RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 HOXD13P35453 343 aa19.19■□□□□ 0.66
LSM5-204ENST00000409909 AMPD3Q01432 767 aa19.19■□□□□ 0.66
LSM5-204ENST00000409909 TDGQ13569 410 aa19.19■□□□□ 0.66
LSM5-204ENST00000409909 ZNF280DQ6N043 979 aa19.19■□□□□ 0.66
LSM5-204ENST00000409909 DSTYKQ6XUX3 929 aa19.19■□□□□ 0.66
LSM5-204ENST00000409909 EFCAB13Q8IY85 973 aa19.19■□□□□ 0.66
LSM5-204ENST00000409909 TCEAL8Q8IYN2 117 aa19.19■□□□□ 0.66
LSM5-204ENST00000409909 FBXL6Q8N531 539 aa19.19■□□□□ 0.66
LSM5-204ENST00000409909 CBWD1Q9BRT8 395 aa19.19■□□□□ 0.66
LSM5-204ENST00000409909 DNMT3BQ9UBC3 853 aaKnown RBP19.19■□□□□ 0.66
LSM5-204ENST00000409909 ARHGEF37A1IGU5 675 aa19.18■□□□□ 0.66
LSM5-204ENST00000409909 GARTP22102 1010 aa19.18■□□□□ 0.66
LSM5-204ENST00000409909 ASIC1P78348 528 aa19.18■□□□□ 0.66
LSM5-204ENST00000409909 YWHAHQ04917 246 aaPredicted RBP19.18■□□□□ 0.66
LSM5-204ENST00000409909 TPGS2Q68CL5 300 aa19.18■□□□□ 0.66
LSM5-204ENST00000409909 ST13P5Q8NFI4 369 aaPredicted RBP19.18■□□□□ 0.66
LSM5-204ENST00000409909 ITFG1Q8TB96 612 aa19.18■□□□□ 0.66
LSM5-204ENST00000409909 PCIF1Q9H4Z3 704 aa19.18■□□□□ 0.66
LSM5-204ENST00000409909 TMEM206Q9H813 350 aa19.18■□□□□ 0.66
LSM5-204ENST00000409909 DPP3Q9NY33 737 aa19.18■□□□□ 0.66
LSM5-204ENST00000409909 FAM13BQ9NYF5 915 aa19.18■□□□□ 0.66
LSM5-204ENST00000409909 IGSF9Q9P2J2 1179 aa19.18■□□□□ 0.66
LSM5-204ENST00000409909 GOLGA8IPA6NC78 632 aa19.17■□□□□ 0.66
LSM5-204ENST00000409909 GOLGA8JA6NMD2 632 aa19.17■□□□□ 0.66
LSM5-204ENST00000409909 PRRG1O14668 218 aa19.17■□□□□ 0.66
LSM5-204ENST00000409909 IL18RAPO95256 599 aa19.17■□□□□ 0.66
LSM5-204ENST00000409909 ELF1P32519 619 aa19.17■□□□□ 0.66
LSM5-204ENST00000409909 EHHADHQ08426 723 aa19.17■□□□□ 0.66
LSM5-204ENST00000409909 RNF19BQ6ZMZ0 732 aa19.17■□□□□ 0.66
LSM5-204ENST00000409909 EPM2AIP1Q7L775 607 aaPredicted RBP19.17■□□□□ 0.66
LSM5-204ENST00000409909 SENP8Q96LD8 212 aa19.17■□□□□ 0.66
LSM5-204ENST00000409909 BLZF1Q9H2G9 400 aa19.17■□□□□ 0.66
LSM5-204ENST00000409909 CYP4F11Q9HBI6 524 aa19.17■□□□□ 0.66
LSM5-204ENST00000409909 KCNH3Q9ULD8 1083 aa19.17■□□□□ 0.66
LSM5-204ENST00000409909 ANHXE9PGG2 379 aa19.16■□□□□ 0.66
LSM5-204ENST00000409909 NARSO43776 548 aaKnown RBP19.16■□□□□ 0.66
LSM5-204ENST00000409909 VNN2O95498 520 aa19.16■□□□□ 0.66
LSM5-204ENST00000409909 OR4Q2P0C623 313 aa19.16■□□□□ 0.66
LSM5-204ENST00000409909 TYMPP19971 482 aa19.16■□□□□ 0.66
LSM5-204ENST00000409909 ADCY1Q08828 1119 aa19.16■□□□□ 0.66
LSM5-204ENST00000409909 PABPC1LQ4VXU2 614 aaKnown RBP19.16■□□□□ 0.66
LSM5-204ENST00000409909 IER5LQ5T953 404 aa19.16■□□□□ 0.66
LSM5-204ENST00000409909 SCARA3Q6AZY7 606 aa19.16■□□□□ 0.66
LSM5-204ENST00000409909 BRSK2Q8IWQ3 736 aa19.16■□□□□ 0.66
LSM5-204ENST00000409909 GRAMD1CQ8IYS0 662 aa19.16■□□□□ 0.66
LSM5-204ENST00000409909 SLC44A3Q8N4M1 653 aa19.16■□□□□ 0.66
LSM5-204ENST00000409909 LEO1Q8WVC0 666 aaPredicted RBP19.16■□□□□ 0.66
LSM5-204ENST00000409909 FGF13Q92913 245 aa19.16■□□□□ 0.66
LSM5-204ENST00000409909 FAM84AQ96KN4 292 aa19.16■□□□□ 0.66
LSM5-204ENST00000409909 MAGEF1Q9HAY2 307 aa19.16■□□□□ 0.66
LSM5-204ENST00000409909 AFF4Q9UHB7 1163 aaKnown RBP19.16■□□□□ 0.66
LSM5-204ENST00000409909 CDH7Q9ULB5 785 aa19.16■□□□□ 0.66
LSM5-204ENST00000409909 DUSP12Q9UNI6 340 aa19.16■□□□□ 0.66
LSM5-204ENST00000409909 INSL5Q9Y5Q6 135 aa19.16■□□□□ 0.66
LSM5-204ENST00000409909 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.15■□□□□ 0.66
LSM5-204ENST00000409909 EXTL3O43909 919 aa19.15■□□□□ 0.66
LSM5-204ENST00000409909 LDHAP00338 332 aaKnown RBP19.15■□□□□ 0.66
LSM5-204ENST00000409909 CPB1P15086 417 aa19.15■□□□□ 0.66
LSM5-204ENST00000409909 PLA2G5P39877 138 aa19.15■□□□□ 0.66
LSM5-204ENST00000409909 AFMP43652 599 aa19.15■□□□□ 0.66
LSM5-204ENST00000409909 VCPP55072 806 aaKnown RBP19.15■□□□□ 0.66
LSM5-204ENST00000409909 CUL4BQ13620 913 aa19.15■□□□□ 0.66
LSM5-204ENST00000409909 HTR4Q13639 388 aa19.15■□□□□ 0.66
LSM5-204ENST00000409909 SLC5A9Q2M3M2 681 aa19.15■□□□□ 0.66
LSM5-204ENST00000409909 FAM26FQ5R3K3 315 aa19.15■□□□□ 0.66
LSM5-204ENST00000409909 OVOS1Q6IE37 1185 aa19.15■□□□□ 0.66
LSM5-204ENST00000409909 STXBP4Q6ZWJ1 553 aa19.15■□□□□ 0.66
LSM5-204ENST00000409909 UNC13DQ70J99 1090 aa19.15■□□□□ 0.66
LSM5-204ENST00000409909 USP37Q86T82 979 aa19.15■□□□□ 0.66
LSM5-204ENST00000409909 SUGP1Q8IWZ8 645 aaKnown RBP19.15■□□□□ 0.66
LSM5-204ENST00000409909 ZNF507Q8TCN5 953 aa19.15■□□□□ 0.66
LSM5-204ENST00000409909 BORCS6Q96GS4 357 aa19.15■□□□□ 0.66
LSM5-204ENST00000409909 RBAKQ9NYW8 714 aaPredicted RBP19.15■□□□□ 0.66
LSM5-204ENST00000409909 SERTAD1Q9UHV2 236 aa19.15■□□□□ 0.66
LSM5-204ENST00000409909 ZFP37Q9Y6Q3 630 aaPredicted RBP19.15■□□□□ 0.66
LSM5-204ENST00000409909 KMT2EQ8IZD2 1858 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 OR6C75A6NL08 312 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 TULP1O00294 542 aaPredicted RBP19.14■□□□□ 0.65
LSM5-204ENST00000409909 ACTN4O43707 911 aaKnown RBP19.14■□□□□ 0.65
LSM5-204ENST00000409909 LRG1P02750 347 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 CYP11A1P05108 521 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 RHOP08100 348 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 SLFN14P0C7P3 912 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 ODC1P11926 461 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 PAX3P23760 479 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 ARMCX5Q6P1M9 558 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 POTEHQ6S545 545 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 NT5DC4Q86YG4 428 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 NOC3LQ8WTT2 800 aaKnown RBP19.14■□□□□ 0.65
LSM5-204ENST00000409909 NXPE3Q969Y0 559 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 SPATA32Q96LK8 384 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 TMEM209Q96SK2 561 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 RPP25Q9BUL9 199 aaKnown RBP19.14■□□□□ 0.65
LSM5-204ENST00000409909 OXCT2Q9BYC2 517 aaPredicted RBP19.14■□□□□ 0.65
LSM5-204ENST00000409909 CRISPLD1Q9H336 500 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 PDE11AQ9HCR9 933 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 MAFFQ9ULX9 164 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 TSC2P49815 1807 aa19.14■□□□□ 0.65
LSM5-204ENST00000409909 A0A1B0GVL5 298 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 EIF3DO15371 548 aaKnown RBP eCLIP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms