RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 BMT2Q1RMZ1 405 aa20.39■□□□□ 0.85
TRIM56-202ENST00000412507 SLC8B1Q6J4K2 584 aa20.39■□□□□ 0.85
TRIM56-202ENST00000412507 ZNF280DQ6N043 979 aa20.39■□□□□ 0.85
TRIM56-202ENST00000412507 CYP26C1Q6V0L0 522 aa20.39■□□□□ 0.85
TRIM56-202ENST00000412507 KRBA2Q6ZNG9 492 aa20.39■□□□□ 0.85
TRIM56-202ENST00000412507 CCDC149Q6ZUS6 474 aa20.39■□□□□ 0.85
TRIM56-202ENST00000412507 NT5DC4Q86YG4 428 aa20.39■□□□□ 0.85
TRIM56-202ENST00000412507 PIDD1Q9HB75 910 aa20.39■□□□□ 0.85
TRIM56-202ENST00000412507 AGPAT3Q9NRZ7 376 aa20.39■□□□□ 0.85
TRIM56-202ENST00000412507 TECTAO75443 2155 aa20.39■□□□□ 0.85
TRIM56-202ENST00000412507 WDR27A2RRH5 827 aa20.38■□□□□ 0.85
TRIM56-202ENST00000412507 SPTLC1O15269 473 aa20.38■□□□□ 0.85
TRIM56-202ENST00000412507 ZNF202O95125 648 aa20.38■□□□□ 0.85
TRIM56-202ENST00000412507 PAPLNO95428 1278 aa20.38■□□□□ 0.85
TRIM56-202ENST00000412507 MYL1P05976 194 aa20.38■□□□□ 0.85
TRIM56-202ENST00000412507 STK4Q13043 487 aa20.38■□□□□ 0.85
TRIM56-202ENST00000412507 PPM1LQ5SGD2 360 aa20.38■□□□□ 0.85
TRIM56-202ENST00000412507 CBWD2Q8IUF1 395 aa20.38■□□□□ 0.85
TRIM56-202ENST00000412507 ZNF461Q8TAF7 563 aa20.38■□□□□ 0.85
TRIM56-202ENST00000412507 SLC7A14Q8TBB6 771 aa20.38■□□□□ 0.85
TRIM56-202ENST00000412507 FAM84AQ96KN4 292 aa20.38■□□□□ 0.85
TRIM56-202ENST00000412507 SENP8Q96LD8 212 aa20.38■□□□□ 0.85
TRIM56-202ENST00000412507 C1QTNF1Q9BXJ1 281 aa20.38■□□□□ 0.85
TRIM56-202ENST00000412507 RHOBTB2Q9BYZ6 727 aa20.38■□□□□ 0.85
TRIM56-202ENST00000412507 PDE11AQ9HCR9 933 aa20.38■□□□□ 0.85
TRIM56-202ENST00000412507 ZNF233A6NK53 670 aa20.37■□□□□ 0.85
TRIM56-202ENST00000412507 YWHAHQ04917 246 aaPredicted RBP20.37■□□□□ 0.85
TRIM56-202ENST00000412507 PSMD2Q13200 908 aa20.37■□□□□ 0.85
TRIM56-202ENST00000412507 TDRD5Q8NAT2 981 aaKnown RBP20.37■□□□□ 0.85
TRIM56-202ENST00000412507 KIAA0895Q8NCT3 520 aa20.37■□□□□ 0.85
TRIM56-202ENST00000412507 WDR6Q9NNW5 1121 aaKnown RBP20.37■□□□□ 0.85
TRIM56-202ENST00000412507 USTQ9Y2C2 406 aa20.37■□□□□ 0.85
TRIM56-202ENST00000412507 CLUHO75153 1309 aa20.36■□□□□ 0.85
TRIM56-202ENST00000412507 GOLGA6L4A6NEF3 574 aa20.36■□□□□ 0.85
TRIM56-202ENST00000412507 FAM86C2PA6NEL3 165 aa20.36■□□□□ 0.85
TRIM56-202ENST00000412507 CCL16O15467 120 aa20.36■□□□□ 0.85
TRIM56-202ENST00000412507 ABLIM3O94929 683 aa20.36■□□□□ 0.85
TRIM56-202ENST00000412507 RPN1P04843 607 aaKnown RBP20.36■□□□□ 0.85
TRIM56-202ENST00000412507 HNRNPA1P09651 372 aaKnown RBP eCLIP20.36■□□□□ 0.85
TRIM56-202ENST00000412507 TAF6P49848 677 aa20.36■□□□□ 0.85
TRIM56-202ENST00000412507 CYP2J2P51589 502 aa20.36■□□□□ 0.85
TRIM56-202ENST00000412507 KNOP1Q1ED39 458 aaKnown RBP20.36■□□□□ 0.85
TRIM56-202ENST00000412507 UVSSAQ2YD98 709 aa20.36■□□□□ 0.85
TRIM56-202ENST00000412507 LMBRD2Q68DH5 695 aaPredicted RBP20.36■□□□□ 0.85
TRIM56-202ENST00000412507 HS2ST1Q7LGA3 356 aa20.36■□□□□ 0.85
TRIM56-202ENST00000412507 USP37Q86T82 979 aa20.36■□□□□ 0.85
TRIM56-202ENST00000412507 RDH13Q8NBN7 331 aa20.36■□□□□ 0.85
TRIM56-202ENST00000412507 CACTINQ8WUQ7 758 aaKnown RBP20.36■□□□□ 0.85
TRIM56-202ENST00000412507 OAZ2O95190 189 aa20.35■□□□□ 0.85
TRIM56-202ENST00000412507 ITGB3P05106 788 aa20.35■□□□□ 0.85
TRIM56-202ENST00000412507 ODC1P11926 461 aa20.35■□□□□ 0.85
TRIM56-202ENST00000412507 TYMPP19971 482 aa20.35■□□□□ 0.85
TRIM56-202ENST00000412507 PAX3P23760 479 aa20.35■□□□□ 0.85
TRIM56-202ENST00000412507 POLR2BP30876 1174 aaKnown RBP20.35■□□□□ 0.85
TRIM56-202ENST00000412507 HOXA9P31269 272 aa20.35■□□□□ 0.85
TRIM56-202ENST00000412507 SNRPFP62306 86 aaKnown RBP20.35■□□□□ 0.85
TRIM56-202ENST00000412507 DPYDQ12882 1025 aa20.35■□□□□ 0.85
TRIM56-202ENST00000412507 SCARA3Q6AZY7 606 aa20.35■□□□□ 0.85
TRIM56-202ENST00000412507 OTOP3Q7RTS5 596 aa20.35■□□□□ 0.85
TRIM56-202ENST00000412507 C1orf127Q8N9H9 656 aa20.35■□□□□ 0.85
TRIM56-202ENST00000412507 ACSF2Q96CM8 615 aaPredicted RBP20.35■□□□□ 0.85
TRIM56-202ENST00000412507 KIAA1586Q9HCI6 787 aa20.35■□□□□ 0.85
TRIM56-202ENST00000412507 C11orf16Q9NQ32 467 aa20.35■□□□□ 0.85
TRIM56-202ENST00000412507 POLIQ9UNA4 740 aa20.35■□□□□ 0.85
TRIM56-202ENST00000412507 AGAP1Q9UPQ3 857 aa20.35■□□□□ 0.85
TRIM56-202ENST00000412507 PTPRJQ12913 1337 aa20.34■□□□□ 0.85
TRIM56-202ENST00000412507 SEC24AO95486 1093 aa20.34■□□□□ 0.85
TRIM56-202ENST00000412507 TMEM191BP0C7N4 346 aa20.34■□□□□ 0.85
TRIM56-202ENST00000412507 CPB1P15086 417 aa20.34■□□□□ 0.85
TRIM56-202ENST00000412507 ATF2P15336 505 aa20.34■□□□□ 0.85
TRIM56-202ENST00000412507 ELF1P32519 619 aa20.34■□□□□ 0.85
TRIM56-202ENST00000412507 SNRNP35Q16560 246 aaKnown RBP20.34■□□□□ 0.85
TRIM56-202ENST00000412507 TPGS2Q68CL5 300 aa20.34■□□□□ 0.85
TRIM56-202ENST00000412507 OVOS1Q6IE37 1185 aa20.34■□□□□ 0.85
TRIM56-202ENST00000412507 GRASPQ7Z6J2 395 aaPredicted RBP20.34■□□□□ 0.85
TRIM56-202ENST00000412507 ZDHHC14Q8IZN3 488 aa20.34■□□□□ 0.85
TRIM56-202ENST00000412507 PLCD3Q8N3E9 789 aa20.34■□□□□ 0.85
TRIM56-202ENST00000412507 XXYLT1Q8NBI6 393 aa20.34■□□□□ 0.85
TRIM56-202ENST00000412507 CCDC47Q96A33 483 aaKnown RBP20.34■□□□□ 0.85
TRIM56-202ENST00000412507 BORCS6Q96GS4 357 aa20.34■□□□□ 0.85
TRIM56-202ENST00000412507 MTMR12Q9C0I1 747 aa20.34■□□□□ 0.85
TRIM56-202ENST00000412507 CGNQ9P2M7 1197 aaKnown RBP20.34■□□□□ 0.85
TRIM56-202ENST00000412507 LIMD1Q9UGP4 676 aa20.34■□□□□ 0.85
TRIM56-202ENST00000412507 CYB561D2O14569 222 aa20.33■□□□□ 0.85
TRIM56-202ENST00000412507 N4BP1O75113 896 aaKnown RBP20.33■□□□□ 0.85
TRIM56-202ENST00000412507 XYLBO75191 536 aa20.33■□□□□ 0.85
TRIM56-202ENST00000412507 OR4Q2P0C623 313 aa20.33■□□□□ 0.85
TRIM56-202ENST00000412507 GBP2P32456 591 aaPredicted RBP20.33■□□□□ 0.85
TRIM56-202ENST00000412507 NTHL1P78549 312 aa20.33■□□□□ 0.85
TRIM56-202ENST00000412507 ADCY1Q08828 1119 aa20.33■□□□□ 0.85
TRIM56-202ENST00000412507 SURF1Q15526 300 aa20.33■□□□□ 0.85
TRIM56-202ENST00000412507 SV2CQ496J9 727 aa20.33■□□□□ 0.85
TRIM56-202ENST00000412507 TMEM31Q5JXX7 168 aa20.33■□□□□ 0.85
TRIM56-202ENST00000412507 RNF19BQ6ZMZ0 732 aa20.33■□□□□ 0.85
TRIM56-202ENST00000412507 C12orf56Q8IXR9 622 aa20.33■□□□□ 0.85
TRIM56-202ENST00000412507 FMR1NBQ8N0W7 255 aaPredicted RBP20.33■□□□□ 0.85
TRIM56-202ENST00000412507 CSGALNACT2Q8N6G5 542 aa20.33■□□□□ 0.85
TRIM56-202ENST00000412507 OR5B17Q8NGF7 314 aa20.33■□□□□ 0.85
TRIM56-202ENST00000412507 ANKRD36BP1Q96IX9 119 aa20.33■□□□□ 0.85
TRIM56-202ENST00000412507 ZNF560Q96MR9 790 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms