RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 NCANO14594 1321 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 SMIM28A0A1B0GU29 152 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 PPEF2O14830 753 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 MGEA5O60502 916 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 CAND2O75155 1236 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 TMEM253P0C7T8 217 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 CKBP12277 381 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 KCNE1P15382 129 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 ABCB4P21439 1286 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 GNA15P30679 374 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 NAP1L1P55209 391 aaKnown RBP15.04■□□□□ -0
GPNMB-203ENST00000409458 BPIFB4P59827 614 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 TRAF7Q6Q0C0 670 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 ZNF677Q86XU0 584 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 BEST2Q8NFU1 509 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 MYRIPQ8NFW9 859 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 TRIM58Q8NG06 486 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 NOX5Q96PH1 765 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 DEFB118Q96PH6 123 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 THAP2Q9H0W7 228 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 ISCUQ9H1K1 167 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 SCN1AP35498 2009 aa15.04■□□□□ -0
GPNMB-203ENST00000409458 MEIS3P2A8K0S8 358 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 ENC1O14682 589 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 STAU1O95793 577 aaKnown RBP15.03■□□□□ -0
GPNMB-203ENST00000409458 ATP1A1P05023 1023 aaKnown RBP15.03■□□□□ -0
GPNMB-203ENST00000409458 CCL5P13501 91 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 ARHGEF26Q96DR7 871 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 FAXDC2Q96IV6 333 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 ALS2CR12Q96Q35 445 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 UBQLN1Q9UMX0 589 aaKnown RBP15.03■□□□□ -0
GPNMB-203ENST00000409458 MRFAP1Q9Y605 127 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 MYH10P35580 1976 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 A0A0A6YYK5 440 aaPredicted RBP15.03■□□□□ -0
GPNMB-203ENST00000409458 ANKRD62A6NC57 917 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 RTN2O75298 545 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 FTLP02792 175 aaPredicted RBP15.03■□□□□ -0
GPNMB-203ENST00000409458 CFHP08603 1231 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 GZMAP12544 262 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 CDH8P55286 799 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 YWHAEP62258 255 aaKnown RBP15.03■□□□□ -0
GPNMB-203ENST00000409458 AMPD2Q01433 879 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 DSC3Q14574 896 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 CLEC16AQ2KHT3 1053 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 ZNF394Q53GI3 561 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 CTNNBL1Q8WYA6 563 aaPredicted RBP15.03■□□□□ -0
GPNMB-203ENST00000409458 RNF208Q9H0X6 261 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 OGDHLQ9ULD0 1010 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 PCDHGC5Q9Y5F6 944 aa15.03■□□□□ -0
GPNMB-203ENST00000409458 CEP350Q5VT06 3117 aa15.02■□□□□ -0
GPNMB-203ENST00000409458 UQCRHLA0A096LP55 91 aa15.02□□□□□ -0.01
GPNMB-203ENST00000409458 GRID2IPA4D2P6 1211 aa15.02□□□□□ -0.01
GPNMB-203ENST00000409458 PTGESO14684 152 aa15.02□□□□□ -0.01
GPNMB-203ENST00000409458 THAP12O43422 761 aa15.02□□□□□ -0.01
GPNMB-203ENST00000409458 PALMO75781 387 aa15.02□□□□□ -0.01
GPNMB-203ENST00000409458 UQCRHP07919 91 aa15.02□□□□□ -0.01
GPNMB-203ENST00000409458 ZSCAN20P17040 1043 aaPredicted RBP15.02□□□□□ -0.01
GPNMB-203ENST00000409458 SSTR3P32745 418 aaPredicted RBP15.02□□□□□ -0.01
GPNMB-203ENST00000409458 CDK7P50613 346 aa15.02□□□□□ -0.01
GPNMB-203ENST00000409458 TERF1P54274 439 aa15.02□□□□□ -0.01
GPNMB-203ENST00000409458 SOX4Q06945 474 aaPredicted RBP15.02□□□□□ -0.01
GPNMB-203ENST00000409458 MBTPS1Q14703 1052 aa15.02□□□□□ -0.01
GPNMB-203ENST00000409458 C9orf57Q5W0N0 161 aa15.02□□□□□ -0.01
GPNMB-203ENST00000409458 LPPQ93052 612 aa15.02□□□□□ -0.01
GPNMB-203ENST00000409458 ZFP42Q96MM3 310 aa15.02□□□□□ -0.01
GPNMB-203ENST00000409458 HMGXB4Q9UGU5 601 aa15.02□□□□□ -0.01
GPNMB-203ENST00000409458 PUF60Q9UHX1 559 aaKnown RBP15.02□□□□□ -0.01
GPNMB-203ENST00000409458 ANO9A1A5B4 782 aa15.01□□□□□ -0.01
GPNMB-203ENST00000409458 CYP1A1P04798 512 aaPredicted RBP15.01□□□□□ -0.01
GPNMB-203ENST00000409458 UNGP13051 313 aaPredicted RBP15.01□□□□□ -0.01
GPNMB-203ENST00000409458 ITGA4P13612 1032 aa15.01□□□□□ -0.01
GPNMB-203ENST00000409458 P4HA1P13674 534 aa15.01□□□□□ -0.01
GPNMB-203ENST00000409458 BRD2P25440 801 aaKnown RBP15.01□□□□□ -0.01
GPNMB-203ENST00000409458 MLH1P40692 756 aa15.01□□□□□ -0.01
GPNMB-203ENST00000409458 TNNC1P63316 161 aa15.01□□□□□ -0.01
GPNMB-203ENST00000409458 PASD1Q8IV76 773 aa15.01□□□□□ -0.01
GPNMB-203ENST00000409458 FAM126BQ8IXS8 530 aa15.01□□□□□ -0.01
GPNMB-203ENST00000409458 LRRC52Q8N7C0 313 aa15.01□□□□□ -0.01
GPNMB-203ENST00000409458 LRRN4CLQ8ND94 238 aa15.01□□□□□ -0.01
GPNMB-203ENST00000409458 RFFLQ8WZ73 363 aa15.01□□□□□ -0.01
GPNMB-203ENST00000409458 TSPAN18Q96SJ8 248 aa15.01□□□□□ -0.01
GPNMB-203ENST00000409458 ZSWIM1Q9BR11 485 aa15.01□□□□□ -0.01
GPNMB-203ENST00000409458 CYP3A43Q9HB55 503 aa15.01□□□□□ -0.01
GPNMB-203ENST00000409458 GOLGA2P5Q9HBQ8 144 aa15.01□□□□□ -0.01
GPNMB-203ENST00000409458 OSGEPQ9NPF4 335 aa15.01□□□□□ -0.01
GPNMB-203ENST00000409458 SQORQ9Y6N5 450 aa15.01□□□□□ -0.01
GPNMB-203ENST00000409458 TLR3O15455 904 aaKnown RBP15□□□□□ -0.01
GPNMB-203ENST00000409458 ATMINO43313 823 aaPredicted RBP15□□□□□ -0.01
GPNMB-203ENST00000409458 XPOTO43592 962 aaKnown RBP15□□□□□ -0.01
GPNMB-203ENST00000409458 CILPO75339 1184 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 NOP2P46087 812 aaKnown RBP15□□□□□ -0.01
GPNMB-203ENST00000409458 C1QTNF8P60827 252 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 MYO1EQ12965 1108 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 ORC1Q13415 861 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 NAA35Q5VZE5 725 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 PAPD7Q5XG87 772 aaKnown RBP15□□□□□ -0.01
GPNMB-203ENST00000409458 ACAD10Q6JQN1 1059 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 HACE1Q8IYU2 909 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 USP38Q8NB14 1042 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 TPCN2Q8NHX9 752 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms