RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 SLC5A9Q2M3M2 681 aa12.58□□□□□ -0.4
LINC00963-201ENST00000412141 SPATA1Q5VX52 437 aa12.58□□□□□ -0.4
LINC00963-201ENST00000412141 C9orf57Q5W0N0 161 aa12.58□□□□□ -0.4
LINC00963-201ENST00000412141 SLFN12LQ6IEE8 588 aa12.58□□□□□ -0.4
LINC00963-201ENST00000412141 RNF19BQ6ZMZ0 732 aa12.58□□□□□ -0.4
LINC00963-201ENST00000412141 NPAS3Q8IXF0 933 aa12.58□□□□□ -0.4
LINC00963-201ENST00000412141 ATOH1Q92858 354 aaPredicted RBP12.58□□□□□ -0.4
LINC00963-201ENST00000412141 HPS3Q969F9 1004 aa12.58□□□□□ -0.4
LINC00963-201ENST00000412141 SNX21Q969T3 373 aa12.58□□□□□ -0.4
LINC00963-201ENST00000412141 DHX58Q96C10 678 aa12.58□□□□□ -0.4
LINC00963-201ENST00000412141 TCEAL4Q96EI5 215 aa12.58□□□□□ -0.4
LINC00963-201ENST00000412141 FAM84AQ96KN4 292 aa12.58□□□□□ -0.4
LINC00963-201ENST00000412141 SENP8Q96LD8 212 aa12.58□□□□□ -0.4
LINC00963-201ENST00000412141 ACCSQ96QU6 501 aa12.58□□□□□ -0.4
LINC00963-201ENST00000412141 FAM213AQ9BRX8 229 aa12.58□□□□□ -0.4
LINC00963-201ENST00000412141 PCIF1Q9H4Z3 704 aa12.58□□□□□ -0.4
LINC00963-201ENST00000412141 INSL5Q9Y5Q6 135 aa12.58□□□□□ -0.4
LINC00963-201ENST00000412141 ANHXE9PGG2 379 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 M0QZQ0 153 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 PRPF6O94906 941 aaKnown RBP12.57□□□□□ -0.4
LINC00963-201ENST00000412141 SRFP11831 508 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 CEBPBP17676 345 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 PTPN2P17706 415 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 SCP2P22307 547 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 ADSSP30520 456 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 LILRA4P59901 499 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 TWF1Q12792 350 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 CWF19L1Q69YN2 538 aaKnown RBP12.57□□□□□ -0.4
LINC00963-201ENST00000412141 OVOS1Q6IE37 1185 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 TCEAL8Q8IYN2 117 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 HS6ST3Q8IZP7 471 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 GLIS3Q8NEA6 775 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 TMEM209Q96SK2 561 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 ST6GALNAC4Q9H4F1 302 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 SEL1LQ9UBV2 794 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 AFF4Q9UHB7 1163 aaKnown RBP12.57□□□□□ -0.4
LINC00963-201ENST00000412141 EXOC7Q9UPT5 735 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 SLC27A5Q9Y2P5 690 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 PCDHB13Q9Y5F0 798 aa12.57□□□□□ -0.4
LINC00963-201ENST00000412141 ARHGEF37A1IGU5 675 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 NRG2O14511 850 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-201ENST00000412141 GALR2O43603 387 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-201ENST00000412141 PPP1R37O75864 691 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 SOAT2O75908 522 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 ADRB2P07550 413 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 ZSCAN22P10073 491 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-201ENST00000412141 MYL4P12829 197 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 GJA1P17302 382 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 ABCD1P33897 745 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 CLCN5P51795 746 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 WNT7BP56706 349 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 TFAMQ00059 246 aaKnown RBP12.56□□□□□ -0.4
LINC00963-201ENST00000412141 DUSP4Q13115 394 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 PKP1Q13835 747 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 POSTNQ15063 836 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 L1TD1Q5T7N2 865 aaKnown RBP12.56□□□□□ -0.4
LINC00963-201ENST00000412141 TPGS2Q68CL5 300 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 IQCEQ6IPM2 695 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 POTEHQ6S545 545 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 CRELD2Q6UXH1 353 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-201ENST00000412141 GPIHBP1Q8IV16 184 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 CD302Q8IX05 232 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 CCDC65Q8IXS2 484 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 ELMOD1Q8N336 334 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 KCNN1Q92952 543 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 NXPE3Q969Y0 559 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 ZNF512Q96ME7 567 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-201ENST00000412141 PRRX2Q99811 253 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 PYM1Q9BRP8 204 aaKnown RBP12.56□□□□□ -0.4
LINC00963-201ENST00000412141 TBC1D17Q9HA65 648 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 DPP3Q9NY33 737 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 CEP72Q9P209 647 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 WNT16Q9UBV4 365 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 STYXL1Q9Y6J8 313 aa12.56□□□□□ -0.4
LINC00963-201ENST00000412141 ZFP37Q9Y6Q3 630 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-201ENST00000412141 PTPRZ1P23471 2315 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-201ENST00000412141 RIF1Q5UIP0 2472 aaKnown RBP12.55□□□□□ -0.4
LINC00963-201ENST00000412141 CYB561D2O14569 222 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 CUTAO60888 179 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 OAZ2O95190 189 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 F13A1P00488 732 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 ODC1P11926 461 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 AOC1P19801 751 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 CASP1P29466 404 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 CCR2P41597 374 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 ME1P48163 572 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 AARSP49588 968 aaKnown RBP eCLIP12.55□□□□□ -0.42e-6■■■■■ 65.8
LINC00963-201ENST00000412141 ASIC1P78348 528 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 SNW1Q13573 536 aaKnown RBP12.55□□□□□ -0.4
LINC00963-201ENST00000412141 CYP4A22Q5TCH4 519 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 ARMCX5Q6P1M9 558 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 SHC4Q6S5L8 630 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 MTSS1LQ765P7 747 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 PDZD4Q76G19 769 aaPredicted RBP12.55□□□□□ -0.4
LINC00963-201ENST00000412141 EFCAB13Q8IY85 973 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 TTC9BQ8N6N2 239 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 ATAD1Q8NBU5 361 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 HVCN1Q96D96 273 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 CBWD1Q9BRT8 395 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 STRA6Q9BX79 667 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms