RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 KLHL5Q96PQ7 755 aa18.9■□□□□ 0.62
COMMD3-BMI1-201ENST00000417470 OXCT2Q9BYC2 517 aaPredicted RBP18.9■□□□□ 0.62
COMMD3-BMI1-201ENST00000417470 METTL14Q9HCE5 456 aaKnown RBP18.9■□□□□ 0.62
COMMD3-BMI1-201ENST00000417470 GDAP2Q9NXN4 497 aa18.9■□□□□ 0.62
COMMD3-BMI1-201ENST00000417470 TMEM63CQ9P1W3 806 aa18.9■□□□□ 0.62
COMMD3-BMI1-201ENST00000417470 AGAP1Q9UPQ3 857 aa18.9■□□□□ 0.62
COMMD3-BMI1-201ENST00000417470 CTNND2Q9UQB3 1225 aa18.9■□□□□ 0.62
COMMD3-BMI1-201ENST00000417470 REV3LO60673 3130 aa18.9■□□□□ 0.62
COMMD3-BMI1-201ENST00000417470 EYSQ5T1H1 3165 aa18.9■□□□□ 0.62
COMMD3-BMI1-201ENST00000417470 ATG2AQ2TAZ0 1938 aa18.9■□□□□ 0.62
COMMD3-BMI1-201ENST00000417470 KPNA7A9QM74 516 aa18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 SPTLC1O15269 473 aa18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 TBC1D4O60343 1298 aa18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 CLASP2O75122 1294 aaKnown RBP18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 OAZ2O95190 189 aa18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 FGFR1OPO95684 399 aaKnown RBP18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 GNA14O95837 355 aa18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 CYP11A1P05108 521 aa18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 CNPP09543 421 aaKnown RBP18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 TKTP29401 623 aaKnown RBP18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 NRIP1P48552 1158 aa18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 DLG4P78352 724 aa18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 CCDC85BQ15834 202 aaPredicted RBP18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 DPCR1Q3MIW9 517 aa18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 C15orf39Q6ZRI6 1047 aa18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 FRMD5Q7Z6J6 570 aa18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 CEP57Q86XR8 500 aa18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 AUTS2Q8WXX7 1259 aa18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 SENP8Q96LD8 212 aa18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 MTRRQ9UBK8 725 aa18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 COG5Q9UP83 839 aa18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 R3HCC1Q9Y3T6 440 aaKnown RBP18.89■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 I3L4J1 428 aa18.88■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 TEX28O15482 410 aa18.88■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 CST3P01034 146 aaPredicted RBP18.88■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 ADH1AP07327 375 aa18.88■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 ATICP31939 592 aa18.88■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 MARSP56192 900 aaKnown RBP18.88■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 MYO1EQ12965 1108 aa18.88■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 SKOR2Q2VWA4 1001 aaPredicted RBP18.88■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 ZACNQ401N2 412 aa18.88■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 DSTYKQ6XUX3 929 aa18.88■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 SPATA18Q8TC71 538 aa18.88■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 B3GALT6Q96L58 329 aa18.88■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 MED15Q96RN5 788 aa18.88■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 VRTNQ9H8Y1 702 aa18.88■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 DSEQ9UL01 958 aa18.88■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 H7C4K7 107 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 C2CD2LO14523 706 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 PER2O15055 1255 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 STX10O60499 249 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 CSPG5O95196 566 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 KRT19P08727 400 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 FAM163BP0C2L3 166 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 ODC1P11926 461 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 NDUFV1P49821 464 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 STX17P56962 302 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 PSMD5Q16401 504 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 VARS2Q5ST30 1063 aaKnown RBP18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 TDRD10Q5VZ19 366 aaKnown RBP18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 SASS6Q6UVJ0 657 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 SV2AQ7L0J3 742 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 DPH6Q7L8W6 267 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 LIMS2Q7Z4I7 341 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 RBM23Q86U06 439 aaKnown RBP18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 SLC22A17Q8WUG5 538 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 EEF2KMTQ96G04 330 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 FAM84AQ96KN4 292 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 CLSTN3Q9BQT9 956 aa18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 SRRTQ9BXP5 876 aaKnown RBP18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 ARMCX3Q9UH62 379 aaPredicted RBP18.87■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 PRUNE2Q8WUY3 3088 aa18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 CYB561D2O14569 222 aa18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 LETM1O95202 739 aaPredicted RBP18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 SLC34A2O95436 690 aa18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 KLRC2P26717 231 aa18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 GTF2F1P35269 517 aaKnown RBP eCLIP18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 CLCN4P51793 760 aa18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 SCARA3Q6AZY7 606 aa18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 SLC8B1Q6J4K2 584 aa18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 LILRA6Q6PI73 481 aa18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 PRSS55Q6UWB4 352 aaPredicted RBP18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 HDAC7Q8WUI4 952 aa18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 PPM1EQ8WY54 764 aa18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 HLA-CQ95604 372 aa18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 HPDLQ96IR7 371 aa18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 TMEM8AQ9HCN3 771 aa18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 ANO10Q9NW15 660 aa18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 HCFC2Q9Y5Z7 792 aa18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 SPTBN5Q9NRC6 3674 aaKnown RBP18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 SCN1AP35498 2009 aa18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 VWA8A3KMH1 1905 aa18.86■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 TULP1O00294 542 aaPredicted RBP18.85■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 PMM2O15305 246 aa18.85■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 SRGAP2BP0DMP2 458 aa18.85■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 CA8P35219 290 aa18.85■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 LTBRP36941 435 aa18.85■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 YWHAHQ04917 246 aaPredicted RBP18.85■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 PPP3CAQ08209 521 aa18.85■□□□□ 0.61
COMMD3-BMI1-201ENST00000417470 TRPC3Q13507 836 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms