RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 DLG4P78352 724 aa24.14■■□□□ 1.45
PTCD3-203ENST00000409783 LRRC63Q05C16 580 aa24.14■■□□□ 1.45
PTCD3-203ENST00000409783 STIM1Q13586 685 aa24.14■■□□□ 1.45
PTCD3-203ENST00000409783 VARS2Q5ST30 1063 aaKnown RBP24.14■■□□□ 1.45
PTCD3-203ENST00000409783 RSPO2Q6UXX9 243 aaPredicted RBP24.14■■□□□ 1.45
PTCD3-203ENST00000409783 TRAPPC11Q7Z392 1133 aa24.14■■□□□ 1.45
PTCD3-203ENST00000409783 CSGALNACT2Q8N6G5 542 aa24.14■■□□□ 1.45
PTCD3-203ENST00000409783 TMC2Q8TDI7 906 aa24.14■■□□□ 1.45
PTCD3-203ENST00000409783 EEF2KMTQ96G04 330 aa24.14■■□□□ 1.45
PTCD3-203ENST00000409783 MSLNLQ96KJ4 702 aa24.14■■□□□ 1.45
PTCD3-203ENST00000409783 SENP8Q96LD8 212 aa24.14■■□□□ 1.45
PTCD3-203ENST00000409783 AGAP1Q9UPQ3 857 aa24.14■■□□□ 1.45
PTCD3-203ENST00000409783 TNNC2P02585 160 aa24.13■■□□□ 1.45
PTCD3-203ENST00000409783 EPCAMP16422 314 aa24.13■■□□□ 1.45
PTCD3-203ENST00000409783 TNNI1P19237 187 aa24.13■■□□□ 1.45
PTCD3-203ENST00000409783 KCNA5P22460 613 aa24.13■■□□□ 1.45
PTCD3-203ENST00000409783 KLRC2P26717 231 aa24.13■■□□□ 1.45
PTCD3-203ENST00000409783 NDUFV1P49821 464 aa24.13■■□□□ 1.45
PTCD3-203ENST00000409783 TAF6P49848 677 aa24.13■■□□□ 1.45
PTCD3-203ENST00000409783 CREMQ03060 361 aa24.13■■□□□ 1.45
PTCD3-203ENST00000409783 TTI2Q6NXR4 508 aa24.13■■□□□ 1.45
PTCD3-203ENST00000409783 LLGL2Q6P1M3 1020 aa24.13■■□□□ 1.45
PTCD3-203ENST00000409783 PDXDC1Q6P996 788 aa24.13■■□□□ 1.45
PTCD3-203ENST00000409783 FOXR2Q6PJQ5 311 aa24.13■■□□□ 1.45
PTCD3-203ENST00000409783 ANKS3Q6ZW76 656 aa24.13■■□□□ 1.45
PTCD3-203ENST00000409783 LRRC52Q8N7C0 313 aa24.13■■□□□ 1.45
PTCD3-203ENST00000409783 TSG101Q99816 390 aa24.13■■□□□ 1.45
PTCD3-203ENST00000409783 DUSP9Q99956 384 aaKnown RBP24.13■■□□□ 1.45
PTCD3-203ENST00000409783 MKNK1Q9BUB5 465 aa24.13■■□□□ 1.45
PTCD3-203ENST00000409783 BARX2Q9UMQ3 279 aaPredicted RBP24.13■■□□□ 1.45
PTCD3-203ENST00000409783 BACE2Q9Y5Z0 518 aa24.13■■□□□ 1.45
PTCD3-203ENST00000409783 ADH1AP07327 375 aa24.12■■□□□ 1.45
PTCD3-203ENST00000409783 PSMC2P35998 433 aaKnown RBP24.12■■□□□ 1.45
PTCD3-203ENST00000409783 RBP5P82980 135 aa24.12■■□□□ 1.45
PTCD3-203ENST00000409783 FKBP3Q00688 224 aaKnown RBP24.12■■□□□ 1.45
PTCD3-203ENST00000409783 KLHL10Q6JEL2 608 aa24.12■■□□□ 1.45
PTCD3-203ENST00000409783 LILRA6Q6PI73 481 aa24.12■■□□□ 1.45
PTCD3-203ENST00000409783 RBM43Q6ZSC3 357 aaKnown RBP24.12■■□□□ 1.45
PTCD3-203ENST00000409783 PPFIBP1Q86W92 1011 aa24.12■■□□□ 1.45
PTCD3-203ENST00000409783 FAM186BQ8IYM0 893 aa24.12■■□□□ 1.45
PTCD3-203ENST00000409783 NELFBQ8WX92 580 aa24.12■■□□□ 1.45
PTCD3-203ENST00000409783 TIMM13Q9Y5L4 95 aaPredicted RBP24.12■■□□□ 1.45
PTCD3-203ENST00000409783 KPNA7A9QM74 516 aa24.11■■□□□ 1.45
PTCD3-203ENST00000409783 H3BQ06 376 aaPredicted RBP24.11■■□□□ 1.45
PTCD3-203ENST00000409783 CETN3O15182 167 aa24.11■■□□□ 1.45
PTCD3-203ENST00000409783 MBD3O95983 291 aa24.11■■□□□ 1.45
PTCD3-203ENST00000409783 C1RP00736 705 aa24.11■■□□□ 1.45
PTCD3-203ENST00000409783 CST3P01034 146 aaPredicted RBP24.11■■□□□ 1.45
PTCD3-203ENST00000409783 TYMPP19971 482 aa24.11■■□□□ 1.45
PTCD3-203ENST00000409783 PNPLA4P41247 253 aa24.11■■□□□ 1.45
PTCD3-203ENST00000409783 ENPEPQ07075 957 aa24.11■■□□□ 1.45
PTCD3-203ENST00000409783 LEXMQ3ZCV2 418 aa24.11■■□□□ 1.45
PTCD3-203ENST00000409783 DSTYKQ6XUX3 929 aa24.11■■□□□ 1.45
PTCD3-203ENST00000409783 EP400NLQ6ZTU2 488 aa24.11■■□□□ 1.45
PTCD3-203ENST00000409783 GLYCTKQ8IVS8 523 aa24.11■■□□□ 1.45
PTCD3-203ENST00000409783 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.11■■□□□ 1.45
PTCD3-203ENST00000409783 APPL2Q8NEU8 664 aa24.11■■□□□ 1.45
PTCD3-203ENST00000409783 ATXN2LQ8WWM7 1075 aaKnown RBP24.11■■□□□ 1.45
PTCD3-203ENST00000409783 ZNF560Q96MR9 790 aa24.11■■□□□ 1.45
PTCD3-203ENST00000409783 MED15Q96RN5 788 aa24.11■■□□□ 1.45
PTCD3-203ENST00000409783 CTNND2Q9UQB3 1225 aa24.11■■□□□ 1.45
PTCD3-203ENST00000409783 UNC80Q8N2C7 3258 aa24.1■■□□□ 1.45
PTCD3-203ENST00000409783 OAZ2O95190 189 aa24.1■■□□□ 1.45
PTCD3-203ENST00000409783 C4BPAP04003 597 aaKnown RBP24.1■■□□□ 1.45
PTCD3-203ENST00000409783 CYP11A1P05108 521 aa24.1■■□□□ 1.45
PTCD3-203ENST00000409783 KRT19P08727 400 aa24.1■■□□□ 1.45
PTCD3-203ENST00000409783 VAMP7P51809 220 aa24.1■■□□□ 1.45
PTCD3-203ENST00000409783 SV2CQ496J9 727 aa24.1■■□□□ 1.45
PTCD3-203ENST00000409783 SLC8B1Q6J4K2 584 aa24.1■■□□□ 1.45
PTCD3-203ENST00000409783 ANKRD54Q6NXT1 300 aa24.1■■□□□ 1.45
PTCD3-203ENST00000409783 SYCE2Q6PIF2 218 aa24.1■■□□□ 1.45
PTCD3-203ENST00000409783 INTS8Q75QN2 995 aaKnown RBP24.1■■□□□ 1.45
PTCD3-203ENST00000409783 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.1■■□□□ 1.45
PTCD3-203ENST00000409783 CASP10Q92851 521 aa24.1■■□□□ 1.45
PTCD3-203ENST00000409783 IKBKBO14920 756 aa24.09■■□□□ 1.45
PTCD3-203ENST00000409783 TGM5O43548 720 aa24.09■■□□□ 1.45
PTCD3-203ENST00000409783 OR1D2P34982 312 aa24.09■■□□□ 1.45
PTCD3-203ENST00000409783 AP3M2P53677 418 aa24.09■■□□□ 1.45
PTCD3-203ENST00000409783 BFSP1Q12934 665 aa24.09■■□□□ 1.45
PTCD3-203ENST00000409783 PAK1Q13153 545 aa24.09■■□□□ 1.45
PTCD3-203ENST00000409783 RAB33AQ14088 237 aa24.09■■□□□ 1.45
PTCD3-203ENST00000409783 TDRD10Q5VZ19 366 aaKnown RBP24.09■■□□□ 1.45
PTCD3-203ENST00000409783 C15orf39Q6ZRI6 1047 aa24.09■■□□□ 1.45
PTCD3-203ENST00000409783 PALB2Q86YC2 1186 aa24.09■■□□□ 1.45
PTCD3-203ENST00000409783 GDAP2Q9NXN4 497 aa24.09■■□□□ 1.45
PTCD3-203ENST00000409783 FBXL5Q9UKA1 691 aa24.09■■□□□ 1.45
PTCD3-203ENST00000409783 CDY1Q9Y6F8 540 aa24.09■■□□□ 1.45
PTCD3-203ENST00000409783 H7C4K7 107 aa24.08■■□□□ 1.45
PTCD3-203ENST00000409783 CYB561D2O14569 222 aa24.08■■□□□ 1.45
PTCD3-203ENST00000409783 SLC16A3O15427 465 aaKnown RBP24.08■■□□□ 1.45
PTCD3-203ENST00000409783 VNN1O95497 513 aa24.08■■□□□ 1.45
PTCD3-203ENST00000409783 GLUD1P00367 558 aa24.08■■□□□ 1.45
PTCD3-203ENST00000409783 ODC1P11926 461 aa24.08■■□□□ 1.45
PTCD3-203ENST00000409783 STX17P56962 302 aa24.08■■□□□ 1.45
PTCD3-203ENST00000409783 ZACNQ401N2 412 aa24.08■■□□□ 1.45
PTCD3-203ENST00000409783 LIMS2Q7Z4I7 341 aa24.08■■□□□ 1.45
PTCD3-203ENST00000409783 MLKLQ8NB16 471 aa24.08■■□□□ 1.45
PTCD3-203ENST00000409783 S1PR5Q9H228 398 aa24.08■■□□□ 1.45
PTCD3-203ENST00000409783 BICDL2A1A5D9 508 aa24.07■■□□□ 1.44
PTCD3-203ENST00000409783 TRIM49P0CI25 452 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms