RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 NT5C1BQ96P26 610 aa14□□□□□ -0.17
LIMS2-203ENST00000409254 TRIM5Q9C035 493 aa14□□□□□ -0.17
LIMS2-203ENST00000409254 XPO4Q9C0E2 1151 aaKnown RBP14□□□□□ -0.17
LIMS2-203ENST00000409254 CXCL16Q9H2A7 254 aa14□□□□□ -0.17
LIMS2-203ENST00000409254 CYP3A43Q9HB55 503 aa14□□□□□ -0.17
LIMS2-203ENST00000409254 IFNKQ9P0W0 207 aa14□□□□□ -0.17
LIMS2-203ENST00000409254 ADAM28Q9UKQ2 775 aa14□□□□□ -0.17
LIMS2-203ENST00000409254 MYO6Q9UM54 1294 aa14□□□□□ -0.17
LIMS2-203ENST00000409254 AGAP1Q9UPQ3 857 aa14□□□□□ -0.17
LIMS2-203ENST00000409254 LZTS1Q9Y250 596 aa14□□□□□ -0.17
LIMS2-203ENST00000409254 FAN1Q9Y2M0 1017 aa14□□□□□ -0.17
LIMS2-203ENST00000409254 PCDHB12Q9Y5F1 795 aa14□□□□□ -0.17
LIMS2-203ENST00000409254 COL4A4P53420 1690 aaPredicted RBP14□□□□□ -0.17
LIMS2-203ENST00000409254 KPNA7A9QM74 516 aa13.99□□□□□ -0.17
LIMS2-203ENST00000409254 NRP1O14786 923 aa13.99□□□□□ -0.17
LIMS2-203ENST00000409254 B3GAT3O94766 335 aa13.99□□□□□ -0.17
LIMS2-203ENST00000409254 EFEMP2O95967 443 aa13.99□□□□□ -0.17
LIMS2-203ENST00000409254 CYP11A1P05108 521 aa13.99□□□□□ -0.17
LIMS2-203ENST00000409254 TYMPP19971 482 aa13.99□□□□□ -0.17
LIMS2-203ENST00000409254 PON1P27169 355 aa13.99□□□□□ -0.17
LIMS2-203ENST00000409254 PLCB3Q01970 1234 aa13.99□□□□□ -0.17
LIMS2-203ENST00000409254 UBE3AQ05086 875 aa13.99□□□□□ -0.17
LIMS2-203ENST00000409254 PDXDC1Q6P996 788 aa13.99□□□□□ -0.17
LIMS2-203ENST00000409254 KCNT2Q6UVM3 1135 aa13.99□□□□□ -0.17
LIMS2-203ENST00000409254 RNF168Q8IYW5 571 aaPredicted RBP13.99□□□□□ -0.17
LIMS2-203ENST00000409254 COLGALT1Q8NBJ5 622 aa13.99□□□□□ -0.17
LIMS2-203ENST00000409254 BCO2Q9BYV7 579 aa13.99□□□□□ -0.17
LIMS2-203ENST00000409254 DNAI2Q9GZS0 605 aa13.99□□□□□ -0.17
LIMS2-203ENST00000409254 INTS2Q9H0H0 1204 aaKnown RBP13.99□□□□□ -0.17
LIMS2-203ENST00000409254 SPG21Q9NZD8 308 aa13.99□□□□□ -0.17
LIMS2-203ENST00000409254 MSRAQ9UJ68 235 aa13.99□□□□□ -0.17
LIMS2-203ENST00000409254 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.99□□□□□ -0.17
LIMS2-203ENST00000409254 MRPL42Q9Y6G3 142 aaKnown RBP13.99□□□□□ -0.17
LIMS2-203ENST00000409254 A0A1W2PQJ5 194 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 LINC01553A4QN01 128 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 CASTOR2A6NHX0 329 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 TACC1O75410 805 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 KIF4AO95239 1232 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 KRT19P08727 400 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 ODC1P11926 461 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 OR1G1P47890 313 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 SLC11A1P49279 550 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 GATMP50440 423 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 MYL6P60660 151 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 TNNC1P63316 161 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 SYCP1Q15431 976 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 PAN2Q504Q3 1202 aaKnown RBP13.98□□□□□ -0.17
LIMS2-203ENST00000409254 SPECC1LQ69YQ0 1117 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.98□□□□□ -0.17
LIMS2-203ENST00000409254 SLC39A11Q8N1S5 342 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 SEMA4DQ92854 862 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 TMEM169Q96HH4 297 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 IGSF21Q96ID5 467 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 NAP1L5Q96NT1 182 aaPredicted RBP13.98□□□□□ -0.17
LIMS2-203ENST00000409254 NUCKS1Q9H1E3 243 aaKnown RBP13.98□□□□□ -0.17
LIMS2-203ENST00000409254 MMRN2Q9H8L6 949 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 GOLGA2P5Q9HBQ8 144 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 CEP72Q9P209 647 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 DNAJB4Q9UDY4 337 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 NUB1Q9Y5A7 615 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 PATJQ8NI35 1801 aa13.98□□□□□ -0.17
LIMS2-203ENST00000409254 B4GALT3O60512 393 aa13.97□□□□□ -0.17
LIMS2-203ENST00000409254 CST3P01034 146 aaPredicted RBP13.97□□□□□ -0.17
LIMS2-203ENST00000409254 TRIM21P19474 475 aaKnown RBP13.97□□□□□ -0.17
LIMS2-203ENST00000409254 IBSPP21815 317 aaPredicted RBP13.97□□□□□ -0.17
LIMS2-203ENST00000409254 ZNF75DP51815 510 aa13.97□□□□□ -0.17
LIMS2-203ENST00000409254 MFAP3P55082 362 aa13.97□□□□□ -0.17
LIMS2-203ENST00000409254 ERVK-21P61565 698 aa13.97□□□□□ -0.17
LIMS2-203ENST00000409254 CREMQ03060 361 aa13.97□□□□□ -0.17
LIMS2-203ENST00000409254 INCA1Q0VD86 236 aa13.97□□□□□ -0.17
LIMS2-203ENST00000409254 KCNMA1Q12791 1236 aa13.97□□□□□ -0.17
LIMS2-203ENST00000409254 KLHDC7AQ5VTJ3 777 aa13.97□□□□□ -0.17
LIMS2-203ENST00000409254 VSTM4Q8IW00 320 aa13.97□□□□□ -0.17
LIMS2-203ENST00000409254 APPL2Q8NEU8 664 aa13.97□□□□□ -0.17
LIMS2-203ENST00000409254 NEK11Q8NG66 645 aa13.97□□□□□ -0.17
LIMS2-203ENST00000409254 ANP32BQ92688 251 aaKnown RBP13.97□□□□□ -0.17
LIMS2-203ENST00000409254 TGS1Q96RS0 853 aaKnown RBP13.97□□□□□ -0.17
LIMS2-203ENST00000409254 C11orf84Q9BUA3 381 aaPredicted RBP13.97□□□□□ -0.17
LIMS2-203ENST00000409254 MARCH5Q9NX47 278 aa13.97□□□□□ -0.17
LIMS2-203ENST00000409254 PCDHB8Q9UN66 801 aa13.97□□□□□ -0.17
LIMS2-203ENST00000409254 TEX33O43247 280 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 HUS1O60921 280 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 C1RP00736 705 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 TPM1P09493 284 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 UCHL3P15374 230 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 BMPR1AP36894 532 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 ASPAP45381 313 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 GUCY2FP51841 1108 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 KRT17Q04695 432 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 CUL2Q13617 745 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 WDR72Q3MJ13 1102 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 SPOUT1Q5T280 376 aaKnown RBP13.96□□□□□ -0.17
LIMS2-203ENST00000409254 PDE12Q6L8Q7 609 aaKnown RBP13.96□□□□□ -0.17
LIMS2-203ENST00000409254 DPY19L2P1Q6NXN4 242 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 FAM117BQ6P1L5 589 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 FUT10Q6P4F1 479 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 CD300LGQ6UXG3 332 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 DDX53Q86TM3 631 aaKnown RBP13.96□□□□□ -0.17
LIMS2-203ENST00000409254 UNC93AQ86WB7 457 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 C3orf58Q8NDZ4 430 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms