RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CACNB3P54284 484 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 FAM193AP78312 1265 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 FAM189BP81408 668 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 RHDQ02161 417 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 OCA2Q04671 838 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 BEAN1Q3B7T3 259 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 SWSAP1Q6NVH7 229 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 RHOUQ7L0Q8 258 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 TMIEQ8NEW7 156 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 SLC25A43Q8WUT9 341 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 DDX17Q92841 729 aaKnown RBP4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 TNPO1Q92973 898 aaKnown RBP4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 TTC17Q96AE7 1141 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 MYEOVQ96EZ4 313 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 CCDC136Q96JN2 1154 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 ZNF768Q9H5H4 540 aaKnown RBP4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 ARMT1Q9H993 441 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 RSAD1Q9HA92 442 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 ATP6V0A4Q9HBG4 840 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 AKIP1Q9NQ31 210 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 KCNE5Q9UJ90 142 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 PCDHA6Q9UN73 950 aa4.82□□□□□ -1.64
HMGB1P11-201ENST00000413899 CCDC78A2IDD5 438 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 TMEM200CA6NKL6 621 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 E9PLN8 166 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 PHGDHO43175 533 aaKnown RBP4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 PRC1O43663 620 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 NCR1O76036 304 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 ELANEP08246 267 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 BMPR1AP36894 532 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 ARFIP2P53365 341 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 TBX4P57082 545 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 POU6F2P78424 691 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 CNN3Q15417 329 aaKnown RBP4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 KHDC1LQ5JSQ8 128 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 B3GNTL1Q67FW5 361 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 MAPKAPK5Q8IW41 473 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 KBTBD7Q8WVZ9 684 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 ANKS1AQ92625 1134 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 FUBP1Q96AE4 644 aaKnown RBP4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 TIFAQ96CG3 184 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 MARS2Q96GW9 593 aaKnown RBP4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 PLEKHG4BQ96PX9 1271 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 VKORC1Q9BQB6 163 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 TLR10Q9BXR5 811 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 C22orf23Q9BZE7 217 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 SIK2Q9H0K1 926 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 ZMAT3Q9HA38 289 aaKnown RBP4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 CNNM1Q9NRU3 951 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 TMEM74BQ9NUR3 256 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 PIH1D1Q9NWS0 290 aaKnown RBP4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 HSFX1Q9UBD0 423 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 FZD1Q9UP38 647 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 MED16Q9Y2X0 877 aa4.81□□□□□ -1.64
HMGB1P11-201ENST00000413899 GOLIM4O00461 696 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 MATN3O15232 486 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 CAND2O75155 1236 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 GPANK1O95872 356 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 GNAI2P04899 355 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 HLA-DOAP06340 250 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 NPR1P16066 1061 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 SOX8P57073 446 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 EXOSC9Q06265 439 aaKnown RBP4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 PIGFQ07326 219 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 TUBA3CQ13748 450 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 HABP2Q14520 560 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 LLGL1Q15334 1064 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 TUBA3EQ6PEY2 450 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 DARS2Q6PI48 645 aaKnown RBP4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 PPP1R32Q7Z5V6 425 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 CFAP52Q8N1V2 620 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 TMEM132CQ8N3T6 1108 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 Q8NA96 180 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 PDPRQ8NCN5 879 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 FAM156AQ8NDB6 213 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 IL31RAQ8NI17 732 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 BOD1Q96IK1 185 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 NT5C1BQ96P26 610 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 CNPPD1Q9BV87 410 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 SARGQ9BW04 601 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 DPH1Q9BZG8 443 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 IMPG2Q9BZV3 1241 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 TINAGL1Q9GZM7 467 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 GPRC5BQ9NZH0 403 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 VSX1Q9NZR4 365 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 NEU2Q9Y3R4 380 aa4.8□□□□□ -1.64
HMGB1P11-201ENST00000413899 A0A1W2PPL8 197 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 MYADML2A6NDP7 307 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 ZNF785A8K8V0 405 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 E7ENX8 843 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 MYO1FO00160 1098 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 THP07101 528 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 TRIM27P14373 513 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 LAG3P18627 525 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 HDCP19113 662 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 TNFRSF1AP19438 455 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 EN2P19622 333 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 PTGS2P35354 604 aa4.79□□□□□ -1.64
HMGB1P11-201ENST00000413899 ZNF135P52742 658 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms