RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 ALPK3Q96L96 1907 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 GLRX3O76003 335 aaKnown RBP3.33□□□□□ -1.88
LINC00428-201ENST00000415620 ALDH1A2O94788 518 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 STK10O94804 968 aaKnown RBP3.33□□□□□ -1.88
LINC00428-201ENST00000415620 HLA-DOAP06340 250 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 EGR2P11161 476 aaPredicted RBP3.33□□□□□ -1.88
LINC00428-201ENST00000415620 POU3F3P20264 500 aaPredicted RBP3.33□□□□□ -1.88
LINC00428-201ENST00000415620 CASRP41180 1078 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 ZNF81P51508 661 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 ADCY1Q08828 1119 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 SERINC3Q13530 473 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 ZCCHC8Q6NZY4 707 aaKnown RBP3.33□□□□□ -1.88
LINC00428-201ENST00000415620 DRICH1Q6PGQ1 229 aaPredicted RBP3.33□□□□□ -1.88
LINC00428-201ENST00000415620 FBXO46Q6PJ61 603 aaPredicted RBP3.33□□□□□ -1.88
LINC00428-201ENST00000415620 UNQ6494/PRO21346Q6UXR6 183 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 PHYKPLQ8IUZ5 450 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 KIAA1958Q8N8K9 716 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 IL17RAQ96F46 866 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 RNF186Q9NXI6 227 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 SAGE1Q9NXZ1 904 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 CLCA2Q9UQC9 943 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 RPTORQ8N122 1335 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 CFAP47Q6ZTR5 3102 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 ANKRD36BQ8N2N9 1353 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 DCHS1Q96JQ0 3298 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 MYOM3Q5VTT5 1437 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 NSD3Q9BZ95 1437 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 ANKRD26Q9UPS8 1709 aa3.33□□□□□ -1.88
LINC00428-201ENST00000415620 KIAA0100Q14667 2235 aaKnown RBP3.32□□□□□ -1.88
LINC00428-201ENST00000415620 XIRP2A4UGR9 3374 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 MAFGO15525 162 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 SEC24DO94855 1032 aaPredicted RBP3.32□□□□□ -1.88
LINC00428-201ENST00000415620 PRPF6O94906 941 aaKnown RBP3.32□□□□□ -1.88
LINC00428-201ENST00000415620 EPHX2P34913 555 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 MPLP40238 635 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 GZMKP49863 264 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 CD69Q07108 199 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 PKN2Q16513 984 aaKnown RBP3.32□□□□□ -1.88
LINC00428-201ENST00000415620 METRNLQ641Q3 311 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 TAS1R1Q7RTX1 841 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 C1QL2Q7Z5L3 287 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 GRASPQ7Z6J2 395 aaPredicted RBP3.32□□□□□ -1.88
LINC00428-201ENST00000415620 DDX53Q86TM3 631 aaKnown RBP3.32□□□□□ -1.88
LINC00428-201ENST00000415620 CPEB3Q8NE35 698 aaKnown RBP3.32□□□□□ -1.88
LINC00428-201ENST00000415620 NGDNQ8NEJ9 315 aaKnown RBP3.32□□□□□ -1.88
LINC00428-201ENST00000415620 ASB10Q8WXI3 467 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 HIST1H2AHQ96KK5 128 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 GUCD1Q96NT3 240 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 HIST1H2AJQ99878 128 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 NOL10Q9BSC4 688 aaKnown RBP3.32□□□□□ -1.88
LINC00428-201ENST00000415620 MYL10Q9BUA6 226 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 TEX101Q9BY14 249 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 PCIF1Q9H4Z3 704 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 NCOA5Q9HCD5 579 aaKnown RBP3.32□□□□□ -1.88
LINC00428-201ENST00000415620 KMT5AQ9NQR1 393 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.32□□□□□ -1.88
LINC00428-201ENST00000415620 TNPO3Q9Y5L0 923 aaKnown RBP3.32□□□□□ -1.88
LINC00428-201ENST00000415620 RNF123Q5XPI4 1314 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 ABCC11Q96J66 1382 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 USP47Q96K76 1375 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 DAPK1P53355 1430 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 MUC6Q6W4X9 2439 aa3.32□□□□□ -1.88
LINC00428-201ENST00000415620 ANKRD31Q8N7Z5 1873 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 ARFGEF2Q9Y6D5 1785 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 YTHDC2Q9H6S0 1430 aaKnown RBP3.31□□□□□ -1.88
LINC00428-201ENST00000415620 CCDC7Q96M83 1385 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 MAST3O60307 1309 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 PTPDC1A2A3K4 754 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 FAM221BA6H8Z2 402 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 UNC119BA6NIH7 251 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 B4E1Z4 1266 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 H7C1D1 291 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 MATN4O95460 622 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 LY86O95711 162 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 SPATA31D3P0C874 917 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 DDX6P26196 483 aaKnown RBP eCLIP3.31□□□□□ -1.88
LINC00428-201ENST00000415620 RNASE9P60153 205 aaKnown RBP3.31□□□□□ -1.88
LINC00428-201ENST00000415620 MXRA7P84157 204 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 NHLH2Q02577 135 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 SRSF4Q08170 494 aaKnown RBP3.31□□□□□ -1.88
LINC00428-201ENST00000415620 SCAPQ12770 1279 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 TP53BP2Q13625 1128 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 PDCD4Q53EL6 469 aaKnown RBP3.31□□□□□ -1.88
LINC00428-201ENST00000415620 SPATA31D4Q6ZUB0 917 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 ARHGEF25Q86VW2 580 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 MSL3Q8N5Y2 521 aaKnown RBP3.31□□□□□ -1.88
LINC00428-201ENST00000415620 ZSWIM2Q8NEG5 633 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 OR5M3Q8NGP4 307 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 ELF4Q99607 663 aaPredicted RBP3.31□□□□□ -1.88
LINC00428-201ENST00000415620 SEMA4GQ9NTN9 838 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 SAMD15Q9P1V8 674 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 B4GALT6Q9UBX8 382 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 HDAC9Q9UKV0 1011 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 SPO11Q9Y5K1 396 aa3.31□□□□□ -1.88
LINC00428-201ENST00000415620 RGPD2P0DJD1 1756 aa3.3□□□□□ -1.88
LINC00428-201ENST00000415620 COL5A3P25940 1745 aaPredicted RBP3.3□□□□□ -1.88
LINC00428-201ENST00000415620 NRXN2Q9P2S2 1712 aa3.3□□□□□ -1.88
LINC00428-201ENST00000415620 CPSF1Q10570 1443 aaKnown RBP3.3□□□□□ -1.88
LINC00428-201ENST00000415620 CACNA1BQ00975 2339 aa3.3□□□□□ -1.88
LINC00428-201ENST00000415620 INSRP06213 1382 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms