RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 RTKN2Q8IZC4 609 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 ABRAQ8N0Z2 381 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 RMDN2Q96LZ7 410 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 NCAPGQ9BPX3 1015 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 ATP6V0A4Q9HBG4 840 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 DNPEPQ9ULA0 475 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 TTLL13PA6NNM8 815 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 PEX10O60683 326 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 STX2P32856 288 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 FSTL1Q12841 308 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 MTM1Q13496 603 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 PSMD6Q15008 389 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 TMED2Q15363 201 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 CCNG2Q16589 344 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 CGB2Q6NT52 195 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 MIS18BP1Q6P0N0 1132 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 NIM1KQ8IY84 436 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 FITM2Q8N6M3 262 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 MCPH1Q8NEM0 835 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 ASAP3Q8TDY4 903 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 CKAP2Q8WWK9 683 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 FAM81BQ96LP2 452 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 KIF9Q9HAQ2 790 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 C17orf75Q9HAS0 396 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 NOD2Q9HC29 1040 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 RBAKQ9NYW8 714 aaPredicted RBP15.37■□□□□ 0.05
HDAC9-208ENST00000417496 SLC9A2Q9UBY0 812 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 FBXO40Q9UH90 709 aa15.37■□□□□ 0.05
HDAC9-208ENST00000417496 LOC102724159A0A0B4J2E5 919 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 F8VP50 259 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 PSAPP07602 524 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 MYBL1P10243 752 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 ATP4AP20648 1035 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 HMGB2P26583 209 aaKnown RBP15.36■□□□□ 0.05
HDAC9-208ENST00000417496 POLGP54098 1239 aaPredicted RBP15.36■□□□□ 0.05
HDAC9-208ENST00000417496 GSCP56915 257 aaPredicted RBP15.36■□□□□ 0.05
HDAC9-208ENST00000417496 PWP2Q15269 919 aaKnown RBP15.36■□□□□ 0.05
HDAC9-208ENST00000417496 RBBP8NLQ8NC74 664 aaPredicted RBP15.36■□□□□ 0.05
HDAC9-208ENST00000417496 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.36■□□□□ 0.05
HDAC9-208ENST00000417496 SPOCK2Q92563 424 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 ZBED3Q96IU2 234 aaPredicted RBP15.36■□□□□ 0.05
HDAC9-208ENST00000417496 C10orf88Q9H8K7 445 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 A1CFQ9NQ94 594 aaKnown RBP15.36■□□□□ 0.05
HDAC9-208ENST00000417496 MAP3K20Q9NYL2 800 aaKnown RBP15.36■□□□□ 0.05
HDAC9-208ENST00000417496 L3MBTL1Q9Y468 752 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 IVNS1ABPQ9Y6Y0 642 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 RASA4BC9J798 803 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 RASA4O43374 803 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 ZC3H11AO75152 810 aaKnown RBP eCLIP15.36■□□□□ 0.05
HDAC9-208ENST00000417496 CST3P01034 146 aaPredicted RBP15.36■□□□□ 0.05
HDAC9-208ENST00000417496 DPEP1P16444 411 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 KLRC2P26717 231 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 FOXN2P32314 431 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 CLDN10P78369 228 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 MGAT5Q09328 741 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 NFX1Q12986 1120 aaKnown RBP15.36■□□□□ 0.05
HDAC9-208ENST00000417496 PREPLQ4J6C6 727 aaPredicted RBP15.36■□□□□ 0.05
HDAC9-208ENST00000417496 FAM182AQ5T1J6 154 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 LIN9Q5TKA1 542 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 SYDE1Q6ZW31 735 aaPredicted RBP15.36■□□□□ 0.05
HDAC9-208ENST00000417496 SPATA21Q7Z572 469 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 CCDC89Q8N998 374 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 MAIP1Q8WWC4 291 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 ECT2Q9H8V3 914 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 SAYSD1Q9NPB0 183 aa15.36■□□□□ 0.05
HDAC9-208ENST00000417496 SAE1Q9UBE0 346 aaPredicted RBP15.36■□□□□ 0.05
HDAC9-208ENST00000417496 POC1B-GALNT4F8VUJ3 575 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 MAN1A1P33908 653 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 MAGEA4P43358 317 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 NCALDP61601 193 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 PTP4A2Q12974 167 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 STRN3Q13033 797 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 EMC2Q15006 297 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 NBPF12Q5TAG4 269 aaPredicted RBP15.35■□□□□ 0.05
HDAC9-208ENST00000417496 MFSD7Q6UXD7 560 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 ABHD15Q6UXT9 468 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 SAMD7Q7Z3H4 446 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 ZNF677Q86XU0 584 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 TAB3Q8N5C8 712 aaPredicted RBP15.35■□□□□ 0.05
HDAC9-208ENST00000417496 MTMR14Q8NCE2 650 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 AGBL3Q8NEM8 1001 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 GPRASP2Q96D09 838 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 ZNF148Q9UQR1 794 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 A8MUI8 341 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 K7ERI5 159 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 BANF1O75531 89 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 SUN1O94901 812 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 KCNA3P22001 575 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 HMGCS2P54868 508 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 BPIFB4P59827 614 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 NOP14P78316 857 aaKnown RBP15.35■□□□□ 0.05
HDAC9-208ENST00000417496 ACCSLQ4AC99 568 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 PLEKHA7Q6IQ23 1121 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 KATNAL2Q8IYT4 538 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 NSUN6Q8TEA1 469 aaKnown RBP15.35■□□□□ 0.05
HDAC9-208ENST00000417496 PRCCQ92733 491 aaPredicted RBP15.35■□□□□ 0.05
HDAC9-208ENST00000417496 FAM212AQ96EL1 285 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 TRIM11Q96F44 468 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 SENP7Q9BQF6 1050 aa15.35■□□□□ 0.05
HDAC9-208ENST00000417496 GOLGA8SH3BPF8 625 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms