RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 PNOCQ13519 176 aa19.39■□□□□ 0.69
PDLIM2-206ENST00000409141 KCNB1Q14721 858 aa19.39■□□□□ 0.69
PDLIM2-206ENST00000409141 SNRNP35Q16560 246 aaKnown RBP19.39■□□□□ 0.69
PDLIM2-206ENST00000409141 SLC8B1Q6J4K2 584 aa19.39■□□□□ 0.69
PDLIM2-206ENST00000409141 ZNF280DQ6N043 979 aa19.39■□□□□ 0.69
PDLIM2-206ENST00000409141 C15orf39Q6ZRI6 1047 aa19.39■□□□□ 0.69
PDLIM2-206ENST00000409141 USP37Q86T82 979 aa19.39■□□□□ 0.69
PDLIM2-206ENST00000409141 C12orf56Q8IXR9 622 aa19.39■□□□□ 0.69
PDLIM2-206ENST00000409141 SENP8Q96LD8 212 aa19.39■□□□□ 0.69
PDLIM2-206ENST00000409141 POMKQ9H5K3 350 aa19.39■□□□□ 0.69
PDLIM2-206ENST00000409141 FBXL5Q9UKA1 691 aa19.39■□□□□ 0.69
PDLIM2-206ENST00000409141 FBXW11Q9UKB1 542 aa19.39■□□□□ 0.69
PDLIM2-206ENST00000409141 TBC1D4O60343 1298 aa19.38■□□□□ 0.69
PDLIM2-206ENST00000409141 EXOC3O60645 756 aa19.38■□□□□ 0.69
PDLIM2-206ENST00000409141 ZMYND10O75800 440 aa19.38■□□□□ 0.69
PDLIM2-206ENST00000409141 TMEM191BP0C7N4 346 aa19.38■□□□□ 0.69
PDLIM2-206ENST00000409141 TAF6P49848 677 aa19.38■□□□□ 0.69
PDLIM2-206ENST00000409141 YWHAHQ04917 246 aaPredicted RBP19.38■□□□□ 0.69
PDLIM2-206ENST00000409141 LIN9Q5TKA1 542 aa19.38■□□□□ 0.69
PDLIM2-206ENST00000409141 LMBRD2Q68DH5 695 aaPredicted RBP19.38■□□□□ 0.69
PDLIM2-206ENST00000409141 CSGALNACT2Q8N6G5 542 aa19.38■□□□□ 0.69
PDLIM2-206ENST00000409141 TSHZ2Q9NRE2 1034 aa19.38■□□□□ 0.69
PDLIM2-206ENST00000409141 ZDHHC7Q9NXF8 308 aa19.38■□□□□ 0.69
PDLIM2-206ENST00000409141 AGAP1Q9UPQ3 857 aa19.38■□□□□ 0.69
PDLIM2-206ENST00000409141 ANK1P16157 1881 aa19.38■□□□□ 0.69
PDLIM2-206ENST00000409141 PLXNA3P51805 1871 aa19.38■□□□□ 0.69
PDLIM2-206ENST00000409141 LOC730098B7Z3J9 87 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 PDXKO00764 312 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 GADD45BO75293 160 aaPredicted RBP19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 OAZ2O95190 189 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 ITGB3P05106 788 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 ODC1P11926 461 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 TYMPP19971 482 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 SP100P23497 879 aaPredicted RBP19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 ROR1Q01973 937 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 CYP26C1Q6V0L0 522 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 C1orf127Q8N9H9 656 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 ZNF461Q8TAF7 563 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 SMG7Q92540 1137 aaKnown RBP19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 ANKRD36BP1Q96IX9 119 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 FAM84AQ96KN4 292 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 TIGD1Q96MW7 591 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 PRKD2Q9BZL6 878 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 KCTD10Q9H3F6 313 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 PIDD1Q9HB75 910 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 INTS13Q9NVM9 706 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 HOOK1Q9UJC3 728 aaKnown RBP19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 ITGA11Q9UKX5 1188 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 MAPK8IP1Q9UQF2 711 aa19.37■□□□□ 0.69
PDLIM2-206ENST00000409141 ARHGEF37A1IGU5 675 aa19.36■□□□□ 0.69
PDLIM2-206ENST00000409141 TNNC2P02585 160 aa19.36■□□□□ 0.69
PDLIM2-206ENST00000409141 C8AP07357 584 aa19.36■□□□□ 0.69
PDLIM2-206ENST00000409141 KRT19P08727 400 aa19.36■□□□□ 0.69
PDLIM2-206ENST00000409141 POLR2BP30876 1174 aaKnown RBP19.36■□□□□ 0.69
PDLIM2-206ENST00000409141 CYP24A1Q07973 514 aa19.36■□□□□ 0.69
PDLIM2-206ENST00000409141 DUOXA2Q1HG44 320 aa19.36■□□□□ 0.69
PDLIM2-206ENST00000409141 SV2CQ496J9 727 aa19.36■□□□□ 0.69
PDLIM2-206ENST00000409141 PPM1LQ5SGD2 360 aa19.36■□□□□ 0.69
PDLIM2-206ENST00000409141 OVOS1Q6IE37 1185 aa19.36■□□□□ 0.69
PDLIM2-206ENST00000409141 ZNF560Q96MR9 790 aa19.36■□□□□ 0.69
PDLIM2-206ENST00000409141 FNBP1Q96RU3 617 aa19.36■□□□□ 0.69
PDLIM2-206ENST00000409141 MTMR12Q9C0I1 747 aa19.36■□□□□ 0.69
PDLIM2-206ENST00000409141 R3HCC1Q9Y3T6 440 aaKnown RBP19.36■□□□□ 0.69
PDLIM2-206ENST00000409141 NR2E1Q9Y466 385 aa19.36■□□□□ 0.69
PDLIM2-206ENST00000409141 WDR27A2RRH5 827 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 KPNA7A9QM74 516 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 CYB561D2O14569 222 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 ABLIM3O94929 683 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 SMC2O95347 1197 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 DLATP10515 647 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 TNNI1P19237 187 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 ELF1P32519 619 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 PNPLA4P41247 253 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 RBP5P82980 135 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 PSMD6Q15008 389 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 UVSSAQ2YD98 709 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 CCDC149Q6ZUS6 474 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 WDR49Q8IV35 697 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 OR5B17Q8NGF7 314 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 SLC7A14Q8TBB6 771 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 CCDC127Q96BQ5 260 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 ZNF707Q96C28 371 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 OXCT2Q9BYC2 517 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 RHOBTB2Q9BYZ6 727 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 RMND1Q9NWS8 449 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 PTPRJQ12913 1337 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 CALUO43852 315 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 KINO60870 393 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 HNRNPA1P09651 372 aaKnown RBP eCLIP19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 CPB1P15086 417 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 TPGS2Q68CL5 300 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 METTL23Q86XA0 190 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 RNF135Q8IUD6 432 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 SLC9A9Q8IVB4 645 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 GUF1Q8N442 669 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 KHSRPQ92945 711 aaKnown RBP eCLIP19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 BORCS6Q96GS4 357 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 MFSD14AQ96MC6 490 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 GSDMAQ96QA5 445 aa19.35■□□□□ 0.69
PDLIM2-206ENST00000409141 DMAC2Q9NW81 257 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms