RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 APEX2Q9UBZ4 518 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 GRID2IPA4D2P6 1211 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 DCDC2CA8MYV0 355 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 FGFR4P22455 802 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 CHMP1BQ7LBR1 199 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 SCFD2Q8WU76 684 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 GOLPH3LQ9H4A5 285 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 CLCN6P51797 869 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 ALDH18A1P54886 795 aaKnown RBP11.75□□□□□ -0.53
PTCH1-205ENST00000418258 ATP2C1P98194 919 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-205ENST00000418258 IPMKQ8NFU5 416 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 HPS3Q969F9 1004 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 HPDLQ96IR7 371 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 CINPQ9BW66 212 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-205ENST00000418258 MAFGO15525 162 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 ACADMP11310 421 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 RFC5P40937 340 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 HDAC4P56524 1084 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 MDH1BQ5I0G3 518 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 CDC42EP5Q6NZY7 148 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 VMP1Q96GC9 406 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 PRR12Q9ULL5 1215 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 ZNF543Q08ER8 600 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 ARHGEF26Q96DR7 871 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 COLEC11Q9BWP8 271 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 ZC4H2Q9NQZ6 224 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 SPASTQ9UBP0 616 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 MYO1GB0I1T2 1018 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 HBP1O60381 514 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 SFSWAPQ12872 951 aaKnown RBP11.75□□□□□ -0.53
PTCH1-205ENST00000418258 CUL3Q13618 768 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 LRRC14Q15048 493 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 ALX1Q15699 326 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 CHSY1Q86X52 802 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 ZNF555Q8NEP9 628 aa11.75□□□□□ -0.53
PTCH1-205ENST00000418258 RNASEH1O60930 286 aaKnown RBP11.74□□□□□ -0.53
PTCH1-205ENST00000418258 HAUS5O94927 633 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 MZF1P28698 734 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-205ENST00000418258 USP10Q14694 798 aaKnown RBP11.74□□□□□ -0.53
PTCH1-205ENST00000418258 PLEKHM3Q6ZWE6 761 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 SAMD7Q7Z3H4 446 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 UBA3Q8TBC4 463 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 ADNPQ9H2P0 1102 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 KLK14Q9P0G3 267 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 WDR35Q9P2L0 1181 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 DAGLAQ9Y4D2 1042 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 GGCXP38435 758 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 RGS2P41220 211 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 SIRT2Q8IXJ6 389 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 ARHGAP18Q8N392 663 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 PAWRQ96IZ0 340 aaKnown RBP11.74□□□□□ -0.53
PTCH1-205ENST00000418258 MOV10L1Q9BXT6 1211 aaKnown RBP11.74□□□□□ -0.53
PTCH1-205ENST00000418258 TASP1Q9H6P5 420 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 PRG3Q9Y2Y8 225 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-205ENST00000418258 ABCC3O15438 1527 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 CCDC22O60826 627 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 WEE2P0C1S8 567 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 TMA16Q96EY4 203 aaKnown RBP11.74□□□□□ -0.53
PTCH1-205ENST00000418258 REEP2Q9BRK0 252 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 KRT8P05787 483 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 PDHA1P08559 390 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 PPP2R2AP63151 447 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 RARS2Q5T160 578 aaKnown RBP11.74□□□□□ -0.53
PTCH1-205ENST00000418258 PLEKHA8Q96JA3 519 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-205ENST00000418258 C17orf80Q9BSJ5 609 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 ALKQ9UM73 1620 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 E2F8A0AVK6 867 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 SMTNL2Q2TAL5 461 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 PRR5LQ6MZQ0 368 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 UBE2Q2Q8WVN8 375 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 RNPC3Q96LT9 517 aaKnown RBP11.74□□□□□ -0.53
PTCH1-205ENST00000418258 ISCA1Q9BUE6 129 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 HDAC6Q9UBN7 1215 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 CLTCL1P53675 1640 aa11.74□□□□□ -0.53
PTCH1-205ENST00000418258 VGLL3A8MV65 326 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 H7C4K7 107 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 PDXKO00764 312 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 SEC24DO94855 1032 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 ATP1A1P05023 1023 aaKnown RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 MLNP12872 115 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 CHRM3P20309 590 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 NCKAP1LP55160 1127 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 TP53BP2Q13625 1128 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 DHX34Q14147 1143 aaKnown RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 AP1ARQ63HQ0 302 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 CLEC10AQ8IUN9 316 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 MB21D2Q8IYB1 491 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 SLC35G2Q8TBE7 412 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 STK33Q9BYT3 514 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 NFKBIL1Q9UBC1 381 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 TRPM1Q7Z4N2 1603 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 LRRIQ3A6PVS8 624 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 ASS1P00966 412 aaKnown RBP11.73□□□□□ -0.53
PTCH1-205ENST00000418258 YY1P25490 414 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 ANO5Q75V66 913 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 ATL2Q8NHH9 583 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 SPATA18Q8TC71 538 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 FAM187AA6NFU0 413 aa11.73□□□□□ -0.53
PTCH1-205ENST00000418258 GPR182O15218 404 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms