RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 ZC3H12DA2A288 527 aaKnown RBP6□□□□□ -1.45
CLK1-202ENST00000409403 VWA3AA6NCI4 1184 aa6□□□□□ -1.45
CLK1-202ENST00000409403 DVL2O14641 736 aa6□□□□□ -1.45
CLK1-202ENST00000409403 EIF3HO15372 352 aaKnown RBP eCLIP6□□□□□ -1.45
CLK1-202ENST00000409403 PRKD3O94806 890 aa6□□□□□ -1.45
CLK1-202ENST00000409403 GNAI2P04899 355 aa6□□□□□ -1.45
CLK1-202ENST00000409403 MPOP05164 745 aa6□□□□□ -1.45
CLK1-202ENST00000409403 TOP1P11387 765 aaKnown RBP6□□□□□ -1.45
CLK1-202ENST00000409403 NR1I3Q14994 352 aa6□□□□□ -1.45
CLK1-202ENST00000409403 TTF1Q15361 905 aaPredicted RBP6□□□□□ -1.45
CLK1-202ENST00000409403 SNCBQ16143 134 aa6□□□□□ -1.45
CLK1-202ENST00000409403 CCDC38Q502W7 563 aa6□□□□□ -1.45
CLK1-202ENST00000409403 SYDE2Q5VT97 1194 aa6□□□□□ -1.45
CLK1-202ENST00000409403 BROXQ5VW32 411 aa6□□□□□ -1.45
CLK1-202ENST00000409403 CCDC70Q6NSX1 233 aa6□□□□□ -1.45
CLK1-202ENST00000409403 CWC27Q6UX04 472 aaKnown RBP6□□□□□ -1.45
CLK1-202ENST00000409403 ABI1Q8IZP0 508 aa6□□□□□ -1.45
CLK1-202ENST00000409403 CLRN3Q8NCR9 226 aa6□□□□□ -1.45
CLK1-202ENST00000409403 P3H4Q92791 437 aa6□□□□□ -1.45
CLK1-202ENST00000409403 MENTQ9BUN1 341 aa6□□□□□ -1.45
CLK1-202ENST00000409403 NAA15Q9BXJ9 866 aaKnown RBP6□□□□□ -1.45
CLK1-202ENST00000409403 CAPS2Q9BXY5 557 aa6□□□□□ -1.45
CLK1-202ENST00000409403 CCDC8Q9H0W5 538 aaPredicted RBP6□□□□□ -1.45
CLK1-202ENST00000409403 ZFP64Q9NPA5 681 aa6□□□□□ -1.45
CLK1-202ENST00000409403 ZNF277Q9NRM2 450 aaPredicted RBP6□□□□□ -1.45
CLK1-202ENST00000409403 KLC4Q9NSK0 619 aa6□□□□□ -1.45
CLK1-202ENST00000409403 TRHDEQ9UKU6 1024 aa6□□□□□ -1.45
CLK1-202ENST00000409403 TELO2Q9Y4R8 837 aa6□□□□□ -1.45
CLK1-202ENST00000409403 TRIM17Q9Y577 477 aa6□□□□□ -1.45
CLK1-202ENST00000409403 TJP1Q07157 1748 aa6□□□□□ -1.45
CLK1-202ENST00000409403 TCRBV5S2A0A599 114 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 TARSL2A2RTX5 802 aaKnown RBP5.99□□□□□ -1.45
CLK1-202ENST00000409403 CTAGE9A4FU28 777 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 GOLGA6CA6NDK9 693 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 F8W031 263 aaPredicted RBP5.99□□□□□ -1.45
CLK1-202ENST00000409403 H3BQV1 296 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 K7ESF4 209 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 HIP1O00291 1037 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 LIN7AO14910 233 aaPredicted RBP5.99□□□□□ -1.45
CLK1-202ENST00000409403 PARNO95453 639 aaKnown RBP5.99□□□□□ -1.45
CLK1-202ENST00000409403 LTFP02788 710 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 CCDC175P0C221 793 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 GOLGA6DP0CG33 693 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 PTPN1P18031 435 aaKnown RBP5.99□□□□□ -1.45
CLK1-202ENST00000409403 PHC1P78364 1004 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 OS9Q13438 667 aaPredicted RBP5.99□□□□□ -1.45
CLK1-202ENST00000409403 STIM1Q13586 685 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 GPC2Q8N158 579 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 MAB21L3Q8N8X9 362 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 MAFAQ8NHW3 353 aaPredicted RBP5.99□□□□□ -1.45
CLK1-202ENST00000409403 BCAS4Q8TDM0 211 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 ZNF483Q8TF39 744 aaPredicted RBP5.99□□□□□ -1.45
CLK1-202ENST00000409403 PIGBQ92521 554 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 MRPS27Q92552 414 aaKnown RBP5.99□□□□□ -1.45
CLK1-202ENST00000409403 DHX58Q96C10 678 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 SAAL1Q96ER3 474 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 KIRREL1Q96J84 757 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 JAKMIP1Q96N16 626 aaKnown RBP5.99□□□□□ -1.45
CLK1-202ENST00000409403 SMAD5Q99717 465 aaKnown RBP5.99□□□□□ -1.45
CLK1-202ENST00000409403 LSG1Q9H089 658 aaKnown RBP5.99□□□□□ -1.45
CLK1-202ENST00000409403 R3HDMLQ9H3Y0 253 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 VCPKMTQ9H867 229 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 ANKZF1Q9H8Y5 726 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 RIC8BQ9NVN3 520 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 GOLGA6AQ9NYA3 693 aa5.99□□□□□ -1.45
CLK1-202ENST00000409403 FAM90A27PA6NNH2 459 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 NUDT19A8MXV4 375 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 H0YIN7 160 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 BUB1BO60566 1050 aaPredicted RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 RTN2O75298 545 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 PRPF6O94906 941 aaKnown RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 CYP17A1P05093 508 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 PECAM1P16284 738 aaPredicted RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 SDHBP21912 280 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 PAX7P23759 505 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 FNTAP49354 379 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 IRAK1P51617 712 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 EPHB1P54762 984 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 SMAD3P84022 425 aaKnown RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 CKAP4Q07065 602 aaKnown RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 SLC9A5Q14940 896 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 TMEM132BQ14DG7 1078 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 SEC23AQ15436 765 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 SMAD2Q15796 467 aaKnown RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 PLEKHO1Q53GL0 409 aaPredicted RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 ADGRF1Q5T601 910 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 BTBD8Q5XKL5 378 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 ISM2Q6H9L7 571 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 NAA16Q6N069 864 aaPredicted RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 VSTM4Q8IW00 320 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 C3orf20Q8ND61 904 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 CCHCR1Q8TD31 782 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 CLEC4DQ8WXI8 215 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 LTV1Q96GA3 475 aaPredicted RBP5.98□□□□□ -1.45
CLK1-202ENST00000409403 PGBD1Q96JS3 809 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 OSBPL9Q96SU4 736 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 RCOR1Q9UKL0 485 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 LAMB2P55268 1798 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 MRC1P22897 1456 aa5.98□□□□□ -1.45
CLK1-202ENST00000409403 ZSWIM8A7E2V4 1837 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms