RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ZFP28Q8NHY6 868 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 LINC00476Q8WZB0 136 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 CAVIN3Q969G5 261 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 ADARB2Q9NS39 739 aaKnown RBP5.67□□□□□ -1.5
CLK1-203ENST00000409769 ANKFY1Q9P2R3 1169 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 INSL6Q9Y581 213 aa5.67□□□□□ -1.5
CLK1-203ENST00000409769 PIK3C2BO00750 1634 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 NOS1P29475 1434 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 KIAA0355O15063 1070 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 NDUFA10O95299 355 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 PDGFRBP09619 1106 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 LMO1P25800 156 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 FLT3LGP49771 235 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 RNASE9P60153 205 aaKnown RBP5.66□□□□□ -1.5
CLK1-203ENST00000409769 PCBP2Q15366 365 aaKnown RBP eCLIP5.66□□□□□ -1.5
CLK1-203ENST00000409769 TMEM240Q5SV17 173 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 GGT6Q6P531 493 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 CPEB3Q8NE35 698 aaKnown RBP5.66□□□□□ -1.5
CLK1-203ENST00000409769 TFAP2CQ92754 450 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 CHMP4CQ96CF2 233 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 CYFIP2Q96F07 1278 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 TCF7L1Q9HCS4 588 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 POGKQ9P215 609 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 TUBD1Q9UJT1 453 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 SYNMO15061 1565 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 SPATA31D1Q6ZQQ2 1576 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 NEURL4Q96JN8 1562 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 CLTCL1P53675 1640 aa5.66□□□□□ -1.5
CLK1-203ENST00000409769 PJA2O43164 708 aa5.65□□□□□ -1.5
CLK1-203ENST00000409769 NDUFS2O75306 463 aa5.65□□□□□ -1.5
CLK1-203ENST00000409769 GSPT1P15170 499 aaKnown RBP5.65□□□□□ -1.5
CLK1-203ENST00000409769 C5AR1P21730 350 aa5.65□□□□□ -1.5
CLK1-203ENST00000409769 DDX6P26196 483 aaKnown RBP eCLIP5.65□□□□□ -1.5
CLK1-203ENST00000409769 GUCY1A2P33402 732 aa5.65□□□□□ -1.5
CLK1-203ENST00000409769 SREBF1P36956 1147 aa5.65□□□□□ -1.5
CLK1-203ENST00000409769 RECQLP46063 649 aaPredicted RBP5.65□□□□□ -1.5
CLK1-203ENST00000409769 CCT2P78371 535 aaKnown RBP5.65□□□□□ -1.5
CLK1-203ENST00000409769 SP140Q13342 867 aa5.65□□□□□ -1.5
CLK1-203ENST00000409769 CLUL1Q15846 466 aa5.65□□□□□ -1.5
CLK1-203ENST00000409769 PTPN21Q16825 1174 aa5.65□□□□□ -1.5
CLK1-203ENST00000409769 BMT2Q1RMZ1 405 aa5.65□□□□□ -1.5
CLK1-203ENST00000409769 FAM47AQ5JRC9 791 aa5.65□□□□□ -1.5
CLK1-203ENST00000409769 ZNF572Q7Z3I7 529 aaPredicted RBP5.65□□□□□ -1.5
CLK1-203ENST00000409769 CMTR2Q8IYT2 770 aaKnown RBP5.65□□□□□ -1.5
CLK1-203ENST00000409769 TRMT2AQ8IZ69 625 aaKnown RBP5.65□□□□□ -1.5
CLK1-203ENST00000409769 CASKIN2Q8WXE0 1202 aa5.65□□□□□ -1.5
CLK1-203ENST00000409769 TEKT5Q96M29 485 aa5.65□□□□□ -1.5
CLK1-203ENST00000409769 SIN3AQ96ST3 1273 aa5.65□□□□□ -1.5
CLK1-203ENST00000409769 C3P01024 1663 aa5.65□□□□□ -1.51
CLK1-203ENST00000409769 ATRNL1Q5VV63 1379 aa5.65□□□□□ -1.51
CLK1-203ENST00000409769 CNTLNQ9NXG0 1405 aa5.65□□□□□ -1.51
CLK1-203ENST00000409769 KIF1BO60333 1816 aa5.64□□□□□ -1.51
CLK1-203ENST00000409769 MADDQ8WXG6 1647 aa5.64□□□□□ -1.51
CLK1-203ENST00000409769 TYRP1P17643 537 aa5.64□□□□□ -1.51
CLK1-203ENST00000409769 NEK2P51955 445 aa5.64□□□□□ -1.51
CLK1-203ENST00000409769 SLC16A1P53985 500 aa5.64□□□□□ -1.51
CLK1-203ENST00000409769 SEC24CP53992 1094 aa5.64□□□□□ -1.51
CLK1-203ENST00000409769 ADKP55263 362 aaKnown RBP5.64□□□□□ -1.51
CLK1-203ENST00000409769 SEPT2Q15019 361 aa5.64□□□□□ -1.51
CLK1-203ENST00000409769 PRR16Q569H4 304 aa5.64□□□□□ -1.51
CLK1-203ENST00000409769 PRAMEF14Q5SWL7 426 aa5.64□□□□□ -1.51
CLK1-203ENST00000409769 LRCH2Q5VUJ6 765 aa5.64□□□□□ -1.51
CLK1-203ENST00000409769 RD3Q7Z3Z2 195 aa5.64□□□□□ -1.51
CLK1-203ENST00000409769 SLC2A13Q96QE2 648 aa5.64□□□□□ -1.51
CLK1-203ENST00000409769 DMRT3Q9NQL9 472 aa5.64□□□□□ -1.51
CLK1-203ENST00000409769 FAM30AQ9NZY2 134 aa5.64□□□□□ -1.51
CLK1-203ENST00000409769 SAP30BPQ9UHR5 308 aaKnown RBP5.64□□□□□ -1.51
CLK1-203ENST00000409769 EPN1Q9Y6I3 576 aaPredicted RBP5.64□□□□□ -1.51
CLK1-203ENST00000409769 FPGT-TNNI3KV9GXZ4 949 aa5.64□□□□□ -1.51
CLK1-203ENST00000409769 SPATA31E1Q6ZUB1 1445 aa5.64□□□□□ -1.51
CLK1-203ENST00000409769 ERVK-7P63135 1459 aa5.64□□□□□ -1.51
CLK1-203ENST00000409769 UGGT1Q9NYU2 1555 aa5.63□□□□□ -1.51
CLK1-203ENST00000409769 IFT172Q9UG01 1749 aa5.63□□□□□ -1.51
CLK1-203ENST00000409769 MYO5BQ9ULV0 1848 aa5.63□□□□□ -1.51
CLK1-203ENST00000409769 MARCH11A6NNE9 402 aa5.63□□□□□ -1.51
CLK1-203ENST00000409769 IL2RBP14784 551 aa5.63□□□□□ -1.51
CLK1-203ENST00000409769 ADSLP30566 484 aaPredicted RBP5.63□□□□□ -1.51
CLK1-203ENST00000409769 SLC6A9P48067 706 aa5.63□□□□□ -1.51
CLK1-203ENST00000409769 ELLP55199 621 aaPredicted RBP5.63□□□□□ -1.51
CLK1-203ENST00000409769 PDCD4Q53EL6 469 aaKnown RBP5.63□□□□□ -1.51
CLK1-203ENST00000409769 FAM102AQ5T9C2 384 aaPredicted RBP5.63□□□□□ -1.51
CLK1-203ENST00000409769 PNMA8AQ86V59 439 aaPredicted RBP5.63□□□□□ -1.51
CLK1-203ENST00000409769 SYT12Q8IV01 421 aa5.63□□□□□ -1.51
CLK1-203ENST00000409769 NTN5Q8WTR8 489 aaPredicted RBP5.63□□□□□ -1.51
CLK1-203ENST00000409769 CAMKK2Q96RR4 588 aa5.63□□□□□ -1.51
CLK1-203ENST00000409769 MANSC1Q9H8J5 431 aa5.63□□□□□ -1.51
CLK1-203ENST00000409769 LANCL2Q9NS86 450 aa5.63□□□□□ -1.51
CLK1-203ENST00000409769 ATP11BQ9Y2G3 1177 aa5.63□□□□□ -1.51
CLK1-203ENST00000409769 SIK3Q9Y2K2 1263 aa5.63□□□□□ -1.51
CLK1-203ENST00000409769 IPPQ9Y573 584 aa5.63□□□□□ -1.51
CLK1-203ENST00000409769 ZMYM3Q14202 1370 aa5.63□□□□□ -1.51
CLK1-203ENST00000409769 CCDC144AA2RUR9 1427 aa5.63□□□□□ -1.51
CLK1-203ENST00000409769 ADGRB3O60242 1522 aa5.63□□□□□ -1.51
CLK1-203ENST00000409769 RIMS1Q86UR5 1692 aaKnown RBP5.63□□□□□ -1.51
CLK1-203ENST00000409769 XPOTO43592 962 aaKnown RBP5.62□□□□□ -1.51
CLK1-203ENST00000409769 SGTAO43765 313 aa5.62□□□□□ -1.51
CLK1-203ENST00000409769 ESRRBO95718 433 aa5.62□□□□□ -1.51
CLK1-203ENST00000409769 EGR2P11161 476 aaPredicted RBP5.62□□□□□ -1.51
CLK1-203ENST00000409769 ALOX15P16050 662 aaPredicted RBP5.62□□□□□ -1.51
CLK1-203ENST00000409769 IL12RB1P42701 662 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms