RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 A6NJY4 79 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 CAPN14A8MX76 684 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 CES2O00748 559 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 JAK2O60674 1132 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 ALOX5P09917 674 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 TRIM23P36406 574 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 HNRNPFP52597 415 aaKnown RBP5.51□□□□□ -1.53
HERC4-205ENST00000412272 KRT76Q01546 638 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 CTDSPL2Q05D32 466 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 C2orf54Q08AI8 447 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 C19orf57Q0VDD7 668 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 SNTA1Q13424 505 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 SLC39A14Q15043 492 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 KCNT1Q5JUK3 1230 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 FAM209BQ5JX69 171 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 ARHGAP36Q6ZRI8 547 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 UNC13DQ70J99 1090 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 MAMDC2Q7Z304 686 aaPredicted RBP5.51□□□□□ -1.53
HERC4-205ENST00000412272 METTL16Q86W50 562 aaKnown RBP5.51□□□□□ -1.53
HERC4-205ENST00000412272 CHMP6Q96FZ7 201 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 TOE1Q96GM8 510 aaKnown RBP5.51□□□□□ -1.53
HERC4-205ENST00000412272 PIF1Q9H611 641 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 PPP1R14DQ9NXH3 145 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 EMC3Q9P0I2 261 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 DBF4Q9UBU7 674 aaPredicted RBP5.51□□□□□ -1.53
HERC4-205ENST00000412272 CNOT8Q9UFF9 292 aaKnown RBP5.51□□□□□ -1.53
HERC4-205ENST00000412272 SNX12Q9UMY4 172 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 ATP11BQ9Y2G3 1177 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 TBX22Q9Y458 520 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 CACNG2Q9Y698 323 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 PDE2AO00408 941 aaPredicted RBP5.51□□□□□ -1.53
HERC4-205ENST00000412272 PI15O43692 258 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 SCO2O43819 266 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 ALX3O95076 343 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 HSPA6P17066 643 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 CDH3P22223 829 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 MAPKAPK2P49137 400 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 ADCY7P51828 1080 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 CACNB3P54284 484 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 C21orf58P58505 322 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 ADAM17P78536 824 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 RHAGQ02094 409 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 NONOQ15233 471 aaKnown RBP eCLIP5.51□□□□□ -1.533e-7■■■■□ 23.9
HERC4-205ENST00000412272 TMEM132EQ6IEE7 984 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 POMZP3Q6PJE2 187 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 IFT20Q8IY31 132 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 RHPN1Q8TCX5 695 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 SLC44A1Q8WWI5 657 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 PBKQ96KB5 322 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 NUDCD1Q96RS6 583 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 TM9SF2Q99805 663 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 TSEN34Q9BSV6 310 aaKnown RBP5.51□□□□□ -1.53
HERC4-205ENST00000412272 ZBED2Q9BTP6 218 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 FAM114A2Q9NRY5 505 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 TBC1D14Q9P2M4 693 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 RABGEF1Q9UJ41 708 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 POU2F3Q9UKI9 436 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 MRPL11Q9Y3B7 192 aaKnown RBP5.51□□□□□ -1.53
HERC4-205ENST00000412272 STARD13Q9Y3M8 1113 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 EPN1Q9Y6I3 576 aaPredicted RBP5.51□□□□□ -1.53
HERC4-205ENST00000412272 MINK1Q8N4C8 1332 aaPredicted RBP5.51□□□□□ -1.53
HERC4-205ENST00000412272 GRID2IPA4D2P6 1211 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 RTCAO00442 366 aaKnown RBP5.51□□□□□ -1.53
HERC4-205ENST00000412272 VWA5AO00534 786 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 PIGNO95427 931 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 KRT6AP02538 564 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 KRT6BP04259 564 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 FDX1P10109 184 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 RNASELQ05823 741 aaKnown RBP5.51□□□□□ -1.53
HERC4-205ENST00000412272 ZNF33BQ06732 778 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 CDC20Q12834 499 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 RAPGEF1Q13905 1077 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 DCAF6Q58WW2 860 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 CHADLQ6NUI6 762 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 KLHDC10Q6PID8 442 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 HEATR4Q86WZ0 1026 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 KBTBD2Q8IY47 623 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 ELMOD2Q8IZ81 293 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 CCDC33Q8N5R6 958 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 KCNH5Q8NCM2 988 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 MAP6Q96JE9 813 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 NLRP4Q96MN2 994 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 TSNARE1Q96NA8 513 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 DDX23Q9BUQ8 820 aaKnown RBP5.51□□□□□ -1.53
HERC4-205ENST00000412272 APOL5Q9BWW9 433 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 WNT5BQ9H1J7 359 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 VPS16Q9H269 839 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 PLGRKTQ9HBL7 147 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 SLC38A7Q9NVC3 462 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 PAQR5Q9NXK6 330 aaPredicted RBP5.51□□□□□ -1.53
HERC4-205ENST00000412272 SLC39A1Q9NY26 324 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 NCKIPSDQ9NZQ3 722 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 ENOPH1Q9UHY7 261 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 STRIP2Q9ULQ0 834 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 PCM1Q15154 2024 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 hCG_2039718K7EN88 272 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 E2F3O00716 465 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 POLR1CO15160 346 aaPredicted RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 ATMINO43313 823 aaPredicted RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 NDUFA10O95299 355 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms