RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 SMG5Q9UPR3 1016 aaKnown RBP9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 ZFP37Q9Y6Q3 630 aaPredicted RBP9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 KIF26AQ9ULI4 1882 aaPredicted RBP9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 GREB1Q4ZG55 1949 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 LAD1O00515 517 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 PTGESO14684 152 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 STX6O43752 255 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 HNRNPA1P09651 372 aaKnown RBP eCLIP9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 GLRA2P23416 452 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 VAMP1P23763 118 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 TARSP26639 723 aaKnown RBP9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 WEE1P30291 646 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 TOB1P50616 345 aaPredicted RBP9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 PRKCQQ04759 706 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 CSTF1Q05048 431 aaKnown RBP9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 TUSC3Q13454 348 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 TFDP1Q14186 410 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 MXD4Q14582 209 aaPredicted RBP9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 TSNAXIP1Q2TAA8 658 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 ZNF528Q3MIS6 628 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 LCE2DQ5TA82 110 aaPredicted RBP9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 FAM171A1Q5VUB5 890 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 SLC27A1Q6PCB7 646 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 TSSK4Q6SA08 328 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 CAPN12Q6ZSI9 719 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 TPRG1Q6ZUI0 275 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 MTSS1LQ765P7 747 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 CEP57Q86XR8 500 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 ZNF511Q8NB15 262 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 LNX1Q8TBB1 728 aaPredicted RBP9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 SLC7A14Q8TBB6 771 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 PIK3R5Q8WYR1 880 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 HS3ST6Q96QI5 342 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 TTPALQ9BTX7 342 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 SLC6A16Q9GZN6 736 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 POLR3FQ9H1D9 316 aaPredicted RBP9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 CXCL16Q9H2A7 254 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 PRMT8Q9NR22 394 aaPredicted RBP9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 FBXO4Q9UKT5 387 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 PCDHGA2Q9Y5H1 932 aa9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 CNOT1A5YKK6 2376 aaKnown RBP9.08□□□□□ -0.96
UPF3AP1-201ENST00000413731 SHISA7A6NL88 538 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 FAM170BA6NMN3 283 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 USO1O60763 962 aaKnown RBP9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 LILRB5O75023 590 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 TADA2AO75478 443 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 RECQL4O94761 1208 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 BMP15O95972 392 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 HOXA9P31269 272 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 ARL2P36404 184 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 ATXN1P54253 815 aaKnown RBP9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 ATP2C1P98194 919 aaPredicted RBP9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 RESTQ13127 1097 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 BECN1Q14457 450 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 SLC5A9Q2M3M2 681 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 SLC44A4Q53GD3 710 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 DTHD1Q6ZMT9 781 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 OTUD6AQ7L8S5 288 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 ZBTB44Q8NCP5 570 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 SNX29Q8TEQ0 813 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 NFKBIZQ9BYH8 718 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 EPC1Q9H2F5 836 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 PARD6AQ9NPB6 346 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 GPRC5CQ9NQ84 441 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 ZSCAN32Q9NX65 697 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 DNMT3BQ9UBC3 853 aaKnown RBP9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 LRWD1Q9UFC0 647 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 CDV3Q9UKY7 258 aaKnown RBP9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 MTMR6Q9Y217 621 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 SDK1Q7Z5N4 2213 aa9.07□□□□□ -0.96
UPF3AP1-201ENST00000413731 NUP210Q8TEM1 1887 aaPredicted RBP9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 MYH11P35749 1972 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 CHD8Q9HCK8 2581 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 A0A087WWV3 80 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 A0A1B0GUA9 196 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 VWA3AA6NCI4 1184 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 LRRIQ4A6NIV6 560 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 XYLBO75191 536 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 DGAT1O75907 488 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 SLITRK3O94933 977 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 LYPLA2O95372 231 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 POU2F2P09086 479 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 CEBPBP17676 345 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 IGFBP6P24592 240 aaPredicted RBP9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 CCT6AP40227 531 aaKnown RBP9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 PRPHP41219 470 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 MAGEA9P43362 315 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 RARRES1P49788 294 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 PFKPQ01813 784 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 POU5F1BQ06416 359 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 NCBP1Q09161 790 aaKnown RBP9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 ZRSR1Q15695 479 aaKnown RBP9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 NAB2Q15742 525 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 PABPC1LQ4VXU2 614 aaKnown RBP9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 CDCA2Q69YH5 1023 aaPredicted RBP9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 RSPO2Q6UXX9 243 aaPredicted RBP9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 ATRIPQ8WXE1 791 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 NELL1Q92832 810 aa9.06□□□□□ -0.96
UPF3AP1-201ENST00000413731 OSBPL6Q9BZF3 934 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms