RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 CASP1P29466 404 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 NTHL1P78549 312 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 FAM26FQ5R3K3 315 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 ARMCX5Q6P1M9 558 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 UNC13DQ70J99 1090 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 USP37Q86T82 979 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 NT5DC4Q86YG4 428 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 BRSK2Q8IWQ3 736 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 EFCAB13Q8IY85 973 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 LEO1Q8WVC0 666 aaPredicted RBP16.92■□□□□ 0.3
ITGB1-204ENST00000417122 SENP8Q96LD8 212 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 SPATA32Q96LK8 384 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 CBWD1Q9BRT8 395 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 OXCT2Q9BYC2 517 aaPredicted RBP16.92■□□□□ 0.3
ITGB1-204ENST00000417122 BLZF1Q9H2G9 400 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 CYP4F11Q9HBI6 524 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 DPP3Q9NY33 737 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 IGSF9Q9P2J2 1179 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 DOCK8Q8NF50 2099 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.91■□□□□ 0.3
ITGB1-204ENST00000417122 ARHGEF37A1IGU5 675 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 GOLGA8IPA6NC78 632 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 GOLGA8JA6NMD2 632 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 TULP1O00294 542 aaPredicted RBP16.91■□□□□ 0.3
ITGB1-204ENST00000417122 PRRG1O14668 218 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 SPTLC1O15269 473 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 EIF3DO15371 548 aaKnown RBP eCLIP16.91■□□□□ 0.3
ITGB1-204ENST00000417122 EXTL3O43909 919 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 LRG1P02750 347 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 ODC1P11926 461 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 LAMP2P13473 410 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 CPB1P15086 417 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 TYMPP19971 482 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 AFMP43652 599 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 TDGQ13569 410 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 TCEAL8Q8IYN2 117 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 CEP57L1Q8IYX8 460 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 GPD1LQ8N335 351 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 NOC3LQ8WTT2 800 aaKnown RBP16.91■□□□□ 0.3
ITGB1-204ENST00000417122 CHAMP1Q96JM3 812 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 HCFC1R1Q9NWW0 138 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 RBAKQ9NYW8 714 aaPredicted RBP16.91■□□□□ 0.3
ITGB1-204ENST00000417122 DNMT3BQ9UBC3 853 aaKnown RBP16.91■□□□□ 0.3
ITGB1-204ENST00000417122 AFF4Q9UHB7 1163 aaKnown RBP16.91■□□□□ 0.3
ITGB1-204ENST00000417122 SERTAD1Q9UHV2 236 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 ARIH1Q9Y4X5 557 aaPredicted RBP16.91■□□□□ 0.3
ITGB1-204ENST00000417122 ATP6V1DQ9Y5K8 247 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 TCHHQ07283 1943 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 SCN1AP35498 2009 aa16.91■□□□□ 0.3
ITGB1-204ENST00000417122 KIAA0391O15091 583 aaKnown RBP16.9■□□□□ 0.3
ITGB1-204ENST00000417122 SEC24AO95486 1093 aa16.9■□□□□ 0.3
ITGB1-204ENST00000417122 TAF6P49848 677 aa16.9■□□□□ 0.3
ITGB1-204ENST00000417122 WNT7BP56706 349 aa16.9■□□□□ 0.3
ITGB1-204ENST00000417122 EHHADHQ08426 723 aa16.9■□□□□ 0.3
ITGB1-204ENST00000417122 ADCY1Q08828 1119 aa16.9■□□□□ 0.3
ITGB1-204ENST00000417122 CUL4BQ13620 913 aa16.9■□□□□ 0.3
ITGB1-204ENST00000417122 OVOS1Q6IE37 1185 aa16.9■□□□□ 0.3
ITGB1-204ENST00000417122 EPM2AIP1Q7L775 607 aaPredicted RBP16.9■□□□□ 0.3
ITGB1-204ENST00000417122 SUGP1Q8IWZ8 645 aaKnown RBP16.9■□□□□ 0.3
ITGB1-204ENST00000417122 FBXL6Q8N531 539 aa16.9■□□□□ 0.3
ITGB1-204ENST00000417122 ZNF507Q8TCN5 953 aa16.9■□□□□ 0.3
ITGB1-204ENST00000417122 MAFFQ9ULX9 164 aa16.9■□□□□ 0.3
ITGB1-204ENST00000417122 ZFP37Q9Y6Q3 630 aaPredicted RBP16.9■□□□□ 0.3
ITGB1-204ENST00000417122 TSC2P49815 1807 aa16.9■□□□□ 0.3
ITGB1-204ENST00000417122 NOTCH4Q99466 2003 aa16.89■□□□□ 0.29
ITGB1-204ENST00000417122 A0A1B0GVL5 298 aa16.89■□□□□ 0.29
ITGB1-204ENST00000417122 PVALEFA0A1B0GWK0 134 aa16.89■□□□□ 0.29
ITGB1-204ENST00000417122 OR6C75A6NL08 312 aa16.89■□□□□ 0.29
ITGB1-204ENST00000417122 ACTN4O43707 911 aaKnown RBP16.89■□□□□ 0.29
ITGB1-204ENST00000417122 SLFN14P0C7P3 912 aa16.89■□□□□ 0.29
ITGB1-204ENST00000417122 PFKFB1P16118 471 aa16.89■□□□□ 0.29
ITGB1-204ENST00000417122 CMA1P23946 247 aa16.89■□□□□ 0.29
ITGB1-204ENST00000417122 HOXD13P35453 343 aa16.89■□□□□ 0.29
ITGB1-204ENST00000417122 TFAMQ00059 246 aaKnown RBP16.89■□□□□ 0.29
ITGB1-204ENST00000417122 BECN1Q14457 450 aa16.89■□□□□ 0.29
ITGB1-204ENST00000417122 PABPC1LQ4VXU2 614 aaKnown RBP16.89■□□□□ 0.29
ITGB1-204ENST00000417122 RNF19BQ6ZMZ0 732 aa16.89■□□□□ 0.29
ITGB1-204ENST00000417122 GRAMD1CQ8IYS0 662 aa16.89■□□□□ 0.29
ITGB1-204ENST00000417122 CACTINQ8WUQ7 758 aaKnown RBP16.89■□□□□ 0.29
ITGB1-204ENST00000417122 RSAD2Q8WXG1 361 aa16.89■□□□□ 0.29
ITGB1-204ENST00000417122 NXPE3Q969Y0 559 aa16.89■□□□□ 0.29
ITGB1-204ENST00000417122 CDH7Q9ULB5 785 aa16.89■□□□□ 0.29
ITGB1-204ENST00000417122 DUSP12Q9UNI6 340 aa16.89■□□□□ 0.29
ITGB1-204ENST00000417122 INSL5Q9Y5Q6 135 aa16.89■□□□□ 0.29
ITGB1-204ENST00000417122 CYB561D2O14569 222 aa16.88■□□□□ 0.29
ITGB1-204ENST00000417122 CYP11A1P05108 521 aa16.88■□□□□ 0.29
ITGB1-204ENST00000417122 RHOP08100 348 aa16.88■□□□□ 0.29
ITGB1-204ENST00000417122 OR4Q2P0C623 313 aa16.88■□□□□ 0.29
ITGB1-204ENST00000417122 PTPN2P17706 415 aa16.88■□□□□ 0.29
ITGB1-204ENST00000417122 MYBPC2Q14324 1141 aa16.88■□□□□ 0.29
ITGB1-204ENST00000417122 ITFG1Q8TB96 612 aa16.88■□□□□ 0.29
ITGB1-204ENST00000417122 SCFD1Q8WVM8 642 aa16.88■□□□□ 0.29
ITGB1-204ENST00000417122 FGF13Q92913 245 aa16.88■□□□□ 0.29
ITGB1-204ENST00000417122 PAGE5Q96GU1 130 aa16.88■□□□□ 0.29
ITGB1-204ENST00000417122 ZNF560Q96MR9 790 aa16.88■□□□□ 0.29
ITGB1-204ENST00000417122 SLC39A2Q9NP94 309 aa16.88■□□□□ 0.29
ITGB1-204ENST00000417122 HSPBP1Q9NZL4 362 aa16.88■□□□□ 0.29
ITGB1-204ENST00000417122 DSEQ9UL01 958 aa16.88■□□□□ 0.29
ITGB1-204ENST00000417122 HPSEQ9Y251 543 aa16.88■□□□□ 0.29
ITGB1-204ENST00000417122 UBE4BO95155 1302 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms