RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 KNOP1Q1ED39 458 aaKnown RBP23.14■■□□□ 1.29
CPNE1-211ENST00000420363 VARS2Q5ST30 1063 aaKnown RBP23.14■■□□□ 1.29
CPNE1-211ENST00000420363 C12orf56Q8IXR9 622 aa23.14■■□□□ 1.29
CPNE1-211ENST00000420363 ZSWIM2Q8NEG5 633 aa23.14■■□□□ 1.29
CPNE1-211ENST00000420363 GOLGA5Q8TBA6 731 aa23.14■■□□□ 1.29
CPNE1-211ENST00000420363 CCDC47Q96A33 483 aaKnown RBP23.14■■□□□ 1.29
CPNE1-211ENST00000420363 ASIC4Q96FT7 647 aa23.14■■□□□ 1.29
CPNE1-211ENST00000420363 ZDHHC7Q9NXF8 308 aa23.14■■□□□ 1.29
CPNE1-211ENST00000420363 HSPBP1Q9NZL4 362 aa23.14■■□□□ 1.29
CPNE1-211ENST00000420363 CDH22Q9UJ99 828 aa23.14■■□□□ 1.29
CPNE1-211ENST00000420363 ZDBF2Q9HCK1 2354 aa23.13■■□□□ 1.29
CPNE1-211ENST00000420363 SPDYE4A6NLX3 237 aa23.13■■□□□ 1.29
CPNE1-211ENST00000420363 H7C4K7 107 aa23.13■■□□□ 1.29
CPNE1-211ENST00000420363 PIRO00625 290 aa23.13■■□□□ 1.29
CPNE1-211ENST00000420363 RHOBTB3O94955 611 aa23.13■■□□□ 1.29
CPNE1-211ENST00000420363 GUCY2FP51841 1108 aa23.13■■□□□ 1.29
CPNE1-211ENST00000420363 STK4Q13043 487 aa23.13■■□□□ 1.29
CPNE1-211ENST00000420363 MRPL58Q14197 206 aaKnown RBP23.13■■□□□ 1.29
CPNE1-211ENST00000420363 C9orf57Q5W0N0 161 aa23.13■■□□□ 1.29
CPNE1-211ENST00000420363 SLC8B1Q6J4K2 584 aa23.13■■□□□ 1.29
CPNE1-211ENST00000420363 ZNF280DQ6N043 979 aa23.13■■□□□ 1.29
CPNE1-211ENST00000420363 GPR149Q86SP6 731 aa23.13■■□□□ 1.29
CPNE1-211ENST00000420363 FMR1NBQ8N0W7 255 aaPredicted RBP23.13■■□□□ 1.29
CPNE1-211ENST00000420363 TMEM174Q8WUU8 243 aa23.13■■□□□ 1.29
CPNE1-211ENST00000420363 PCIF1Q9H4Z3 704 aa23.13■■□□□ 1.29
CPNE1-211ENST00000420363 POMKQ9H5K3 350 aa23.13■■□□□ 1.29
CPNE1-211ENST00000420363 ARHGEF37A1IGU5 675 aa23.12■■□□□ 1.29
CPNE1-211ENST00000420363 TBC1D4O60343 1298 aa23.12■■□□□ 1.29
CPNE1-211ENST00000420363 PRR29P0C7W0 189 aa23.12■■□□□ 1.29
CPNE1-211ENST00000420363 FAM160A1Q05DH4 1040 aa23.12■■□□□ 1.29
CPNE1-211ENST00000420363 KCNB1Q14721 858 aa23.12■■□□□ 1.29
CPNE1-211ENST00000420363 SURF1Q15526 300 aa23.12■■□□□ 1.29
CPNE1-211ENST00000420363 ATAT1Q5SQI0 421 aa23.12■■□□□ 1.29
CPNE1-211ENST00000420363 RTL10Q7L3V2 364 aa23.12■■□□□ 1.29
CPNE1-211ENST00000420363 PALB2Q86YC2 1186 aa23.12■■□□□ 1.29
CPNE1-211ENST00000420363 GLYCTKQ8IVS8 523 aa23.12■■□□□ 1.29
CPNE1-211ENST00000420363 NELFCDQ8IXH7 590 aa23.12■■□□□ 1.29
CPNE1-211ENST00000420363 C12orf76Q8N812 135 aaPredicted RBP23.12■■□□□ 1.29
CPNE1-211ENST00000420363 KREMEN2Q8NCW0 462 aa23.12■■□□□ 1.29
CPNE1-211ENST00000420363 OXCT2Q9BYC2 517 aaPredicted RBP23.12■■□□□ 1.29
CPNE1-211ENST00000420363 CDY1Q9Y6F8 540 aa23.12■■□□□ 1.29
CPNE1-211ENST00000420363 SCN1AP35498 2009 aa23.11■■□□□ 1.29
CPNE1-211ENST00000420363 GOLGA8IPA6NC78 632 aa23.11■■□□□ 1.29
CPNE1-211ENST00000420363 ZNF233A6NK53 670 aa23.11■■□□□ 1.29
CPNE1-211ENST00000420363 GOLGA8JA6NMD2 632 aa23.11■■□□□ 1.29
CPNE1-211ENST00000420363 ADAM12O43184 909 aa23.11■■□□□ 1.29
CPNE1-211ENST00000420363 WEE2P0C1S8 567 aa23.11■■□□□ 1.29
CPNE1-211ENST00000420363 TYMPP19971 482 aa23.11■■□□□ 1.29
CPNE1-211ENST00000420363 WNT7BP56706 349 aa23.11■■□□□ 1.29
CPNE1-211ENST00000420363 LILRA4P59901 499 aa23.11■■□□□ 1.29
CPNE1-211ENST00000420363 TMC5Q6UXY8 1006 aa23.11■■□□□ 1.29
CPNE1-211ENST00000420363 ENGASEQ8NFI3 743 aa23.11■■□□□ 1.29
CPNE1-211ENST00000420363 CACTINQ8WUQ7 758 aaKnown RBP23.11■■□□□ 1.29
CPNE1-211ENST00000420363 ZNF560Q96MR9 790 aa23.11■■□□□ 1.29
CPNE1-211ENST00000420363 DPP3Q9NY33 737 aa23.11■■□□□ 1.29
CPNE1-211ENST00000420363 C2CD4DB7Z1M9 353 aa23.1■■□□□ 1.29
CPNE1-211ENST00000420363 PPEF2O14830 753 aa23.1■■□□□ 1.29
CPNE1-211ENST00000420363 KIF20AO95235 890 aa23.1■■□□□ 1.29
CPNE1-211ENST00000420363 POU2F2P09086 479 aa23.1■■□□□ 1.29
CPNE1-211ENST00000420363 AVPR2P30518 371 aa23.1■■□□□ 1.29
CPNE1-211ENST00000420363 HOXA9P31269 272 aa23.1■■□□□ 1.29
CPNE1-211ENST00000420363 OR1D2P34982 312 aa23.1■■□□□ 1.29
CPNE1-211ENST00000420363 SNW1Q13573 536 aaKnown RBP23.1■■□□□ 1.29
CPNE1-211ENST00000420363 LIN9Q5TKA1 542 aa23.1■■□□□ 1.29
CPNE1-211ENST00000420363 UBALD2Q8IYN6 164 aa23.1■■□□□ 1.29
CPNE1-211ENST00000420363 TMEM130Q8N3G9 435 aa23.1■■□□□ 1.29
CPNE1-211ENST00000420363 XXYLT1Q8NBI6 393 aa23.1■■□□□ 1.29
CPNE1-211ENST00000420363 CHMP5Q9NZZ3 219 aa23.1■■□□□ 1.29
CPNE1-211ENST00000420363 SORCS3Q9UPU3 1222 aa23.1■■□□□ 1.29
CPNE1-211ENST00000420363 ZMYND10O75800 440 aa23.09■■□□□ 1.29
CPNE1-211ENST00000420363 OAZ2O95190 189 aa23.09■■□□□ 1.29
CPNE1-211ENST00000420363 ODC1P11926 461 aa23.09■■□□□ 1.29
CPNE1-211ENST00000420363 PNPLA4P41247 253 aa23.09■■□□□ 1.29
CPNE1-211ENST00000420363 TAF6P49848 677 aa23.09■■□□□ 1.29
CPNE1-211ENST00000420363 VCPP55072 806 aaKnown RBP23.09■■□□□ 1.29
CPNE1-211ENST00000420363 ROR1Q01973 937 aa23.09■■□□□ 1.29
CPNE1-211ENST00000420363 YWHAHQ04917 246 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-211ENST00000420363 MTMR3Q13615 1198 aa23.09■■□□□ 1.29
CPNE1-211ENST00000420363 SNRNP35Q16560 246 aaKnown RBP23.09■■□□□ 1.29
CPNE1-211ENST00000420363 RSPO2Q6UXX9 243 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-211ENST00000420363 CBWD2Q8IUF1 395 aa23.09■■□□□ 1.29
CPNE1-211ENST00000420363 TIGD1Q96MW7 591 aa23.09■■□□□ 1.29
CPNE1-211ENST00000420363 PHOX2BQ99453 314 aa23.09■■□□□ 1.29
CPNE1-211ENST00000420363 ITGA11Q9UKX5 1188 aa23.09■■□□□ 1.29
CPNE1-211ENST00000420363 USTQ9Y2C2 406 aa23.09■■□□□ 1.29
CPNE1-211ENST00000420363 RFPL2O75678 378 aa23.08■■□□□ 1.29
CPNE1-211ENST00000420363 HNRNPA1P09651 372 aaKnown RBP eCLIP23.08■■□□□ 1.29
CPNE1-211ENST00000420363 TFAMQ00059 246 aaKnown RBP23.08■■□□□ 1.29
CPNE1-211ENST00000420363 TCF15Q12870 199 aa23.08■■□□□ 1.29
CPNE1-211ENST00000420363 UVSSAQ2YD98 709 aa23.08■■□□□ 1.29
CPNE1-211ENST00000420363 CTXN3Q4LDR2 81 aa23.08■■□□□ 1.29
CPNE1-211ENST00000420363 DSTYKQ6XUX3 929 aa23.08■■□□□ 1.29
CPNE1-211ENST00000420363 WDR49Q8IV35 697 aa23.08■■□□□ 1.29
CPNE1-211ENST00000420363 SLC9A9Q8IVB4 645 aa23.08■■□□□ 1.29
CPNE1-211ENST00000420363 C1orf127Q8N9H9 656 aa23.08■■□□□ 1.29
CPNE1-211ENST00000420363 NOC3LQ8WTT2 800 aaKnown RBP23.08■■□□□ 1.29
CPNE1-211ENST00000420363 ZNF707Q96C28 371 aaPredicted RBP23.08■■□□□ 1.29
CPNE1-211ENST00000420363 KCTD10Q9H3F6 313 aa23.08■■□□□ 1.29
CPNE1-211ENST00000420363 PDE11AQ9HCR9 933 aa23.08■■□□□ 1.29
CPNE1-211ENST00000420363 FBXL5Q9UKA1 691 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms