RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 THEGQ9P2T0 379 aa17.79■□□□□ 0.44
TSPAN4-208ENST00000409531 NT5C1B-RDH14C9J2C7 533 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 NCK2O43639 380 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 LRPAP1P30533 357 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 RBP5P82980 135 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 UBXN1Q04323 297 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 DSC1Q08554 894 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 NAB2Q15742 525 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 CBWD6Q4V339 395 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 CBWD3Q5JTY5 395 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 CBWD5Q5RIA9 395 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 PDE12Q6L8Q7 609 aaKnown RBP17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 C1orf127Q8N9H9 656 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 HLA-CQ95604 372 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 C18orf25Q96B23 403 aaPredicted RBP17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 IMPG2Q9BZV3 1241 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 RTN4Q9NQC3 1192 aaKnown RBP17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 TLR9Q9NR96 1032 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 IFNKQ9P0W0 207 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 DNAJB4Q9UDY4 337 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 TUBGCP4Q9UGJ1 667 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 RAPGEFL1Q9UHV5 662 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 COQ4Q9Y3A0 265 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 SCN1AP35498 2009 aa17.78■□□□□ 0.44
TSPAN4-208ENST00000409531 FSD2A1L4K1 749 aa17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 ITGB3P05106 788 aa17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 KRT19P08727 400 aa17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 IRS1P35568 1242 aa17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 PNPLA4P41247 253 aa17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 PIK3CAP42336 1068 aa17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 ERVFC1P60507 584 aa17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 SOX4Q06945 474 aaPredicted RBP17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 NCOA4Q13772 614 aa17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 GBP6Q6ZN66 633 aa17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 CCDC150Q8NCX0 1101 aa17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 PPP2R3CQ969Q6 453 aa17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 TMEM169Q96HH4 297 aa17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 ZNF560Q96MR9 790 aa17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 TMEM175Q9BSA9 504 aa17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 TRIM5Q9C035 493 aa17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 GRPEL1Q9HAV7 217 aa17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 FAN1Q9Y2M0 1017 aa17.77■□□□□ 0.44
TSPAN4-208ENST00000409531 KIAA1671Q9BY89 1806 aa17.77■□□□□ 0.43
TSPAN4-208ENST00000409531 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 ANO9A1A5B4 782 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 B4GALT3O60512 393 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 CSPG5O95196 566 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 HLA-DRAP01903 254 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 PAX3P23760 479 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 ATICP31939 592 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 SLC11A1P49279 550 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 MRPS5P82675 430 aaKnown RBP17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 MYO1EQ12965 1108 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 NR1I3Q14994 352 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 EXOC3L4Q17RC7 722 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 AAK1Q2M2I8 961 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 C9orf57Q5W0N0 161 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 COLGALT2Q8IYK4 626 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 LRRC52Q8N7C0 313 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 TAS1R2Q8TE23 839 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 TAF4BQ92750 862 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 IGSF21Q96ID5 467 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 GOLGA2P5Q9HBQ8 144 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 RAB20Q9NX57 234 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 GCNT4Q9P109 453 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 SIX4Q9UIU6 781 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 AGAP1Q9UPQ3 857 aa17.76■□□□□ 0.43
TSPAN4-208ENST00000409531 CASTOR2A6NHX0 329 aa17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 PODXLO00592 558 aa17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 PIRO00625 290 aa17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 NRP1O14786 923 aa17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 COL9A1P20849 921 aa17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 POLR2BP30876 1174 aaKnown RBP17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 MRE11P49959 708 aa17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 GUCY2FP51841 1108 aa17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 UPP1Q16831 310 aa17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 SGSM1Q2NKQ1 1148 aa17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 WDR44Q5JSH3 913 aa17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 TMC7Q7Z402 723 aa17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 FAM84AQ96KN4 292 aa17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 NAP1L5Q96NT1 182 aaPredicted RBP17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 ERGIC2Q96RQ1 377 aa17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 XPO4Q9C0E2 1151 aaKnown RBP17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 NGRNQ9NPE2 291 aaKnown RBP17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 REV3LO60673 3130 aa17.75■□□□□ 0.43
TSPAN4-208ENST00000409531 A0A1W2PQC6 194 aa17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 FSCN2O14926 492 aa17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 CLSTN1O94985 981 aa17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 VNN1O95497 513 aa17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 STAU1O95793 577 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 OR1G1P47890 313 aa17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 CLCNKBP51801 687 aa17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 HYAL1Q12794 435 aa17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 BMS1Q14692 1282 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 COL19A1Q14993 1142 aa17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 SV2CQ496J9 727 aa17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 DCLRE1AQ6PJP8 1040 aa17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 DDX53Q86TM3 631 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 TMEM173Q86WV6 379 aaPredicted RBP17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 EHBP1Q8NDI1 1231 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms