RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 CBWD6Q4V339 395 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 CBWD3Q5JTY5 395 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 CBWD5Q5RIA9 395 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 TMPRSS6Q8IU80 811 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 ZCCHC9Q8N567 271 aaKnown RBP8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 ZBTB8BQ8NAP8 495 aaPredicted RBP8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 DNAJC1Q96KC8 554 aaKnown RBP8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 DCLK3Q9C098 648 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 RIOX1Q9H6W3 641 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 KCNK13Q9HB14 408 aa8.48□□□□□ -1.05
HMGXB4-202ENST00000418170 UBAP1LF5GYI3 381 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 TGFB1I1O43294 461 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 ATMINO43313 823 aaPredicted RBP8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 MED24O75448 989 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 ADRA1DP25100 572 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 PIK3CAP42336 1068 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 ASPHQ12797 758 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 MPP3Q13368 585 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 C6orf163Q5TEZ5 329 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 TMCO4Q5TGY1 634 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 IZUMO3Q5VZ72 239 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 POTEGQ6S5H5 508 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 B3GNT6Q6ZMB0 384 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 RAPH1Q70E73 1250 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 ZNF554Q86TJ5 538 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 NOP9Q86U38 636 aaKnown RBP8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 CCDC89Q8N998 374 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 ZNF564Q8TBZ8 553 aaPredicted RBP8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 COA7Q96BR5 231 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 BTBD6Q96KE9 485 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 FAM84BQ96KN1 310 aaPredicted RBP8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 TTC1Q99614 292 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 UBA5Q9GZZ9 404 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 PPM1HQ9ULR3 514 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 TNS1Q9HBL0 1735 aaKnown RBP8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 A0A1W2PPM1 405 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 VILLO15195 856 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 ZBED4O75132 1171 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 HNRNPCP07910 306 aaKnown RBP eCLIP8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 KCNA1Q09470 495 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 RASSF3Q86WH2 238 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 SCUBE1Q8IWY4 988 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 SLC44A5Q8NCS7 719 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 MAML3Q96JK9 1138 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 MKNK1Q9BUB5 465 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 TMEM120AQ9BXJ8 343 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 MAK16Q9BXY0 300 aaKnown RBP8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 ZBTB1Q9Y2K1 713 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 MYO3BQ8WXR4 1341 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 AP1G1O43747 822 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 CIB2O75838 187 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 TM7SF2O76062 418 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 USP1O94782 785 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 TGDSO95455 350 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 BAG2O95816 211 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 CYP19A1P11511 503 aaPredicted RBP8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 UQCRBP14927 111 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 ADARP55265 1226 aaKnown RBP8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 ZNF746Q6NUN9 644 aaPredicted RBP8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 ZNF804AQ7Z570 1209 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 MARCH10Q8NA82 808 aaPredicted RBP8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 PIP4K2CQ8TBX8 421 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 NUP85Q9BW27 656 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 PPCSQ9HAB8 311 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 PCDH18Q9HCL0 1135 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 TIMMDC1Q9NPL8 285 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 WDR37Q9Y2I8 494 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 SH3GLB1Q9Y371 365 aa8.47□□□□□ -1.05
HMGXB4-202ENST00000418170 B2RBV5 119 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 FKBP6O75344 327 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 GCNT3O95395 438 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 DLDP09622 509 aaKnown RBP8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 GZMAP12544 262 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 KRT4P19013 534 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 PRDX5P30044 214 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 PLOD1Q02809 727 aaPredicted RBP8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 DLGAP5Q15398 846 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 NFIL3Q16649 462 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 PCNX4Q63HM2 1172 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 TTC7BQ86TV6 843 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 AMIGO3Q86WK7 504 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 PRICKLE1Q96MT3 831 aaPredicted RBP8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 CYTH2Q99418 400 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 NAP1L4Q99733 375 aaKnown RBP8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 IQCGQ9H095 443 aaKnown RBP8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 VPS11Q9H270 941 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 MANSC1Q9H8J5 431 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 NRXN2Q9P2S2 1712 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 PLA2G4CQ9UP65 541 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 ANKRD31Q8N7Z5 1873 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 NAV1Q8NEY1 1877 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 EML1O00423 815 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 FCHO1O14526 889 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 OATP04181 439 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 CYP1A2P05177 515 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 BCRP11274 1271 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 CDK4P11802 303 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 PLS3P13797 630 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 GTF2H1P32780 548 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms