RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CHP1Q99653 195 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 NHEJ1Q9H9Q4 299 aaPredicted RBP15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 R3HCC1Q9Y3T6 440 aaKnown RBP15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 UMODL1Q5DID0 1318 aa15.3■□□□□ 0.04
SHMT1P1-201ENST00000419974 CYLC1P35663 651 aaPredicted RBP15.29■□□□□ 0.04
SHMT1P1-201ENST00000419974 ASPAP45381 313 aa15.29■□□□□ 0.04
SHMT1P1-201ENST00000419974 ZNF132P52740 706 aa15.29■□□□□ 0.04
SHMT1P1-201ENST00000419974 BMS1Q14692 1282 aaKnown RBP15.29■□□□□ 0.04
SHMT1P1-201ENST00000419974 ZNF667Q5HYK9 610 aa15.29■□□□□ 0.04
SHMT1P1-201ENST00000419974 MFSD5Q6N075 450 aa15.29■□□□□ 0.04
SHMT1P1-201ENST00000419974 ZNF677Q86XU0 584 aa15.29■□□□□ 0.04
SHMT1P1-201ENST00000419974 SPATA18Q8TC71 538 aa15.29■□□□□ 0.04
SHMT1P1-201ENST00000419974 HPDLQ96IR7 371 aa15.29■□□□□ 0.04
SHMT1P1-201ENST00000419974 GAD1Q99259 594 aa15.29■□□□□ 0.04
SHMT1P1-201ENST00000419974 PI4K2AQ9BTU6 479 aa15.29■□□□□ 0.04
SHMT1P1-201ENST00000419974 CXCL16Q9H2A7 254 aa15.29■□□□□ 0.04
SHMT1P1-201ENST00000419974 AGAP1Q9UPQ3 857 aa15.29■□□□□ 0.04
SHMT1P1-201ENST00000419974 EPN1Q9Y6I3 576 aaPredicted RBP15.29■□□□□ 0.04
SHMT1P1-201ENST00000419974 CITO14578 2027 aa15.29■□□□□ 0.04
SHMT1P1-201ENST00000419974 ABHD14A-ACY1A0A1B0GW23 586 aa15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 NDUFA10O95299 355 aa15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 POLR2BP30876 1174 aaKnown RBP15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 CYP2C18P33260 490 aa15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 CLCN1P35523 988 aa15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 MLH1P40692 756 aa15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 AARSP49588 968 aaKnown RBP eCLIP15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 KLHL30Q0D2K2 578 aa15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 INCA1Q0VD86 236 aa15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 C10orf76Q5T2E6 689 aa15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 GLB1LQ6UWU2 654 aa15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 RAD9BQ6WBX8 426 aa15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 RPUSD2Q8IZ73 545 aaKnown RBP15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 CCDC42Q96M95 316 aa15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 ZFP42Q96MM3 310 aa15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 RPS6KC1Q96S38 1066 aa15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 PRDM5Q9NQX1 630 aaPredicted RBP15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 TUBGCP4Q9UGJ1 667 aa15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 PYCARDQ9ULZ3 195 aa15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 NENFQ9UMX5 172 aa15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 LTBP2Q14767 1821 aa15.28■□□□□ 0.04
SHMT1P1-201ENST00000419974 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 SOWAHDA6NJG2 315 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 MEIS3P2A8K0S8 358 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 ESPNB1AK53 854 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 ZNF500O60304 480 aaPredicted RBP15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 TACC1O75410 805 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 KRT19P08727 400 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 KRT83P78385 493 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 SOX4Q06945 474 aaPredicted RBP15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 DSC1Q08554 894 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 TUSC3Q13454 348 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 IKBKEQ14164 716 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 SLC18A3Q16572 532 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 WDR72Q3MJ13 1102 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 SCARA3Q6AZY7 606 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 SPOPLQ6IQ16 392 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 VPS36Q86VN1 386 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 NPAS4Q8IUM7 802 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 TMEM199Q8N511 208 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 SLC30A5Q8TAD4 765 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 BADQ92934 168 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 KAT5Q92993 513 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 C18orf25Q96B23 403 aaPredicted RBP15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 LRCH3Q96II8 777 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 FAM84AQ96KN4 292 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 APOL6Q9BWW8 343 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 HAUS4Q9H6D7 363 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 SPTLC3Q9NUV7 552 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 RNF19AQ9NV58 838 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 KLK14Q9P0G3 267 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 KIAA1257Q9ULG3 409 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 ADGRG1Q9Y653 693 aa15.27■□□□□ 0.04
SHMT1P1-201ENST00000419974 GOLGA6L9A6NEM1 432 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 TMEM189-UBE2V1I3L0A0 370 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 ZSCAN12O43309 604 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 BAIAP3O94812 1187 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 PAEPP09466 180 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 RAG1P15918 1043 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 TAF6P49848 677 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 CCL23P55773 120 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 LILRA4P59901 499 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 PTK2Q05397 1052 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 UPP1Q16831 310 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 ARHGAP44Q17R89 818 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 SV2CQ496J9 727 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 ZNF571Q7Z3V5 609 aaPredicted RBP15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 TXLNBQ8N3L3 684 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 TOP6BLQ8N6T0 577 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 OLIG1Q8TAK6 271 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 EPS8L1Q8TE68 723 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 SCLYQ96I15 445 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 CISHQ9NSE2 258 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 MIOSQ9NXC5 875 aa15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 NOCTQ9UK39 431 aaKnown RBP15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 PDCD11Q14690 1871 aaKnown RBP15.26■□□□□ 0.03
SHMT1P1-201ENST00000419974 CARNS1A5YM72 827 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 KPNA7A9QM74 516 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 TUBB4AP04350 444 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 CCDC175P0C221 793 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 GZMAP12544 262 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms