8 928 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 ZNF556Q9HAH1 456 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 PALLDQ8WX93 1383 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 KRT16P08779 473 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 PIGHQ14442 188 aaPredicted RBP12.93□□□□□ -0.34
CLCN4-203ENST00000421085 CCDC142Q17RM4 750 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 SYNE4Q8N205 404 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 WNK4Q96J92 1243 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 ZCWPW1Q9H0M4 648 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 ANKZF1Q9H8Y5 726 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 SLAIN2Q9P270 581 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 FAM153AQ9UHL3 310 aa12.93□□□□□ -0.34
CLCN4-203ENST00000421085 METP08581 1390 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 FAM196BA6NMK8 535 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 SCARF1Q14162 830 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 STXBP2Q15833 593 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 AASDHQ4L235 1098 aaPredicted RBP12.92□□□□□ -0.34
CLCN4-203ENST00000421085 IZUMO2Q6UXV1 221 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 IGDCC4Q8TDY8 1250 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
CLCN4-203ENST00000421085 C17orf80Q9BSJ5 609 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 O00370 1275 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 ZNF609O15014 1411 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 USP1O94782 785 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 SPRP35270 261 aaPredicted RBP12.92□□□□□ -0.34
CLCN4-203ENST00000421085 DDX20Q9UHI6 824 aaKnown RBP12.92□□□□□ -0.34
CLCN4-203ENST00000421085 CLPTM1O96005 669 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 MAPK7Q13164 816 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 ADRM1Q16186 407 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 SH3GL1Q99961 368 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 C3orf70A6NLC5 250 aaPredicted RBP12.92□□□□□ -0.34
CLCN4-203ENST00000421085 TPST1O60507 370 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 AP3M2P53677 418 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 CACNA2D1P54289 1103 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 SUGP1Q8IWZ8 645 aaKnown RBP12.92□□□□□ -0.34
CLCN4-203ENST00000421085 SCFD1Q8WVM8 642 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 SYN2Q92777 582 aaPredicted RBP12.92□□□□□ -0.34
CLCN4-203ENST00000421085 TRIM54Q9BYV2 358 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 TUFT1Q9NNX1 390 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 ARHGEF38Q9NXL2 777 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 A0A1B0GW55 424 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 CSPG5O95196 566 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 DUX4L2P0CJ85 424 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 DUX4L3P0CJ86 424 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 DUX4L4P0CJ87 422 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 DUX4L5P0CJ88 424 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 DUX4L6P0CJ89 424 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 DUX4L7P0CJ90 424 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 EZH2Q15910 746 aaKnown RBP12.92□□□□□ -0.34
CLCN4-203ENST00000421085 RMDN1Q96DB5 314 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 KLHL4Q9C0H6 718 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 DUX4Q9UBX2 424 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 FEM1BQ9UK73 627 aa12.92□□□□□ -0.34
CLCN4-203ENST00000421085 RAD17O75943 681 aa12.91□□□□□ -0.34
CLCN4-203ENST00000421085 PDGFRAP16234 1089 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms