RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 CXCL9Q07325 125 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 CCDC15Q0P6D6 951 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 CD302Q8IX05 232 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 CNPY4Q8N129 248 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 KDM4CQ9H3R0 1056 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 FHOD1Q9Y613 1164 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 ATP1A1P05023 1023 aaKnown RBP26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 TUBE1Q9UJT0 475 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 GYG2O15488 501 aa26.31■■□□□ 1.8
SPIRE1-202ENST00000409402 ABI2Q9NYB9 513 aaPredicted RBP26.31■■□□□ 1.8
SPIRE1-202ENST00000409402 GFAPP14136 432 aa26.31■■□□□ 1.8
SPIRE1-202ENST00000409402 GTF2H1P32780 548 aa26.31■■□□□ 1.8
SPIRE1-202ENST00000409402 ZDHHC9Q9Y397 364 aa26.31■■□□□ 1.8
SPIRE1-202ENST00000409402 DCCP43146 1447 aa26.31■■□□□ 1.8
SPIRE1-202ENST00000409402 PDK1Q15118 436 aa26.31■■□□□ 1.8
SPIRE1-202ENST00000409402 TSPAN17Q96FV3 270 aa26.31■■□□□ 1.8
SPIRE1-202ENST00000409402 ITIH6Q6UXX5 1313 aa26.31■■□□□ 1.8
SPIRE1-202ENST00000409402 FMR1Q06787 632 aaKnown RBP eCLIP26.31■■□□□ 1.8
SPIRE1-202ENST00000409402 NDUFS3O75489 264 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 SUPT20HL2P0C7V6 817 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 NCAM1P13591 858 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 ASPSCR1Q9BZE9 553 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 TMX2Q9Y320 296 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 UGP2Q16851 508 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 NBPF9Q3BBW0 867 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 FBXO16Q8IX29 292 aaPredicted RBP26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 GSPT2Q8IYD1 628 aaKnown RBP26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 KLK14Q9P0G3 267 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 APRTP07741 180 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 RALBP11234 206 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 GMCL1Q96IK5 515 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 CPA4Q9UI42 421 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 FAF1Q9UNN5 650 aaPredicted RBP26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 CLCA2Q9UQC9 943 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 KCNA4P22459 653 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 FBXO38Q6PIJ6 1188 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 RTFDC1Q9BY42 306 aaPredicted RBP26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 VCAM1P19320 739 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 MUTP22033 750 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 MAP2K2P36507 400 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 ANKMY2Q8IV38 441 aa26.3■■□□□ 1.8
SPIRE1-202ENST00000409402 USP32Q8NFA0 1604 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 HNRNPCL2B2RXH8 293 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 HNRNPCL1O60812 293 aaKnown RBP26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 STAT4Q14765 748 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 MOXD1Q6UVY6 613 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 HIPK4Q8NE63 616 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 TWF1Q12792 350 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 NBPF12Q5TAG4 269 aaPredicted RBP26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 MTBPQ96DY7 904 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 KPNA6O60684 536 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 SPAG7O75391 227 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 NRBF2Q96F24 287 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 KIFC3Q9BVG8 833 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 AMACRQ9UHK6 382 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 ATP5HO75947 161 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 PPP2R2AP63151 447 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 GRAMD1BQ3KR37 738 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 CYTH2Q99418 400 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 TSPYL2Q9H2G4 693 aaPredicted RBP26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 RAB6BQ9NRW1 208 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 ARHGEF38Q9NXL2 777 aa26.29■■□□□ 1.8
SPIRE1-202ENST00000409402 TMEM132BQ14DG7 1078 aa26.28■■□□□ 1.8
SPIRE1-202ENST00000409402 TEDDM1Q5T9Z0 273 aa26.28■■□□□ 1.8
SPIRE1-202ENST00000409402 RSAD1Q9HA92 442 aa26.28■■□□□ 1.8
SPIRE1-202ENST00000409402 NKRFO15226 690 aaKnown RBP eCLIP26.28■■□□□ 1.8
SPIRE1-202ENST00000409402 NAB2Q15742 525 aa26.28■■□□□ 1.8
SPIRE1-202ENST00000409402 ATP6V0D2Q8N8Y2 350 aa26.28■■□□□ 1.8
SPIRE1-202ENST00000409402 SEPT8Q92599 483 aa26.28■■□□□ 1.8
SPIRE1-202ENST00000409402 PHF2O75151 1096 aa26.28■■□□□ 1.8
SPIRE1-202ENST00000409402 GGCXP38435 758 aa26.28■■□□□ 1.8
SPIRE1-202ENST00000409402 NAMPTP43490 491 aa26.28■■□□□ 1.8
SPIRE1-202ENST00000409402 ARFIP2P53365 341 aa26.28■■□□□ 1.8
SPIRE1-202ENST00000409402 TROAPQ12815 778 aa26.28■■□□□ 1.8
SPIRE1-202ENST00000409402 HAUS5O94927 633 aa26.28■■□□□ 1.8
SPIRE1-202ENST00000409402 SLC9A1P19634 815 aa26.28■■□□□ 1.8
SPIRE1-202ENST00000409402 PTPRN2Q92932 1015 aa26.28■■□□□ 1.8
SPIRE1-202ENST00000409402 ARHGAP10A1A4S6 786 aa26.28■■□□□ 1.8
SPIRE1-202ENST00000409402 PI4K2AQ9BTU6 479 aa26.28■■□□□ 1.8
SPIRE1-202ENST00000409402 OGTO15294 1046 aa26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 RGL2O15211 777 aa26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 CYP2C8P10632 490 aa26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 SLC2A3P11169 496 aa26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 HMOX2P30519 316 aa26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 AARSP49588 968 aaKnown RBP eCLIP26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 VCPP55072 806 aaKnown RBP26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 TGS1Q96RS0 853 aaKnown RBP26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 MLXIPLQ9NP71 852 aa26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 STARD7Q9NQZ5 370 aa26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 FAM95CA0A1B0GW59 222 aa26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 SLC37A4O43826 429 aa26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 PDCLQ13371 301 aa26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 HIBCHQ6NVY1 386 aaPredicted RBP26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 DPF2Q92785 391 aa26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 LRRC37BQ96QE4 947 aa26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 RRP15Q9Y3B9 282 aaKnown RBP26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 PNMA6AP0CW24 399 aaPredicted RBP26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 PCSK7Q16549 785 aa26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 RRAGCQ9HB90 399 aa26.27■■□□□ 1.8
SPIRE1-202ENST00000409402 ENTPD7Q9NQZ7 604 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms